Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A56:A57
Extra
PDB:
ATOM 1 O3' C A 55 18.685 -78.341 -39.987 1.00 79.15 O
ATOM 2 P U A 56 19.843 -77.245 -40.185 1.00 79.05 P
ATOM 3 OP1 U A 56 20.186 -76.765 -38.825 1.00 73.19 O
ATOM 4 OP2 U A 56 19.409 -76.267 -41.219 1.00 69.09 O
ATOM 5 O5' U A 56 21.073 -78.068 -40.757 1.00 78.62 O
ATOM 6 C5' U A 56 21.771 -78.992 -39.936 1.00 75.62 C
ATOM 7 C4' U A 56 23.259 -78.858 -40.136 1.00 65.50 C
ATOM 8 O4' U A 56 23.763 -79.818 -41.092 1.00 54.90 O
ATOM 9 C3' U A 56 23.813 -77.496 -40.510 1.00 63.53 C
ATOM 10 O3' U A 56 24.824 -77.121 -39.604 1.00 60.03 O
ATOM 11 C2' U A 56 24.363 -77.697 -41.922 1.00 62.18 C
ATOM 12 O2' U A 56 25.552 -76.985 -42.181 1.00 67.18 O
ATOM 13 C1' U A 56 24.676 -79.186 -41.953 1.00 60.04 C
ATOM 14 N1 U A 56 24.471 -79.754 -43.286 1.00 62.25 N
ATOM 15 C2 U A 56 25.545 -80.394 -43.906 1.00 69.06 C
ATOM 16 O2 U A 56 26.674 -80.446 -43.421 1.00 67.48 O
ATOM 17 N3 U A 56 25.249 -80.960 -45.125 1.00 74.37 N
ATOM 18 C4 U A 56 24.026 -80.942 -45.775 1.00 69.06 C
ATOM 19 O4 U A 56 23.911 -81.515 -46.858 1.00 63.42 O
ATOM 20 C5 U A 56 22.989 -80.230 -45.084 1.00 68.25 C
ATOM 21 C6 U A 56 23.239 -79.676 -43.899 1.00 66.72 C
ATOM 22 P A A 57 25.035 -75.575 -39.284 1.00 70.42 P
ATOM 23 OP1 A A 57 24.135 -75.271 -38.135 1.00 63.99 O
ATOM 24 OP2 A A 57 24.893 -74.820 -40.563 1.00 59.85 O
ATOM 25 O5' A A 57 26.577 -75.478 -38.879 1.00 61.26 O
TER
ATOM 1 O3' U B 56 24.824 -77.121 -39.604 1.00 60.03 O
ATOM 2 P A B 57 25.035 -75.575 -39.284 1.00 70.42 P
ATOM 3 OP1 A B 57 24.135 -75.271 -38.135 1.00 63.99 O
ATOM 4 OP2 A B 57 24.893 -74.820 -40.563 1.00 59.85 O
ATOM 5 O5' A B 57 26.577 -75.478 -38.879 1.00 61.26 O
ATOM 6 C5' A B 57 26.985 -75.202 -37.543 1.00 57.70 C
ATOM 7 C4' A B 57 28.434 -75.558 -37.390 1.00 54.00 C
ATOM 8 O4' A B 57 28.574 -76.975 -37.104 1.00 53.03 O
ATOM 9 C3' A B 57 29.242 -75.347 -38.660 1.00 55.98 C
ATOM 10 O3' A B 57 29.611 -73.983 -38.823 1.00 51.73 O
ATOM 11 C2' A B 57 30.407 -76.303 -38.443 1.00 60.45 C
ATOM 12 O2' A B 57 31.359 -75.785 -37.537 1.00 64.58 O
ATOM 13 C1' A B 57 29.719 -77.486 -37.760 1.00 48.36 C
ATOM 14 N9 A B 57 29.281 -78.481 -38.741 1.00 47.98 N
ATOM 15 C8 A B 57 28.006 -78.652 -39.239 1.00 51.47 C
ATOM 16 N7 A B 57 27.912 -79.599 -40.138 1.00 53.12 N
ATOM 17 C5 A B 57 29.202 -80.089 -40.241 1.00 51.02 C
ATOM 18 C6 A B 57 29.750 -81.084 -41.035 1.00 50.01 C
ATOM 19 N6 A B 57 29.040 -81.771 -41.928 1.00 50.00 N
ATOM 20 N1 A B 57 31.069 -81.347 -40.903 1.00 47.33 N
ATOM 21 C2 A B 57 31.778 -80.625 -40.023 1.00 51.56 C
ATOM 22 N3 A B 57 31.374 -79.640 -39.223 1.00 51.49 N
ATOM 23 C4 A B 57 30.057 -79.418 -39.381 1.00 50.10 C
ATOM 24 P C B 58 29.695 -73.347 -40.296 1.00 61.36 P
ATOM 25 OP1 C B 58 29.876 -71.882 -40.137 1.00 56.14 O
ATOM 26 OP2 C B 58 28.588 -73.875 -41.146 1.00 60.44 O
ATOM 27 O5' C B 58 31.069 -73.878 -40.868 1.00 56.89 O
TER
ATOM 2 P U A 56 19.843 -77.245 -40.185 1.00 79.05 P
ATOM 3 OP1 U A 56 20.186 -76.765 -38.825 1.00 73.19 O
ATOM 4 OP2 U A 56 19.409 -76.267 -41.219 1.00 69.09 O
ATOM 5 O5' U A 56 21.073 -78.068 -40.757 1.00 78.62 O
ATOM 6 C5' U A 56 21.771 -78.992 -39.936 1.00 75.62 C
ATOM 7 C4' U A 56 23.259 -78.858 -40.136 1.00 65.50 C
ATOM 8 O4' U A 56 23.763 -79.818 -41.092 1.00 54.90 O
ATOM 9 C3' U A 56 23.813 -77.496 -40.510 1.00 63.53 C
ATOM 10 O3' U A 56 24.824 -77.121 -39.604 1.00 60.03 O
ATOM 11 C2' U A 56 24.363 -77.697 -41.922 1.00 62.18 C
ATOM 12 O2' U A 56 25.552 -76.985 -42.181 1.00 67.18 O
ATOM 13 C1' U A 56 24.676 -79.186 -41.953 1.00 60.04 C
ATOM 14 N1 U A 56 24.471 -79.754 -43.286 1.00 62.25 N
ATOM 15 C2 U A 56 25.545 -80.394 -43.906 1.00 69.06 C
ATOM 16 O2 U A 56 26.674 -80.446 -43.421 1.00 67.48 O
ATOM 17 N3 U A 56 25.249 -80.960 -45.125 1.00 74.37 N
ATOM 18 C4 U A 56 24.026 -80.942 -45.775 1.00 69.06 C
ATOM 19 O4 U A 56 23.911 -81.515 -46.858 1.00 63.42 O
ATOM 20 C5 U A 56 22.989 -80.230 -45.084 1.00 68.25 C
ATOM 21 C6 U A 56 23.239 -79.676 -43.899 1.00 66.72 C
ATOM 22 P A A 57 25.035 -75.575 -39.284 1.00 70.42 P
ATOM 23 OP1 A A 57 24.135 -75.271 -38.135 1.00 63.99 O
ATOM 24 OP2 A A 57 24.893 -74.820 -40.563 1.00 59.85 O
ATOM 25 O5' A A 57 26.577 -75.478 -38.879 1.00 61.26 O
TER
ATOM 1 O3' U B 56 24.824 -77.121 -39.604 1.00 60.03 O
ATOM 2 P A B 57 25.035 -75.575 -39.284 1.00 70.42 P
ATOM 3 OP1 A B 57 24.135 -75.271 -38.135 1.00 63.99 O
ATOM 4 OP2 A B 57 24.893 -74.820 -40.563 1.00 59.85 O
ATOM 5 O5' A B 57 26.577 -75.478 -38.879 1.00 61.26 O
ATOM 6 C5' A B 57 26.985 -75.202 -37.543 1.00 57.70 C
ATOM 7 C4' A B 57 28.434 -75.558 -37.390 1.00 54.00 C
ATOM 8 O4' A B 57 28.574 -76.975 -37.104 1.00 53.03 O
ATOM 9 C3' A B 57 29.242 -75.347 -38.660 1.00 55.98 C
ATOM 10 O3' A B 57 29.611 -73.983 -38.823 1.00 51.73 O
ATOM 11 C2' A B 57 30.407 -76.303 -38.443 1.00 60.45 C
ATOM 12 O2' A B 57 31.359 -75.785 -37.537 1.00 64.58 O
ATOM 13 C1' A B 57 29.719 -77.486 -37.760 1.00 48.36 C
ATOM 14 N9 A B 57 29.281 -78.481 -38.741 1.00 47.98 N
ATOM 15 C8 A B 57 28.006 -78.652 -39.239 1.00 51.47 C
ATOM 16 N7 A B 57 27.912 -79.599 -40.138 1.00 53.12 N
ATOM 17 C5 A B 57 29.202 -80.089 -40.241 1.00 51.02 C
ATOM 18 C6 A B 57 29.750 -81.084 -41.035 1.00 50.01 C
ATOM 19 N6 A B 57 29.040 -81.771 -41.928 1.00 50.00 N
ATOM 20 N1 A B 57 31.069 -81.347 -40.903 1.00 47.33 N
ATOM 21 C2 A B 57 31.778 -80.625 -40.023 1.00 51.56 C
ATOM 22 N3 A B 57 31.374 -79.640 -39.223 1.00 51.49 N
ATOM 23 C4 A B 57 30.057 -79.418 -39.381 1.00 50.10 C
ATOM 24 P C B 58 29.695 -73.347 -40.296 1.00 61.36 P
ATOM 25 OP1 C B 58 29.876 -71.882 -40.137 1.00 56.14 O
ATOM 26 OP2 C B 58 28.588 -73.875 -41.146 1.00 60.44 O
ATOM 27 O5' C B 58 31.069 -73.878 -40.868 1.00 56.89 O
TER
Atoms:
C4: (24.026,-80.942,-45.775)
N3: (25.249,-80.960,-45.125)
OP1: (20.186,-76.765,-38.825)
OP2: (19.409,-76.267,-41.219)
C2: (25.545,-80.394,-43.906)
C1': (24.676,-79.186,-41.953)
C3': (23.813,-77.496,-40.510)
O5': (21.073,-78.068,-40.757)
O4': (23.763,-79.818,-41.092)
C5': (21.771,-78.992,-39.936)
P: (19.843,-77.245,-40.185)
C4': (23.259,-78.858,-40.136)
C2': (24.363,-77.697,-41.922)
O2': (25.552,-76.985,-42.181)
N1: (24.471,-79.754,-43.286)
O4: (23.911,-81.515,-46.858)
O2: (26.674,-80.446,-43.421)
C6: (23.239,-79.676,-43.899)
C5: (22.989,-80.230,-45.084)
O3': (24.824,-77.121,-39.604)
N3: (25.249,-80.960,-45.125)
OP1: (20.186,-76.765,-38.825)
OP2: (19.409,-76.267,-41.219)
C2: (25.545,-80.394,-43.906)
C1': (24.676,-79.186,-41.953)
C3': (23.813,-77.496,-40.510)
O5': (21.073,-78.068,-40.757)
O4': (23.763,-79.818,-41.092)
C5': (21.771,-78.992,-39.936)
P: (19.843,-77.245,-40.185)
C4': (23.259,-78.858,-40.136)
C2': (24.363,-77.697,-41.922)
O2': (25.552,-76.985,-42.181)
N1: (24.471,-79.754,-43.286)
O4: (23.911,-81.515,-46.858)
O2: (26.674,-80.446,-43.421)
C6: (23.239,-79.676,-43.899)
C5: (22.989,-80.230,-45.084)
O3': (24.824,-77.121,-39.604)
OP1: (24.135,-75.271,-38.135)
OP2: (24.893,-74.820,-40.563)
C3': (29.242,-75.347,-38.660)
C1': (29.719,-77.486,-37.760)
C5': (26.985,-75.202,-37.543)
O4': (28.574,-76.975,-37.104)
C8: (28.006,-78.652,-39.239)
O2': (31.359,-75.785,-37.537)
C6: (29.750,-81.084,-41.035)
C5: (29.202,-80.089,-40.241)
C4: (30.057,-79.418,-39.381)
P: (25.035,-75.575,-39.284)
C4': (28.434,-75.558,-37.390)
C2': (30.407,-76.303,-38.443)
C2: (31.778,-80.625,-40.023)
N1: (31.069,-81.347,-40.903)
N3: (31.374,-79.640,-39.223)
N6: (29.040,-81.771,-41.928)
N7: (27.912,-79.599,-40.138)
N9: (29.281,-78.481,-38.741)
O5': (26.577,-75.478,-38.879)
O3': (29.611,-73.983,-38.823)
OP2: (24.893,-74.820,-40.563)
C3': (29.242,-75.347,-38.660)
C1': (29.719,-77.486,-37.760)
C5': (26.985,-75.202,-37.543)
O4': (28.574,-76.975,-37.104)
C8: (28.006,-78.652,-39.239)
O2': (31.359,-75.785,-37.537)
C6: (29.750,-81.084,-41.035)
C5: (29.202,-80.089,-40.241)
C4: (30.057,-79.418,-39.381)
P: (25.035,-75.575,-39.284)
C4': (28.434,-75.558,-37.390)
C2': (30.407,-76.303,-38.443)
C2: (31.778,-80.625,-40.023)
N1: (31.069,-81.347,-40.903)
N3: (31.374,-79.640,-39.223)
N6: (29.040,-81.771,-41.928)
N7: (27.912,-79.599,-40.138)
N9: (29.281,-78.481,-38.741)
O5': (26.577,-75.478,-38.879)
O3': (29.611,-73.983,-38.823)
Image (generated by PyMOL):