ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OI1:A56:A57

Extra

PDB:
ATOM 1 O3' C A 55 244.929 -72.095-123.337 1.00 82.40 O
ATOM 2 P U A 56 243.839 -71.878-124.496 1.00105.70 P
ATOM 3 OP1 U A 56 243.498 -73.236-125.026 1.00 89.78 O
ATOM 4 OP2 U A 56 244.395 -70.848-125.438 1.00 74.85 O
ATOM 5 O5' U A 56 242.586 -71.274-123.704 1.00 82.50 O
ATOM 6 C5' U A 56 241.595 -72.126-123.132 1.00 76.24 C
ATOM 7 C4' U A 56 240.206 -71.741-123.579 1.00 75.09 C
ATOM 8 O4' U A 56 239.675 -70.723-122.686 1.00 69.89 O
ATOM 9 C3' U A 56 240.116 -71.151-124.991 1.00 82.78 C
ATOM 10 O3' U A 56 238.865 -71.509-125.569 1.00 84.62 O
ATOM 11 C2' U A 56 240.113 -69.655-124.718 1.00 77.40 C
ATOM 12 O2' U A 56 239.550 -68.869-125.747 1.00 77.16 O
ATOM 13 C1' U A 56 239.276 -69.602-123.451 1.00 76.82 C
ATOM 14 N1 U A 56 239.479 -68.387-122.661 1.00 79.56 N
ATOM 15 C2 U A 56 238.391 -67.917-121.951 1.00 88.64 C
ATOM 16 O2 U A 56 237.300 -68.489-121.927 1.00 84.58 O
ATOM 17 N3 U A 56 238.651 -66.756-121.264 1.00 84.53 N
ATOM 18 C4 U A 56 239.838 -66.057-121.239 1.00 71.29 C
ATOM 19 O4 U A 56 239.907 -65.034-120.570 1.00 85.72 O
ATOM 20 C5 U A 56 240.894 -66.608-122.012 1.00 57.28 C
ATOM 21 C6 U A 56 240.678 -67.727-122.691 1.00 68.85 C
ATOM 22 P A A 57 238.761 -72.709-126.628 1.00 85.39 P
ATOM 23 OP1 A A 57 239.707 -73.777-126.195 1.00 82.50 O
ATOM 24 OP2 A A 57 238.923 -72.105-127.971 1.00 83.23 O
ATOM 25 O5' A A 57 237.258 -73.200-126.419 1.00 76.97 O
TER

ATOM 1 O3' U B 56 238.865 -71.509-125.569 1.00 84.62 O
ATOM 2 P A B 57 238.761 -72.709-126.628 1.00 85.39 P
ATOM 3 OP1 A B 57 239.707 -73.777-126.195 1.00 82.50 O
ATOM 4 OP2 A B 57 238.923 -72.105-127.971 1.00 83.23 O
ATOM 5 O5' A B 57 237.258 -73.200-126.419 1.00 76.97 O
ATOM 6 C5' A B 57 236.709 -74.256-127.192 1.00 70.07 C
ATOM 7 C4' A B 57 235.224 -74.421-126.932 1.00 73.93 C
ATOM 8 O4' A B 57 234.989 -74.797-125.543 1.00 75.36 O
ATOM 9 C3' A B 57 234.364 -73.180-127.111 1.00 62.40 C
ATOM 10 O3' A B 57 234.080 -72.896-128.467 1.00 67.27 O
ATOM 11 C2' A B 57 233.137 -73.530-126.288 1.00 60.60 C
ATOM 12 O2' A B 57 232.355 -74.513-126.958 1.00 70.30 O
ATOM 13 C1' A B 57 233.794 -74.195-125.083 1.00 65.70 C
ATOM 14 N9 A B 57 234.143 -73.214-124.038 1.00 68.74 N
ATOM 15 C8 A B 57 235.406 -72.806-123.674 1.00 65.32 C
ATOM 16 N7 A B 57 235.416 -71.923-122.700 1.00 67.90 N
ATOM 17 C5 A B 57 234.069 -71.746-122.403 1.00 57.11 C
ATOM 18 C6 A B 57 233.412 -70.940-121.472 1.00 52.86 C
ATOM 19 N6 A B 57 234.058 -70.135-120.635 1.00 66.96 N
ATOM 20 N1 A B 57 232.068 -70.967-121.424 1.00 59.83 N
ATOM 21 C2 A B 57 231.431 -71.773-122.271 1.00 66.49 C
ATOM 22 N3 A B 57 231.939 -72.582-123.200 1.00 67.35 N
ATOM 23 C4 A B 57 233.276 -72.530-123.213 1.00 63.78 C
ATOM 24 P C B 58 233.781 -71.389-128.920 1.00 83.13 P
ATOM 25 OP1 C B 58 233.466 -71.419-130.389 1.00 61.15 O
ATOM 26 OP2 C B 58 234.933 -70.561-128.452 1.00 71.33 O
ATOM 27 O5' C B 58 232.465 -71.043-128.079 1.00 52.88 O
TER

Atoms:
C4: (239.838,-66.057,-121.239)
N3: (238.651,-66.756,-121.264)
OP1: (243.498,-73.236,-125.026)
OP2: (244.395,-70.848,-125.438)
C2: (238.391,-67.917,-121.951)
C1': (239.276,-69.602,-123.451)
C3': (240.116,-71.151,-124.991)
O5': (242.586,-71.274,-123.704)
O4': (239.675,-70.723,-122.686)
C5': (241.595,-72.126,-123.132)
P: (243.839,-71.878,-124.496)
C4': (240.206,-71.741,-123.579)
C2': (240.113,-69.655,-124.718)
O2': (239.550,-68.869,-125.747)
N1: (239.479,-68.387,-122.661)
O4: (239.907,-65.034,-120.570)
O2: (237.300,-68.489,-121.927)
C6: (240.678,-67.727,-122.691)
C5: (240.894,-66.608,-122.012)
O3': (238.865,-71.509,-125.569)
OP1: (239.707,-73.777,-126.195)
OP2: (238.923,-72.105,-127.971)
C3': (234.364,-73.180,-127.111)
C1': (233.794,-74.195,-125.083)
C5': (236.709,-74.256,-127.192)
O4': (234.989,-74.797,-125.543)
C8: (235.406,-72.806,-123.674)
O2': (232.355,-74.513,-126.958)
C6: (233.412,-70.940,-121.472)
C5: (234.069,-71.746,-122.403)
C4: (233.276,-72.530,-123.213)
P: (238.761,-72.709,-126.628)
C4': (235.224,-74.421,-126.932)
C2': (233.137,-73.530,-126.288)
C2: (231.431,-71.773,-122.271)
N1: (232.068,-70.967,-121.424)
N3: (231.939,-72.582,-123.200)
N6: (234.058,-70.135,-120.635)
N7: (235.416,-71.923,-122.700)
N9: (234.143,-73.214,-124.038)
O5': (237.258,-73.200,-126.419)
O3': (234.080,-72.896,-128.467)
Image (generated by PyMOL):
PyMOL image
show in jmol