Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0689:0690
Extra
PDB:
ATOM 1 O3' A A 688 33.624 61.789 42.272 1.00 67.04 O
ATOM 2 P U A 689 33.596 60.247 42.721 1.00 67.87 P
ATOM 3 OP1 U A 689 33.923 59.426 41.526 1.00 67.89 O
ATOM 4 OP2 U A 689 32.322 60.017 43.443 1.00 68.47 O
ATOM 5 O5' U A 689 34.795 60.142 43.763 1.00 68.09 O
ATOM 6 C5' U A 689 35.770 59.093 43.681 1.00 70.62 C
ATOM 7 C4' U A 689 35.754 58.276 44.952 1.00 74.07 C
ATOM 8 O4' U A 689 36.013 59.148 46.090 1.00 74.80 O
ATOM 9 C3' U A 689 34.438 57.568 45.268 1.00 75.51 C
ATOM 10 O3' U A 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 11 C2' U A 689 33.738 58.561 46.192 1.00 75.97 C
ATOM 12 O2' U A 689 32.784 57.954 47.044 1.00 76.43 O
ATOM 13 C1' U A 689 34.925 59.086 46.996 1.00 75.93 C
ATOM 14 N1 U A 689 34.748 60.415 47.606 1.00 76.72 N
ATOM 15 C2 U A 689 34.958 60.522 48.972 1.00 77.05 C
ATOM 16 O2 U A 689 35.221 59.564 49.685 1.00 76.51 O
ATOM 17 N3 U A 689 34.851 61.796 49.476 1.00 78.06 N
ATOM 18 C4 U A 689 34.556 62.948 48.776 1.00 77.68 C
ATOM 19 O4 U A 689 34.641 64.035 49.349 1.00 77.62 O
ATOM 20 C5 U A 689 34.310 62.752 47.378 1.00 76.96 C
ATOM 21 C6 U A 689 34.411 61.525 46.853 1.00 76.96 C
ATOM 22 P G A 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 23 OP1 G A 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 24 OP2 G A 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 25 O5' G A 690 34.472 54.044 46.756 1.00 74.37 O
TER
ATOM 1 O3' U B 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 2 P G B 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 3 OP1 G B 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 4 OP2 G B 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 5 O5' G B 690 34.472 54.044 46.756 1.00 74.37 O
ATOM 6 C5' G B 690 34.918 52.692 46.653 1.00 73.17 C
ATOM 7 C4' G B 690 35.442 52.213 47.986 1.00 73.00 C
ATOM 8 O4' G B 690 36.761 52.764 48.245 1.00 72.28 O
ATOM 9 C3' G B 690 34.656 52.609 49.223 1.00 72.48 C
ATOM 10 O3' G B 690 33.461 51.863 49.404 1.00 73.50 O
ATOM 11 C2' G B 690 35.681 52.355 50.317 1.00 72.80 C
ATOM 12 O2' G B 690 35.845 50.988 50.622 1.00 71.96 O
ATOM 13 C1' G B 690 36.953 52.881 49.650 1.00 73.58 C
ATOM 14 N9 G B 690 37.151 54.288 49.994 1.00 75.40 N
ATOM 15 C8 G B 690 36.883 55.391 49.216 1.00 75.69 C
ATOM 16 N7 G B 690 37.109 56.519 49.833 1.00 75.84 N
ATOM 17 C5 G B 690 37.568 56.140 51.088 1.00 76.39 C
ATOM 18 C6 G B 690 37.964 56.928 52.203 1.00 76.77 C
ATOM 19 O6 G B 690 37.990 58.162 52.308 1.00 77.86 O
ATOM 20 N1 G B 690 38.357 56.132 53.275 1.00 75.88 N
ATOM 21 C2 G B 690 38.366 54.765 53.281 1.00 74.59 C
ATOM 22 N2 G B 690 38.771 54.186 54.411 1.00 74.89 N
ATOM 23 N3 G B 690 38.003 54.020 52.255 1.00 75.05 N
ATOM 24 C4 G B 690 37.615 54.768 51.199 1.00 75.68 C
ATOM 25 P G B 691 32.331 52.402 50.416 1.00 74.44 P
ATOM 26 OP1 G B 691 31.175 51.482 50.315 1.00 75.01 O
ATOM 27 OP2 G B 691 32.126 53.856 50.214 1.00 74.13 O
ATOM 28 O5' G B 691 32.981 52.175 51.850 1.00 74.16 O
TER
ATOM 2 P U A 689 33.596 60.247 42.721 1.00 67.87 P
ATOM 3 OP1 U A 689 33.923 59.426 41.526 1.00 67.89 O
ATOM 4 OP2 U A 689 32.322 60.017 43.443 1.00 68.47 O
ATOM 5 O5' U A 689 34.795 60.142 43.763 1.00 68.09 O
ATOM 6 C5' U A 689 35.770 59.093 43.681 1.00 70.62 C
ATOM 7 C4' U A 689 35.754 58.276 44.952 1.00 74.07 C
ATOM 8 O4' U A 689 36.013 59.148 46.090 1.00 74.80 O
ATOM 9 C3' U A 689 34.438 57.568 45.268 1.00 75.51 C
ATOM 10 O3' U A 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 11 C2' U A 689 33.738 58.561 46.192 1.00 75.97 C
ATOM 12 O2' U A 689 32.784 57.954 47.044 1.00 76.43 O
ATOM 13 C1' U A 689 34.925 59.086 46.996 1.00 75.93 C
ATOM 14 N1 U A 689 34.748 60.415 47.606 1.00 76.72 N
ATOM 15 C2 U A 689 34.958 60.522 48.972 1.00 77.05 C
ATOM 16 O2 U A 689 35.221 59.564 49.685 1.00 76.51 O
ATOM 17 N3 U A 689 34.851 61.796 49.476 1.00 78.06 N
ATOM 18 C4 U A 689 34.556 62.948 48.776 1.00 77.68 C
ATOM 19 O4 U A 689 34.641 64.035 49.349 1.00 77.62 O
ATOM 20 C5 U A 689 34.310 62.752 47.378 1.00 76.96 C
ATOM 21 C6 U A 689 34.411 61.525 46.853 1.00 76.96 C
ATOM 22 P G A 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 23 OP1 G A 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 24 OP2 G A 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 25 O5' G A 690 34.472 54.044 46.756 1.00 74.37 O
TER
ATOM 1 O3' U B 689 34.736 56.392 46.007 1.00 75.64 O
ATOM 2 P G B 690 34.269 54.957 45.467 1.00 75.35 P
ATOM 3 OP1 G B 690 35.245 54.558 44.411 1.00 73.79 O
ATOM 4 OP2 G B 690 32.816 55.003 45.153 1.00 73.24 O
ATOM 5 O5' G B 690 34.472 54.044 46.756 1.00 74.37 O
ATOM 6 C5' G B 690 34.918 52.692 46.653 1.00 73.17 C
ATOM 7 C4' G B 690 35.442 52.213 47.986 1.00 73.00 C
ATOM 8 O4' G B 690 36.761 52.764 48.245 1.00 72.28 O
ATOM 9 C3' G B 690 34.656 52.609 49.223 1.00 72.48 C
ATOM 10 O3' G B 690 33.461 51.863 49.404 1.00 73.50 O
ATOM 11 C2' G B 690 35.681 52.355 50.317 1.00 72.80 C
ATOM 12 O2' G B 690 35.845 50.988 50.622 1.00 71.96 O
ATOM 13 C1' G B 690 36.953 52.881 49.650 1.00 73.58 C
ATOM 14 N9 G B 690 37.151 54.288 49.994 1.00 75.40 N
ATOM 15 C8 G B 690 36.883 55.391 49.216 1.00 75.69 C
ATOM 16 N7 G B 690 37.109 56.519 49.833 1.00 75.84 N
ATOM 17 C5 G B 690 37.568 56.140 51.088 1.00 76.39 C
ATOM 18 C6 G B 690 37.964 56.928 52.203 1.00 76.77 C
ATOM 19 O6 G B 690 37.990 58.162 52.308 1.00 77.86 O
ATOM 20 N1 G B 690 38.357 56.132 53.275 1.00 75.88 N
ATOM 21 C2 G B 690 38.366 54.765 53.281 1.00 74.59 C
ATOM 22 N2 G B 690 38.771 54.186 54.411 1.00 74.89 N
ATOM 23 N3 G B 690 38.003 54.020 52.255 1.00 75.05 N
ATOM 24 C4 G B 690 37.615 54.768 51.199 1.00 75.68 C
ATOM 25 P G B 691 32.331 52.402 50.416 1.00 74.44 P
ATOM 26 OP1 G B 691 31.175 51.482 50.315 1.00 75.01 O
ATOM 27 OP2 G B 691 32.126 53.856 50.214 1.00 74.13 O
ATOM 28 O5' G B 691 32.981 52.175 51.850 1.00 74.16 O
TER
Atoms:
C4: (34.556,62.948,48.776)
N3: (34.851,61.796,49.476)
OP1: (33.923,59.426,41.526)
OP2: (32.322,60.017,43.443)
C2: (34.958,60.522,48.972)
C1': (34.925,59.086,46.996)
C3': (34.438,57.568,45.268)
O5': (34.795,60.142,43.763)
O4': (36.013,59.148,46.090)
C5': (35.770,59.093,43.681)
P: (33.596,60.247,42.721)
C4': (35.754,58.276,44.952)
C2': (33.738,58.561,46.192)
O2': (32.784,57.954,47.044)
N1: (34.748,60.415,47.606)
O4: (34.641,64.035,49.349)
O2: (35.221,59.564,49.685)
C6: (34.411,61.525,46.853)
C5: (34.310,62.752,47.378)
O3': (34.736,56.392,46.007)
N3: (34.851,61.796,49.476)
OP1: (33.923,59.426,41.526)
OP2: (32.322,60.017,43.443)
C2: (34.958,60.522,48.972)
C1': (34.925,59.086,46.996)
C3': (34.438,57.568,45.268)
O5': (34.795,60.142,43.763)
O4': (36.013,59.148,46.090)
C5': (35.770,59.093,43.681)
P: (33.596,60.247,42.721)
C4': (35.754,58.276,44.952)
C2': (33.738,58.561,46.192)
O2': (32.784,57.954,47.044)
N1: (34.748,60.415,47.606)
O4: (34.641,64.035,49.349)
O2: (35.221,59.564,49.685)
C6: (34.411,61.525,46.853)
C5: (34.310,62.752,47.378)
O3': (34.736,56.392,46.007)
OP1: (35.245,54.558,44.411)
OP2: (32.816,55.003,45.153)
C3': (34.656,52.609,49.223)
C1': (36.953,52.881,49.650)
C5': (34.918,52.692,46.653)
O6: (37.990,58.162,52.308)
O4': (36.761,52.764,48.245)
C8: (36.883,55.391,49.216)
C2: (38.366,54.765,53.281)
C6: (37.964,56.928,52.203)
C5: (37.568,56.140,51.088)
C4: (37.615,54.768,51.199)
P: (34.269,54.957,45.467)
C4': (35.442,52.213,47.986)
C2': (35.681,52.355,50.317)
O2': (35.845,50.988,50.622)
N1: (38.357,56.132,53.275)
N2: (38.771,54.186,54.411)
N3: (38.003,54.020,52.255)
N7: (37.109,56.519,49.833)
N9: (37.151,54.288,49.994)
O5': (34.472,54.044,46.756)
O3': (33.461,51.863,49.404)
OP2: (32.816,55.003,45.153)
C3': (34.656,52.609,49.223)
C1': (36.953,52.881,49.650)
C5': (34.918,52.692,46.653)
O6: (37.990,58.162,52.308)
O4': (36.761,52.764,48.245)
C8: (36.883,55.391,49.216)
C2: (38.366,54.765,53.281)
C6: (37.964,56.928,52.203)
C5: (37.568,56.140,51.088)
C4: (37.615,54.768,51.199)
P: (34.269,54.957,45.467)
C4': (35.442,52.213,47.986)
C2': (35.681,52.355,50.317)
O2': (35.845,50.988,50.622)
N1: (38.357,56.132,53.275)
N2: (38.771,54.186,54.411)
N3: (38.003,54.020,52.255)
N7: (37.109,56.519,49.833)
N9: (37.151,54.288,49.994)
O5': (34.472,54.044,46.756)
O3': (33.461,51.863,49.404)
Image (generated by PyMOL):