Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0129:0130
Extra
PDB:
ATOM 1 O3' G A 128 93.304 149.099 15.832 1.00 66.23 O
ATOM 2 P C A 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C A 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C A 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C A 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C A 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C A 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C A 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C A 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C A 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C A 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C A 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C A 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C A 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C A 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C A 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C A 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C A 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C A 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C A 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C A 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G A 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G A 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G A 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G A 130 86.012 149.419 13.932 1.00 54.01 O
TER
ATOM 1 O3' C B 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 2 P G B 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 3 OP1 G B 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 4 OP2 G B 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 5 O5' G B 130 86.012 149.419 13.932 1.00 54.01 O
ATOM 6 C5' G B 130 85.987 149.866 12.578 1.00 54.70 C
ATOM 7 C4' G B 130 85.872 148.685 11.647 1.00 55.32 C
ATOM 8 O4' G B 130 87.118 147.947 11.618 1.00 55.74 O
ATOM 9 C3' G B 130 84.863 147.632 12.057 1.00 55.00 C
ATOM 10 O3' G B 130 83.542 148.013 11.725 1.00 54.33 O
ATOM 11 C2' G B 130 85.326 146.418 11.268 1.00 55.46 C
ATOM 12 O2' G B 130 84.898 146.456 9.926 1.00 57.06 O
ATOM 13 C1' G B 130 86.845 146.592 11.311 1.00 55.67 C
ATOM 14 N9 G B 130 87.519 145.741 12.284 1.00 56.82 N
ATOM 15 C8 G B 130 88.277 146.139 13.362 1.00 57.30 C
ATOM 16 N7 G B 130 88.793 145.137 14.023 1.00 58.41 N
ATOM 17 C5 G B 130 88.335 144.007 13.350 1.00 57.69 C
ATOM 18 C6 G B 130 88.565 142.622 13.600 1.00 56.73 C
ATOM 19 O6 G B 130 89.248 142.099 14.493 1.00 55.90 O
ATOM 20 N1 G B 130 87.904 141.820 12.673 1.00 56.26 N
ATOM 21 C2 G B 130 87.127 142.282 11.638 1.00 56.37 C
ATOM 22 N2 G B 130 86.584 141.348 10.843 1.00 56.03 N
ATOM 23 N3 G B 130 86.903 143.563 11.396 1.00 56.89 N
ATOM 24 C4 G B 130 87.536 144.364 12.283 1.00 57.39 C
ATOM 25 P C B 131 82.325 147.453 12.601 1.00 55.56 P
ATOM 26 OP1 C B 131 81.071 148.067 12.104 1.00 54.83 O
ATOM 27 OP2 C B 131 82.693 147.589 14.042 1.00 54.42 O
ATOM 28 O5' C B 131 82.284 145.916 12.207 1.00 52.79 O
TER
ATOM 2 P C A 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C A 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C A 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C A 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C A 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C A 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C A 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C A 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C A 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C A 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C A 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C A 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C A 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C A 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C A 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C A 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C A 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C A 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C A 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C A 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G A 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G A 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G A 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G A 130 86.012 149.419 13.932 1.00 54.01 O
TER
ATOM 1 O3' C B 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 2 P G B 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 3 OP1 G B 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 4 OP2 G B 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 5 O5' G B 130 86.012 149.419 13.932 1.00 54.01 O
ATOM 6 C5' G B 130 85.987 149.866 12.578 1.00 54.70 C
ATOM 7 C4' G B 130 85.872 148.685 11.647 1.00 55.32 C
ATOM 8 O4' G B 130 87.118 147.947 11.618 1.00 55.74 O
ATOM 9 C3' G B 130 84.863 147.632 12.057 1.00 55.00 C
ATOM 10 O3' G B 130 83.542 148.013 11.725 1.00 54.33 O
ATOM 11 C2' G B 130 85.326 146.418 11.268 1.00 55.46 C
ATOM 12 O2' G B 130 84.898 146.456 9.926 1.00 57.06 O
ATOM 13 C1' G B 130 86.845 146.592 11.311 1.00 55.67 C
ATOM 14 N9 G B 130 87.519 145.741 12.284 1.00 56.82 N
ATOM 15 C8 G B 130 88.277 146.139 13.362 1.00 57.30 C
ATOM 16 N7 G B 130 88.793 145.137 14.023 1.00 58.41 N
ATOM 17 C5 G B 130 88.335 144.007 13.350 1.00 57.69 C
ATOM 18 C6 G B 130 88.565 142.622 13.600 1.00 56.73 C
ATOM 19 O6 G B 130 89.248 142.099 14.493 1.00 55.90 O
ATOM 20 N1 G B 130 87.904 141.820 12.673 1.00 56.26 N
ATOM 21 C2 G B 130 87.127 142.282 11.638 1.00 56.37 C
ATOM 22 N2 G B 130 86.584 141.348 10.843 1.00 56.03 N
ATOM 23 N3 G B 130 86.903 143.563 11.396 1.00 56.89 N
ATOM 24 C4 G B 130 87.536 144.364 12.283 1.00 57.39 C
ATOM 25 P C B 131 82.325 147.453 12.601 1.00 55.56 P
ATOM 26 OP1 C B 131 81.071 148.067 12.104 1.00 54.83 O
ATOM 27 OP2 C B 131 82.693 147.589 14.042 1.00 54.42 O
ATOM 28 O5' C B 131 82.284 145.916 12.207 1.00 52.79 O
TER
Atoms:
C2: (87.314,144.418,19.007)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
OP1: (88.384,150.100,14.150)
OP2: (86.579,151.044,15.730)
C3': (84.863,147.632,12.057)
C1': (86.845,146.592,11.311)
C5': (85.987,149.866,12.578)
O6: (89.248,142.099,14.493)
O4': (87.118,147.947,11.618)
C8: (88.277,146.139,13.362)
C2: (87.127,142.282,11.638)
C6: (88.565,142.622,13.600)
C5: (88.335,144.007,13.350)
C4: (87.536,144.364,12.283)
P: (87.135,149.915,14.937)
C4': (85.872,148.685,11.647)
C2': (85.326,146.418,11.268)
O2': (84.898,146.456,9.926)
N1: (87.904,141.820,12.673)
N2: (86.584,141.348,10.843)
N3: (86.903,143.563,11.396)
N7: (88.793,145.137,14.023)
N9: (87.519,145.741,12.284)
O5': (86.012,149.419,13.932)
O3': (83.542,148.013,11.725)
OP2: (86.579,151.044,15.730)
C3': (84.863,147.632,12.057)
C1': (86.845,146.592,11.311)
C5': (85.987,149.866,12.578)
O6: (89.248,142.099,14.493)
O4': (87.118,147.947,11.618)
C8: (88.277,146.139,13.362)
C2: (87.127,142.282,11.638)
C6: (88.565,142.622,13.600)
C5: (88.335,144.007,13.350)
C4: (87.536,144.364,12.283)
P: (87.135,149.915,14.937)
C4': (85.872,148.685,11.647)
C2': (85.326,146.418,11.268)
O2': (84.898,146.456,9.926)
N1: (87.904,141.820,12.673)
N2: (86.584,141.348,10.843)
N3: (86.903,143.563,11.396)
N7: (88.793,145.137,14.023)
N9: (87.519,145.741,12.284)
O5': (86.012,149.419,13.932)
O3': (83.542,148.013,11.725)
Image (generated by PyMOL):