Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1898:A1900
Extra
PDB:
ATOM 1 O3' U A1897 120.532 112.342 81.302 1.00 50.70 O
ATOM 2 P C A1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 3 OP1 C A1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 4 OP2 C A1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 5 O5' C A1898 118.683 112.359 82.987 1.00 50.21 O
ATOM 6 C5' C A1898 117.917 113.477 82.514 1.00 50.00 C
ATOM 7 C4' C A1898 116.763 113.732 83.442 1.00 51.30 C
ATOM 8 O4' C A1898 115.949 112.536 83.506 1.00 52.56 O
ATOM 9 C3' C A1898 117.124 114.063 84.880 1.00 51.75 C
ATOM 10 O3' C A1898 117.269 115.489 84.960 1.00 52.60 O
ATOM 11 C2' C A1898 115.885 113.589 85.641 1.00 51.98 C
ATOM 12 O2' C A1898 114.871 114.562 85.591 1.00 50.81 O
ATOM 13 C1' C A1898 115.427 112.378 84.811 1.00 53.23 C
ATOM 14 N1 C A1898 115.846 111.054 85.312 1.00 55.82 N
ATOM 15 C2 C A1898 114.881 110.035 85.489 1.00 57.27 C
ATOM 16 O2 C A1898 113.697 110.244 85.188 1.00 57.30 O
ATOM 17 N3 C A1898 115.278 108.839 85.978 1.00 59.23 N
ATOM 18 C4 C A1898 116.564 108.622 86.260 1.00 59.82 C
ATOM 19 N4 C A1898 116.912 107.424 86.734 1.00 61.85 N
ATOM 20 C5 C A1898 117.555 109.619 86.071 1.00 58.51 C
ATOM 21 C6 C A1898 117.159 110.809 85.605 1.00 57.47 C
ATOM 22 P A A1899 118.076 116.182 86.177 1.00 52.01 P
ATOM 23 OP1 A A1899 119.445 116.409 85.672 1.00 52.88 O
ATOM 24 OP2 A A1899 117.867 115.429 87.451 1.00 51.58 O
ATOM 25 O5' A A1899 117.416 117.629 86.311 1.00 51.16 O
TER
ATOM 1 O3' A B1899 114.560 119.017 83.407 1.00 51.59 O
ATOM 2 P A B1900 114.549 118.679 81.840 1.00 50.31 P
ATOM 3 OP1 A B1900 115.941 118.493 81.368 1.00 50.30 O
ATOM 4 OP2 A B1900 113.700 119.709 81.183 1.00 50.11 O
ATOM 5 O5' A B1900 113.842 117.250 81.825 1.00 51.90 O
ATOM 6 C5' A B1900 113.107 116.804 80.674 1.00 55.05 C
ATOM 7 C4' A B1900 112.406 115.465 80.921 1.00 54.68 C
ATOM 8 O4' A B1900 113.027 114.239 80.490 1.00 55.99 O
ATOM 9 C3' A B1900 111.496 115.026 82.051 1.00 53.67 C
ATOM 10 O3' A B1900 110.471 115.973 82.368 1.00 51.43 O
ATOM 11 C2' A B1900 110.849 113.815 81.367 1.00 55.12 C
ATOM 12 O2' A B1900 109.850 114.222 80.445 1.00 54.43 O
ATOM 13 C1' A B1900 112.010 113.254 80.522 1.00 56.36 C
ATOM 14 N9 A B1900 112.569 111.964 80.928 1.00 57.60 N
ATOM 15 C8 A B1900 113.826 111.686 81.391 1.00 58.81 C
ATOM 16 N7 A B1900 114.032 110.414 81.634 1.00 60.15 N
ATOM 17 C5 A B1900 112.826 109.812 81.314 1.00 60.73 C
ATOM 18 C6 A B1900 112.396 108.468 81.356 1.00 61.66 C
ATOM 19 N6 A B1900 113.158 107.463 81.782 1.00 63.35 N
ATOM 20 N1 A B1900 111.139 108.197 80.956 1.00 61.94 N
ATOM 21 C2 A B1900 110.365 109.217 80.569 1.00 61.45 C
ATOM 22 N3 A B1900 110.648 110.521 80.504 1.00 60.12 N
ATOM 23 C4 A B1900 111.912 110.755 80.886 1.00 59.46 C
ATOM 24 P C B1901 109.557 115.759 83.680 1.00 51.12 P
ATOM 25 OP1 C B1901 108.553 116.862 83.750 1.00 49.86 O
ATOM 26 OP2 C B1901 110.440 115.512 84.836 1.00 51.14 O
ATOM 27 O5' C B1901 108.713 114.442 83.363 1.00 51.27 O
TER
ATOM 2 P C A1898 120.264 112.353 82.885 1.00 48.92 P
ATOM 3 OP1 C A1898 120.719 113.622 83.529 1.00 50.57 O
ATOM 4 OP2 C A1898 120.750 111.064 83.403 1.00 47.59 O
ATOM 5 O5' C A1898 118.683 112.359 82.987 1.00 50.21 O
ATOM 6 C5' C A1898 117.917 113.477 82.514 1.00 50.00 C
ATOM 7 C4' C A1898 116.763 113.732 83.442 1.00 51.30 C
ATOM 8 O4' C A1898 115.949 112.536 83.506 1.00 52.56 O
ATOM 9 C3' C A1898 117.124 114.063 84.880 1.00 51.75 C
ATOM 10 O3' C A1898 117.269 115.489 84.960 1.00 52.60 O
ATOM 11 C2' C A1898 115.885 113.589 85.641 1.00 51.98 C
ATOM 12 O2' C A1898 114.871 114.562 85.591 1.00 50.81 O
ATOM 13 C1' C A1898 115.427 112.378 84.811 1.00 53.23 C
ATOM 14 N1 C A1898 115.846 111.054 85.312 1.00 55.82 N
ATOM 15 C2 C A1898 114.881 110.035 85.489 1.00 57.27 C
ATOM 16 O2 C A1898 113.697 110.244 85.188 1.00 57.30 O
ATOM 17 N3 C A1898 115.278 108.839 85.978 1.00 59.23 N
ATOM 18 C4 C A1898 116.564 108.622 86.260 1.00 59.82 C
ATOM 19 N4 C A1898 116.912 107.424 86.734 1.00 61.85 N
ATOM 20 C5 C A1898 117.555 109.619 86.071 1.00 58.51 C
ATOM 21 C6 C A1898 117.159 110.809 85.605 1.00 57.47 C
ATOM 22 P A A1899 118.076 116.182 86.177 1.00 52.01 P
ATOM 23 OP1 A A1899 119.445 116.409 85.672 1.00 52.88 O
ATOM 24 OP2 A A1899 117.867 115.429 87.451 1.00 51.58 O
ATOM 25 O5' A A1899 117.416 117.629 86.311 1.00 51.16 O
TER
ATOM 1 O3' A B1899 114.560 119.017 83.407 1.00 51.59 O
ATOM 2 P A B1900 114.549 118.679 81.840 1.00 50.31 P
ATOM 3 OP1 A B1900 115.941 118.493 81.368 1.00 50.30 O
ATOM 4 OP2 A B1900 113.700 119.709 81.183 1.00 50.11 O
ATOM 5 O5' A B1900 113.842 117.250 81.825 1.00 51.90 O
ATOM 6 C5' A B1900 113.107 116.804 80.674 1.00 55.05 C
ATOM 7 C4' A B1900 112.406 115.465 80.921 1.00 54.68 C
ATOM 8 O4' A B1900 113.027 114.239 80.490 1.00 55.99 O
ATOM 9 C3' A B1900 111.496 115.026 82.051 1.00 53.67 C
ATOM 10 O3' A B1900 110.471 115.973 82.368 1.00 51.43 O
ATOM 11 C2' A B1900 110.849 113.815 81.367 1.00 55.12 C
ATOM 12 O2' A B1900 109.850 114.222 80.445 1.00 54.43 O
ATOM 13 C1' A B1900 112.010 113.254 80.522 1.00 56.36 C
ATOM 14 N9 A B1900 112.569 111.964 80.928 1.00 57.60 N
ATOM 15 C8 A B1900 113.826 111.686 81.391 1.00 58.81 C
ATOM 16 N7 A B1900 114.032 110.414 81.634 1.00 60.15 N
ATOM 17 C5 A B1900 112.826 109.812 81.314 1.00 60.73 C
ATOM 18 C6 A B1900 112.396 108.468 81.356 1.00 61.66 C
ATOM 19 N6 A B1900 113.158 107.463 81.782 1.00 63.35 N
ATOM 20 N1 A B1900 111.139 108.197 80.956 1.00 61.94 N
ATOM 21 C2 A B1900 110.365 109.217 80.569 1.00 61.45 C
ATOM 22 N3 A B1900 110.648 110.521 80.504 1.00 60.12 N
ATOM 23 C4 A B1900 111.912 110.755 80.886 1.00 59.46 C
ATOM 24 P C B1901 109.557 115.759 83.680 1.00 51.12 P
ATOM 25 OP1 C B1901 108.553 116.862 83.750 1.00 49.86 O
ATOM 26 OP2 C B1901 110.440 115.512 84.836 1.00 51.14 O
ATOM 27 O5' C B1901 108.713 114.442 83.363 1.00 51.27 O
TER
Atoms:
C2: (114.881,110.035,85.489)
OP1: (120.719,113.622,83.529)
OP2: (120.750,111.064,83.403)
C4: (116.564,108.622,86.260)
O5': (118.683,112.359,82.987)
C3': (117.124,114.063,84.880)
C1': (115.427,112.378,84.811)
O4': (115.949,112.536,83.506)
C5': (117.917,113.477,82.514)
P: (120.264,112.353,82.885)
O2: (113.697,110.244,85.188)
C4': (116.763,113.732,83.442)
C2': (115.885,113.589,85.641)
O2': (114.871,114.562,85.591)
N1: (115.846,111.054,85.312)
N3: (115.278,108.839,85.978)
N4: (116.912,107.424,86.734)
C6: (117.159,110.809,85.605)
C5: (117.555,109.619,86.071)
O3': (117.269,115.489,84.960)
OP1: (120.719,113.622,83.529)
OP2: (120.750,111.064,83.403)
C4: (116.564,108.622,86.260)
O5': (118.683,112.359,82.987)
C3': (117.124,114.063,84.880)
C1': (115.427,112.378,84.811)
O4': (115.949,112.536,83.506)
C5': (117.917,113.477,82.514)
P: (120.264,112.353,82.885)
O2: (113.697,110.244,85.188)
C4': (116.763,113.732,83.442)
C2': (115.885,113.589,85.641)
O2': (114.871,114.562,85.591)
N1: (115.846,111.054,85.312)
N3: (115.278,108.839,85.978)
N4: (116.912,107.424,86.734)
C6: (117.159,110.809,85.605)
C5: (117.555,109.619,86.071)
O3': (117.269,115.489,84.960)
OP1: (115.941,118.493,81.368)
OP2: (113.700,119.709,81.183)
C3': (111.496,115.026,82.051)
C1': (112.010,113.254,80.522)
C5': (113.107,116.804,80.674)
O4': (113.027,114.239,80.490)
C8: (113.826,111.686,81.391)
O2': (109.850,114.222,80.445)
C6: (112.396,108.468,81.356)
C5: (112.826,109.812,81.314)
C4: (111.912,110.755,80.886)
P: (114.549,118.679,81.840)
C4': (112.406,115.465,80.921)
C2': (110.849,113.815,81.367)
C2: (110.365,109.217,80.569)
N1: (111.139,108.197,80.956)
N3: (110.648,110.521,80.504)
N6: (113.158,107.463,81.782)
N7: (114.032,110.414,81.634)
N9: (112.569,111.964,80.928)
O5': (113.842,117.250,81.825)
O3': (110.471,115.973,82.368)
OP2: (113.700,119.709,81.183)
C3': (111.496,115.026,82.051)
C1': (112.010,113.254,80.522)
C5': (113.107,116.804,80.674)
O4': (113.027,114.239,80.490)
C8: (113.826,111.686,81.391)
O2': (109.850,114.222,80.445)
C6: (112.396,108.468,81.356)
C5: (112.826,109.812,81.314)
C4: (111.912,110.755,80.886)
P: (114.549,118.679,81.840)
C4': (112.406,115.465,80.921)
C2': (110.849,113.815,81.367)
C2: (110.365,109.217,80.569)
N1: (111.139,108.197,80.956)
N3: (110.648,110.521,80.504)
N6: (113.158,107.463,81.782)
N7: (114.032,110.414,81.634)
N9: (112.569,111.964,80.928)
O5': (113.842,117.250,81.825)
O3': (110.471,115.973,82.368)
Image (generated by PyMOL):