Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0129:0130
Extra
PDB:
ATOM 1 O3' G A 128 93.448 148.850 15.862 1.00 59.15 O
ATOM 2 P C A 129 92.858 148.153 17.176 1.00 57.92 P
ATOM 3 OP1 C A 129 93.617 148.664 18.349 1.00 55.51 O
ATOM 4 OP2 C A 129 92.799 146.685 16.917 1.00 57.64 O
ATOM 5 O5' C A 129 91.371 148.716 17.250 1.00 55.90 O
ATOM 6 C5' C A 129 90.393 148.056 18.046 1.00 54.49 C
ATOM 7 C4' C A 129 89.222 147.654 17.197 1.00 54.17 C
ATOM 8 O4' C A 129 88.722 146.383 17.669 1.00 55.73 O
ATOM 9 C3' C A 129 88.033 148.603 17.185 1.00 53.95 C
ATOM 10 O3' C A 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 11 C2' C A 129 87.167 148.024 18.301 1.00 54.63 C
ATOM 12 O2' C A 129 85.800 148.345 18.159 1.00 54.16 O
ATOM 13 C1' C A 129 87.382 146.525 18.083 1.00 56.10 C
ATOM 14 N1 C A 129 87.171 145.609 19.221 1.00 57.57 N
ATOM 15 C2 C A 129 87.282 144.231 18.982 1.00 58.76 C
ATOM 16 O2 C A 129 87.524 143.834 17.825 1.00 59.50 O
ATOM 17 N3 C A 129 87.122 143.367 20.009 1.00 58.40 N
ATOM 18 C4 C A 129 86.853 143.824 21.229 1.00 56.84 C
ATOM 19 N4 C A 129 86.709 142.930 22.207 1.00 57.17 N
ATOM 20 C5 C A 129 86.722 145.218 21.500 1.00 57.17 C
ATOM 21 C6 C A 129 86.888 146.067 20.478 1.00 56.92 C
ATOM 22 P G A 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 23 OP1 G A 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 24 OP2 G A 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 25 O5' G A 130 86.039 149.155 13.944 1.00 51.15 O
TER
ATOM 1 O3' C B 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 2 P G B 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 3 OP1 G B 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 4 OP2 G B 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 5 O5' G B 130 86.039 149.155 13.944 1.00 51.15 O
ATOM 6 C5' G B 130 85.933 149.675 12.616 1.00 49.83 C
ATOM 7 C4' G B 130 85.782 148.546 11.625 1.00 48.70 C
ATOM 8 O4' G B 130 87.033 147.832 11.471 1.00 50.06 O
ATOM 9 C3' G B 130 84.802 147.466 12.025 1.00 48.25 C
ATOM 10 O3' G B 130 83.474 147.845 11.742 1.00 48.02 O
ATOM 11 C2' G B 130 85.251 146.287 11.181 1.00 49.02 C
ATOM 12 O2' G B 130 84.793 146.390 9.852 1.00 49.08 O
ATOM 13 C1' G B 130 86.768 146.464 11.211 1.00 49.36 C
ATOM 14 N9 G B 130 87.444 145.657 12.223 1.00 51.21 N
ATOM 15 C8 G B 130 88.193 146.103 13.290 1.00 51.35 C
ATOM 16 N7 G B 130 88.735 145.133 13.975 1.00 52.01 N
ATOM 17 C5 G B 130 88.304 143.976 13.334 1.00 52.09 C
ATOM 18 C6 G B 130 88.581 142.608 13.610 1.00 51.33 C
ATOM 19 O6 G B 130 89.302 142.127 14.493 1.00 50.55 O
ATOM 20 N1 G B 130 87.925 141.766 12.718 1.00 50.69 N
ATOM 21 C2 G B 130 87.117 142.178 11.691 1.00 51.16 C
ATOM 22 N2 G B 130 86.566 141.211 10.946 1.00 52.21 N
ATOM 23 N3 G B 130 86.863 143.444 11.413 1.00 51.94 N
ATOM 24 C4 G B 130 87.486 144.283 12.268 1.00 51.86 C
ATOM 25 P C B 131 82.286 147.195 12.588 1.00 47.94 P
ATOM 26 OP1 C B 131 81.005 147.772 12.119 1.00 47.65 O
ATOM 27 OP2 C B 131 82.658 147.285 14.031 1.00 46.36 O
ATOM 28 O5' C B 131 82.315 145.676 12.127 1.00 46.86 O
TER
ATOM 2 P C A 129 92.858 148.153 17.176 1.00 57.92 P
ATOM 3 OP1 C A 129 93.617 148.664 18.349 1.00 55.51 O
ATOM 4 OP2 C A 129 92.799 146.685 16.917 1.00 57.64 O
ATOM 5 O5' C A 129 91.371 148.716 17.250 1.00 55.90 O
ATOM 6 C5' C A 129 90.393 148.056 18.046 1.00 54.49 C
ATOM 7 C4' C A 129 89.222 147.654 17.197 1.00 54.17 C
ATOM 8 O4' C A 129 88.722 146.383 17.669 1.00 55.73 O
ATOM 9 C3' C A 129 88.033 148.603 17.185 1.00 53.95 C
ATOM 10 O3' C A 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 11 C2' C A 129 87.167 148.024 18.301 1.00 54.63 C
ATOM 12 O2' C A 129 85.800 148.345 18.159 1.00 54.16 O
ATOM 13 C1' C A 129 87.382 146.525 18.083 1.00 56.10 C
ATOM 14 N1 C A 129 87.171 145.609 19.221 1.00 57.57 N
ATOM 15 C2 C A 129 87.282 144.231 18.982 1.00 58.76 C
ATOM 16 O2 C A 129 87.524 143.834 17.825 1.00 59.50 O
ATOM 17 N3 C A 129 87.122 143.367 20.009 1.00 58.40 N
ATOM 18 C4 C A 129 86.853 143.824 21.229 1.00 56.84 C
ATOM 19 N4 C A 129 86.709 142.930 22.207 1.00 57.17 N
ATOM 20 C5 C A 129 86.722 145.218 21.500 1.00 57.17 C
ATOM 21 C6 C A 129 86.888 146.067 20.478 1.00 56.92 C
ATOM 22 P G A 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 23 OP1 G A 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 24 OP2 G A 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 25 O5' G A 130 86.039 149.155 13.944 1.00 51.15 O
TER
ATOM 1 O3' C B 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 2 P G B 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 3 OP1 G B 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 4 OP2 G B 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 5 O5' G B 130 86.039 149.155 13.944 1.00 51.15 O
ATOM 6 C5' G B 130 85.933 149.675 12.616 1.00 49.83 C
ATOM 7 C4' G B 130 85.782 148.546 11.625 1.00 48.70 C
ATOM 8 O4' G B 130 87.033 147.832 11.471 1.00 50.06 O
ATOM 9 C3' G B 130 84.802 147.466 12.025 1.00 48.25 C
ATOM 10 O3' G B 130 83.474 147.845 11.742 1.00 48.02 O
ATOM 11 C2' G B 130 85.251 146.287 11.181 1.00 49.02 C
ATOM 12 O2' G B 130 84.793 146.390 9.852 1.00 49.08 O
ATOM 13 C1' G B 130 86.768 146.464 11.211 1.00 49.36 C
ATOM 14 N9 G B 130 87.444 145.657 12.223 1.00 51.21 N
ATOM 15 C8 G B 130 88.193 146.103 13.290 1.00 51.35 C
ATOM 16 N7 G B 130 88.735 145.133 13.975 1.00 52.01 N
ATOM 17 C5 G B 130 88.304 143.976 13.334 1.00 52.09 C
ATOM 18 C6 G B 130 88.581 142.608 13.610 1.00 51.33 C
ATOM 19 O6 G B 130 89.302 142.127 14.493 1.00 50.55 O
ATOM 20 N1 G B 130 87.925 141.766 12.718 1.00 50.69 N
ATOM 21 C2 G B 130 87.117 142.178 11.691 1.00 51.16 C
ATOM 22 N2 G B 130 86.566 141.211 10.946 1.00 52.21 N
ATOM 23 N3 G B 130 86.863 143.444 11.413 1.00 51.94 N
ATOM 24 C4 G B 130 87.486 144.283 12.268 1.00 51.86 C
ATOM 25 P C B 131 82.286 147.195 12.588 1.00 47.94 P
ATOM 26 OP1 C B 131 81.005 147.772 12.119 1.00 47.65 O
ATOM 27 OP2 C B 131 82.658 147.285 14.031 1.00 46.36 O
ATOM 28 O5' C B 131 82.315 145.676 12.127 1.00 46.86 O
TER
Atoms:
C2: (87.282,144.231,18.982)
OP1: (93.617,148.664,18.349)
OP2: (92.799,146.685,16.917)
C4: (86.853,143.824,21.229)
O5': (91.371,148.716,17.250)
C3': (88.033,148.603,17.185)
C1': (87.382,146.525,18.083)
O4': (88.722,146.383,17.669)
C5': (90.393,148.056,18.046)
P: (92.858,148.153,17.176)
O2: (87.524,143.834,17.825)
C4': (89.222,147.654,17.197)
C2': (87.167,148.024,18.301)
O2': (85.800,148.345,18.159)
N1: (87.171,145.609,19.221)
N3: (87.122,143.367,20.009)
N4: (86.709,142.930,22.207)
C6: (86.888,146.067,20.478)
C5: (86.722,145.218,21.500)
O3': (87.358,148.432,15.942)
OP1: (93.617,148.664,18.349)
OP2: (92.799,146.685,16.917)
C4: (86.853,143.824,21.229)
O5': (91.371,148.716,17.250)
C3': (88.033,148.603,17.185)
C1': (87.382,146.525,18.083)
O4': (88.722,146.383,17.669)
C5': (90.393,148.056,18.046)
P: (92.858,148.153,17.176)
O2: (87.524,143.834,17.825)
C4': (89.222,147.654,17.197)
C2': (87.167,148.024,18.301)
O2': (85.800,148.345,18.159)
N1: (87.171,145.609,19.221)
N3: (87.122,143.367,20.009)
N4: (86.709,142.930,22.207)
C6: (86.888,146.067,20.478)
C5: (86.722,145.218,21.500)
O3': (87.358,148.432,15.942)
OP1: (88.419,149.842,14.160)
OP2: (86.602,150.818,15.717)
C3': (84.802,147.466,12.025)
C1': (86.768,146.464,11.211)
C5': (85.933,149.675,12.616)
O6: (89.302,142.127,14.493)
O4': (87.033,147.832,11.471)
C8: (88.193,146.103,13.290)
C2: (87.117,142.178,11.691)
C6: (88.581,142.608,13.610)
C5: (88.304,143.976,13.334)
C4: (87.486,144.283,12.268)
P: (87.158,149.676,14.945)
C4': (85.782,148.546,11.625)
C2': (85.251,146.287,11.181)
O2': (84.793,146.390,9.852)
N1: (87.925,141.766,12.718)
N2: (86.566,141.211,10.946)
N3: (86.863,143.444,11.413)
N7: (88.735,145.133,13.975)
N9: (87.444,145.657,12.223)
O5': (86.039,149.155,13.944)
O3': (83.474,147.845,11.742)
OP2: (86.602,150.818,15.717)
C3': (84.802,147.466,12.025)
C1': (86.768,146.464,11.211)
C5': (85.933,149.675,12.616)
O6: (89.302,142.127,14.493)
O4': (87.033,147.832,11.471)
C8: (88.193,146.103,13.290)
C2: (87.117,142.178,11.691)
C6: (88.581,142.608,13.610)
C5: (88.304,143.976,13.334)
C4: (87.486,144.283,12.268)
P: (87.158,149.676,14.945)
C4': (85.782,148.546,11.625)
C2': (85.251,146.287,11.181)
O2': (84.793,146.390,9.852)
N1: (87.925,141.766,12.718)
N2: (86.566,141.211,10.946)
N3: (86.863,143.444,11.413)
N7: (88.735,145.133,13.975)
N9: (87.444,145.657,12.223)
O5': (86.039,149.155,13.944)
O3': (83.474,147.845,11.742)
Image (generated by PyMOL):