Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0689:0690
Extra
PDB:
ATOM 1 O3' A A 688 33.308 61.709 41.962 1.00 53.23 O
ATOM 2 P U A 689 33.236 60.155 42.364 1.00 54.20 P
ATOM 3 OP1 U A 689 33.577 59.351 41.162 1.00 54.13 O
ATOM 4 OP2 U A 689 31.935 59.937 43.045 1.00 55.00 O
ATOM 5 O5' U A 689 34.395 59.999 43.444 1.00 53.66 O
ATOM 6 C5' U A 689 35.456 59.046 43.276 1.00 57.96 C
ATOM 7 C4' U A 689 35.576 58.192 44.514 1.00 62.19 C
ATOM 8 O4' U A 689 35.899 59.033 45.658 1.00 63.57 O
ATOM 9 C3' U A 689 34.304 57.445 44.902 1.00 64.27 C
ATOM 10 O3' U A 689 34.690 56.267 45.586 1.00 66.63 O
ATOM 11 C2' U A 689 33.645 58.401 45.889 1.00 63.92 C
ATOM 12 O2' U A 689 32.767 57.762 46.794 1.00 64.05 O
ATOM 13 C1' U A 689 34.867 58.942 46.626 1.00 63.86 C
ATOM 14 N1 U A 689 34.679 60.268 47.234 1.00 64.80 N
ATOM 15 C2 U A 689 34.896 60.384 48.595 1.00 65.35 C
ATOM 16 O2 U A 689 35.193 59.434 49.307 1.00 65.10 O
ATOM 17 N3 U A 689 34.750 61.654 49.097 1.00 66.01 N
ATOM 18 C4 U A 689 34.409 62.794 48.396 1.00 65.10 C
ATOM 19 O4 U A 689 34.390 63.877 48.980 1.00 64.40 O
ATOM 20 C5 U A 689 34.173 62.589 47.002 1.00 64.07 C
ATOM 21 C6 U A 689 34.313 61.368 46.480 1.00 64.72 C
ATOM 22 P G A 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 23 OP1 G A 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 24 OP2 G A 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 25 O5' G A 690 34.345 53.959 46.418 1.00 67.68 O
TER
ATOM 1 O3' U B 689 34.690 56.267 45.586 1.00 66.63 O
ATOM 2 P G B 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 3 OP1 G B 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 4 OP2 G B 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 5 O5' G B 690 34.345 53.959 46.418 1.00 67.68 O
ATOM 6 C5' G B 690 34.704 52.576 46.339 1.00 67.07 C
ATOM 7 C4' G B 690 35.230 52.096 47.670 1.00 66.64 C
ATOM 8 O4' G B 690 36.538 52.668 47.932 1.00 66.93 O
ATOM 9 C3' G B 690 34.428 52.483 48.900 1.00 65.80 C
ATOM 10 O3' G B 690 33.263 51.685 49.063 1.00 65.16 O
ATOM 11 C2' G B 690 35.451 52.268 50.007 1.00 67.22 C
ATOM 12 O2' G B 690 35.635 50.911 50.351 1.00 67.86 O
ATOM 13 C1' G B 690 36.724 52.790 49.335 1.00 68.27 C
ATOM 14 N9 G B 690 36.952 54.193 49.670 1.00 69.87 N
ATOM 15 C8 G B 690 36.760 55.297 48.874 1.00 69.36 C
ATOM 16 N7 G B 690 37.006 56.421 49.491 1.00 70.09 N
ATOM 17 C5 G B 690 37.398 56.035 50.766 1.00 70.76 C
ATOM 18 C6 G B 690 37.785 56.816 51.893 1.00 71.52 C
ATOM 19 O6 G B 690 37.862 58.049 51.992 1.00 72.02 O
ATOM 20 N1 G B 690 38.099 56.012 52.985 1.00 70.81 N
ATOM 21 C2 G B 690 38.044 54.641 53.000 1.00 70.23 C
ATOM 22 N2 G B 690 38.372 54.045 54.150 1.00 71.20 N
ATOM 23 N3 G B 690 37.689 53.906 51.963 1.00 70.19 N
ATOM 24 C4 G B 690 37.381 54.663 50.888 1.00 70.31 C
ATOM 25 P G B 691 32.076 52.194 50.021 1.00 64.67 P
ATOM 26 OP1 G B 691 30.953 51.241 49.877 1.00 65.65 O
ATOM 27 OP2 G B 691 31.842 53.639 49.784 1.00 65.22 O
ATOM 28 O5' G B 691 32.678 52.005 51.481 1.00 63.86 O
TER
ATOM 2 P U A 689 33.236 60.155 42.364 1.00 54.20 P
ATOM 3 OP1 U A 689 33.577 59.351 41.162 1.00 54.13 O
ATOM 4 OP2 U A 689 31.935 59.937 43.045 1.00 55.00 O
ATOM 5 O5' U A 689 34.395 59.999 43.444 1.00 53.66 O
ATOM 6 C5' U A 689 35.456 59.046 43.276 1.00 57.96 C
ATOM 7 C4' U A 689 35.576 58.192 44.514 1.00 62.19 C
ATOM 8 O4' U A 689 35.899 59.033 45.658 1.00 63.57 O
ATOM 9 C3' U A 689 34.304 57.445 44.902 1.00 64.27 C
ATOM 10 O3' U A 689 34.690 56.267 45.586 1.00 66.63 O
ATOM 11 C2' U A 689 33.645 58.401 45.889 1.00 63.92 C
ATOM 12 O2' U A 689 32.767 57.762 46.794 1.00 64.05 O
ATOM 13 C1' U A 689 34.867 58.942 46.626 1.00 63.86 C
ATOM 14 N1 U A 689 34.679 60.268 47.234 1.00 64.80 N
ATOM 15 C2 U A 689 34.896 60.384 48.595 1.00 65.35 C
ATOM 16 O2 U A 689 35.193 59.434 49.307 1.00 65.10 O
ATOM 17 N3 U A 689 34.750 61.654 49.097 1.00 66.01 N
ATOM 18 C4 U A 689 34.409 62.794 48.396 1.00 65.10 C
ATOM 19 O4 U A 689 34.390 63.877 48.980 1.00 64.40 O
ATOM 20 C5 U A 689 34.173 62.589 47.002 1.00 64.07 C
ATOM 21 C6 U A 689 34.313 61.368 46.480 1.00 64.72 C
ATOM 22 P G A 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 23 OP1 G A 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 24 OP2 G A 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 25 O5' G A 690 34.345 53.959 46.418 1.00 67.68 O
TER
ATOM 1 O3' U B 689 34.690 56.267 45.586 1.00 66.63 O
ATOM 2 P G B 690 34.142 54.841 45.107 1.00 67.87 P
ATOM 3 OP1 G B 690 35.069 54.365 44.043 1.00 66.09 O
ATOM 4 OP2 G B 690 32.682 54.947 44.825 1.00 65.52 O
ATOM 5 O5' G B 690 34.345 53.959 46.418 1.00 67.68 O
ATOM 6 C5' G B 690 34.704 52.576 46.339 1.00 67.07 C
ATOM 7 C4' G B 690 35.230 52.096 47.670 1.00 66.64 C
ATOM 8 O4' G B 690 36.538 52.668 47.932 1.00 66.93 O
ATOM 9 C3' G B 690 34.428 52.483 48.900 1.00 65.80 C
ATOM 10 O3' G B 690 33.263 51.685 49.063 1.00 65.16 O
ATOM 11 C2' G B 690 35.451 52.268 50.007 1.00 67.22 C
ATOM 12 O2' G B 690 35.635 50.911 50.351 1.00 67.86 O
ATOM 13 C1' G B 690 36.724 52.790 49.335 1.00 68.27 C
ATOM 14 N9 G B 690 36.952 54.193 49.670 1.00 69.87 N
ATOM 15 C8 G B 690 36.760 55.297 48.874 1.00 69.36 C
ATOM 16 N7 G B 690 37.006 56.421 49.491 1.00 70.09 N
ATOM 17 C5 G B 690 37.398 56.035 50.766 1.00 70.76 C
ATOM 18 C6 G B 690 37.785 56.816 51.893 1.00 71.52 C
ATOM 19 O6 G B 690 37.862 58.049 51.992 1.00 72.02 O
ATOM 20 N1 G B 690 38.099 56.012 52.985 1.00 70.81 N
ATOM 21 C2 G B 690 38.044 54.641 53.000 1.00 70.23 C
ATOM 22 N2 G B 690 38.372 54.045 54.150 1.00 71.20 N
ATOM 23 N3 G B 690 37.689 53.906 51.963 1.00 70.19 N
ATOM 24 C4 G B 690 37.381 54.663 50.888 1.00 70.31 C
ATOM 25 P G B 691 32.076 52.194 50.021 1.00 64.67 P
ATOM 26 OP1 G B 691 30.953 51.241 49.877 1.00 65.65 O
ATOM 27 OP2 G B 691 31.842 53.639 49.784 1.00 65.22 O
ATOM 28 O5' G B 691 32.678 52.005 51.481 1.00 63.86 O
TER
Atoms:
C4: (34.409,62.794,48.396)
N3: (34.750,61.654,49.097)
OP1: (33.577,59.351,41.162)
OP2: (31.935,59.937,43.045)
C2: (34.896,60.384,48.595)
C1': (34.867,58.942,46.626)
C3': (34.304,57.445,44.902)
O5': (34.395,59.999,43.444)
O4': (35.899,59.033,45.658)
C5': (35.456,59.046,43.276)
P: (33.236,60.155,42.364)
C4': (35.576,58.192,44.514)
C2': (33.645,58.401,45.889)
O2': (32.767,57.762,46.794)
N1: (34.679,60.268,47.234)
O4: (34.390,63.877,48.980)
O2: (35.193,59.434,49.307)
C6: (34.313,61.368,46.480)
C5: (34.173,62.589,47.002)
O3': (34.690,56.267,45.586)
N3: (34.750,61.654,49.097)
OP1: (33.577,59.351,41.162)
OP2: (31.935,59.937,43.045)
C2: (34.896,60.384,48.595)
C1': (34.867,58.942,46.626)
C3': (34.304,57.445,44.902)
O5': (34.395,59.999,43.444)
O4': (35.899,59.033,45.658)
C5': (35.456,59.046,43.276)
P: (33.236,60.155,42.364)
C4': (35.576,58.192,44.514)
C2': (33.645,58.401,45.889)
O2': (32.767,57.762,46.794)
N1: (34.679,60.268,47.234)
O4: (34.390,63.877,48.980)
O2: (35.193,59.434,49.307)
C6: (34.313,61.368,46.480)
C5: (34.173,62.589,47.002)
O3': (34.690,56.267,45.586)
OP1: (35.069,54.365,44.043)
OP2: (32.682,54.947,44.825)
C3': (34.428,52.483,48.900)
C1': (36.724,52.790,49.335)
C5': (34.704,52.576,46.339)
O6: (37.862,58.049,51.992)
O4': (36.538,52.668,47.932)
C8: (36.760,55.297,48.874)
C2: (38.044,54.641,53.000)
C6: (37.785,56.816,51.893)
C5: (37.398,56.035,50.766)
C4: (37.381,54.663,50.888)
P: (34.142,54.841,45.107)
C4': (35.230,52.096,47.670)
C2': (35.451,52.268,50.007)
O2': (35.635,50.911,50.351)
N1: (38.099,56.012,52.985)
N2: (38.372,54.045,54.150)
N3: (37.689,53.906,51.963)
N7: (37.006,56.421,49.491)
N9: (36.952,54.193,49.670)
O5': (34.345,53.959,46.418)
O3': (33.263,51.685,49.063)
OP2: (32.682,54.947,44.825)
C3': (34.428,52.483,48.900)
C1': (36.724,52.790,49.335)
C5': (34.704,52.576,46.339)
O6: (37.862,58.049,51.992)
O4': (36.538,52.668,47.932)
C8: (36.760,55.297,48.874)
C2: (38.044,54.641,53.000)
C6: (37.785,56.816,51.893)
C5: (37.398,56.035,50.766)
C4: (37.381,54.663,50.888)
P: (34.142,54.841,45.107)
C4': (35.230,52.096,47.670)
C2': (35.451,52.268,50.007)
O2': (35.635,50.911,50.351)
N1: (38.099,56.012,52.985)
N2: (38.372,54.045,54.150)
N3: (37.689,53.906,51.963)
N7: (37.006,56.421,49.491)
N9: (36.952,54.193,49.670)
O5': (34.345,53.959,46.418)
O3': (33.263,51.685,49.063)
Image (generated by PyMOL):