Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:01898:01900
Extra
PDB:
ATOM 1 O3' U A1897 120.459 111.902 81.022 1.00 46.46 O
ATOM 2 P C A1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C A1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C A1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C A1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C A1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C A1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C A1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C A1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C A1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C A1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C A1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C A1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C A1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C A1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C A1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C A1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C A1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C A1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C A1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C A1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A A1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A A1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A A1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A A1899 117.389 117.231 85.937 1.00 48.35 O
TER
ATOM 1 O3' A B1899 114.559 118.585 83.063 1.00 51.11 O
ATOM 2 P A B1900 114.493 118.166 81.517 1.00 50.93 P
ATOM 3 OP1 A B1900 115.836 117.979 80.927 1.00 50.75 O
ATOM 4 OP2 A B1900 113.561 119.145 80.911 1.00 52.13 O
ATOM 5 O5' A B1900 113.756 116.757 81.489 1.00 52.81 O
ATOM 6 C5' A B1900 113.000 116.446 80.321 1.00 54.71 C
ATOM 7 C4' A B1900 112.189 115.183 80.457 1.00 51.62 C
ATOM 8 O4' A B1900 112.848 113.988 80.022 1.00 51.41 O
ATOM 9 C3' A B1900 111.404 114.703 81.658 1.00 48.47 C
ATOM 10 O3' A B1900 110.387 115.627 82.046 1.00 47.75 O
ATOM 11 C2' A B1900 110.745 113.489 80.996 1.00 49.83 C
ATOM 12 O2' A B1900 109.737 113.917 80.095 1.00 46.53 O
ATOM 13 C1' A B1900 111.884 112.959 80.104 1.00 51.08 C
ATOM 14 N9 A B1900 112.521 111.708 80.514 1.00 50.73 N
ATOM 15 C8 A B1900 113.772 111.487 81.031 1.00 50.37 C
ATOM 16 N7 A B1900 114.037 110.223 81.246 1.00 50.63 N
ATOM 17 C5 A B1900 112.879 109.569 80.853 1.00 50.94 C
ATOM 18 C6 A B1900 112.519 108.212 80.826 1.00 50.82 C
ATOM 19 N6 A B1900 113.316 107.220 81.223 1.00 50.08 N
ATOM 20 N1 A B1900 111.288 107.902 80.370 1.00 50.94 N
ATOM 21 C2 A B1900 110.480 108.891 79.978 1.00 50.87 C
ATOM 22 N3 A B1900 110.700 110.197 79.960 1.00 50.21 N
ATOM 23 C4 A B1900 111.934 110.473 80.412 1.00 50.93 C
ATOM 24 P C B1901 109.512 115.366 83.381 1.00 45.33 P
ATOM 25 OP1 C B1901 108.631 116.549 83.544 1.00 44.49 O
ATOM 26 OP2 C B1901 110.387 114.952 84.496 1.00 44.80 O
ATOM 27 O5' C B1901 108.596 114.121 83.007 1.00 46.74 O
TER
ATOM 2 P C A1898 120.117 111.907 82.585 1.00 48.48 P
ATOM 3 OP1 C A1898 120.631 113.180 83.157 1.00 50.03 O
ATOM 4 OP2 C A1898 120.533 110.611 83.179 1.00 47.70 O
ATOM 5 O5' C A1898 118.530 111.961 82.615 1.00 50.01 O
ATOM 6 C5' C A1898 117.815 113.106 82.120 1.00 49.59 C
ATOM 7 C4' C A1898 116.654 113.400 83.031 1.00 49.75 C
ATOM 8 O4' C A1898 115.854 112.199 83.145 1.00 50.63 O
ATOM 9 C3' C A1898 117.044 113.750 84.458 1.00 49.70 C
ATOM 10 O3' C A1898 117.242 115.159 84.547 1.00 50.13 O
ATOM 11 C2' C A1898 115.829 113.299 85.258 1.00 49.50 C
ATOM 12 O2' C A1898 114.794 114.255 85.223 1.00 48.49 O
ATOM 13 C1' C A1898 115.381 112.066 84.469 1.00 50.38 C
ATOM 14 N1 C A1898 115.810 110.749 84.964 1.00 51.37 N
ATOM 15 C2 C A1898 114.897 109.698 84.922 1.00 53.13 C
ATOM 16 O2 C A1898 113.746 109.920 84.517 1.00 53.96 O
ATOM 17 N3 C A1898 115.285 108.466 85.326 1.00 53.66 N
ATOM 18 C4 C A1898 116.525 108.271 85.770 1.00 52.25 C
ATOM 19 N4 C A1898 116.865 107.041 86.145 1.00 53.72 N
ATOM 20 C5 C A1898 117.471 109.329 85.845 1.00 52.13 C
ATOM 21 C6 C A1898 117.076 110.541 85.437 1.00 52.66 C
ATOM 22 P A A1899 118.046 115.792 85.785 1.00 49.11 P
ATOM 23 OP1 A A1899 119.446 115.973 85.324 1.00 52.39 O
ATOM 24 OP2 A A1899 117.773 115.028 87.029 1.00 47.38 O
ATOM 25 O5' A A1899 117.389 117.231 85.937 1.00 48.35 O
TER
ATOM 1 O3' A B1899 114.559 118.585 83.063 1.00 51.11 O
ATOM 2 P A B1900 114.493 118.166 81.517 1.00 50.93 P
ATOM 3 OP1 A B1900 115.836 117.979 80.927 1.00 50.75 O
ATOM 4 OP2 A B1900 113.561 119.145 80.911 1.00 52.13 O
ATOM 5 O5' A B1900 113.756 116.757 81.489 1.00 52.81 O
ATOM 6 C5' A B1900 113.000 116.446 80.321 1.00 54.71 C
ATOM 7 C4' A B1900 112.189 115.183 80.457 1.00 51.62 C
ATOM 8 O4' A B1900 112.848 113.988 80.022 1.00 51.41 O
ATOM 9 C3' A B1900 111.404 114.703 81.658 1.00 48.47 C
ATOM 10 O3' A B1900 110.387 115.627 82.046 1.00 47.75 O
ATOM 11 C2' A B1900 110.745 113.489 80.996 1.00 49.83 C
ATOM 12 O2' A B1900 109.737 113.917 80.095 1.00 46.53 O
ATOM 13 C1' A B1900 111.884 112.959 80.104 1.00 51.08 C
ATOM 14 N9 A B1900 112.521 111.708 80.514 1.00 50.73 N
ATOM 15 C8 A B1900 113.772 111.487 81.031 1.00 50.37 C
ATOM 16 N7 A B1900 114.037 110.223 81.246 1.00 50.63 N
ATOM 17 C5 A B1900 112.879 109.569 80.853 1.00 50.94 C
ATOM 18 C6 A B1900 112.519 108.212 80.826 1.00 50.82 C
ATOM 19 N6 A B1900 113.316 107.220 81.223 1.00 50.08 N
ATOM 20 N1 A B1900 111.288 107.902 80.370 1.00 50.94 N
ATOM 21 C2 A B1900 110.480 108.891 79.978 1.00 50.87 C
ATOM 22 N3 A B1900 110.700 110.197 79.960 1.00 50.21 N
ATOM 23 C4 A B1900 111.934 110.473 80.412 1.00 50.93 C
ATOM 24 P C B1901 109.512 115.366 83.381 1.00 45.33 P
ATOM 25 OP1 C B1901 108.631 116.549 83.544 1.00 44.49 O
ATOM 26 OP2 C B1901 110.387 114.952 84.496 1.00 44.80 O
ATOM 27 O5' C B1901 108.596 114.121 83.007 1.00 46.74 O
TER
Atoms:
C2: (114.897,109.698,84.922)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
OP1: (120.631,113.180,83.157)
OP2: (120.533,110.611,83.179)
C4: (116.525,108.271,85.770)
O5': (118.530,111.961,82.615)
C3': (117.044,113.750,84.458)
C1': (115.381,112.066,84.469)
O4': (115.854,112.199,83.145)
C5': (117.815,113.106,82.120)
P: (120.117,111.907,82.585)
O2: (113.746,109.920,84.517)
C4': (116.654,113.400,83.031)
C2': (115.829,113.299,85.258)
O2': (114.794,114.255,85.223)
N1: (115.810,110.749,84.964)
N3: (115.285,108.466,85.326)
N4: (116.865,107.041,86.145)
C6: (117.076,110.541,85.437)
C5: (117.471,109.329,85.845)
O3': (117.242,115.159,84.547)
OP1: (115.836,117.979,80.927)
OP2: (113.561,119.145,80.911)
C3': (111.404,114.703,81.658)
C1': (111.884,112.959,80.104)
C5': (113.000,116.446,80.321)
O4': (112.848,113.988,80.022)
C8: (113.772,111.487,81.031)
O2': (109.737,113.917,80.095)
C6: (112.519,108.212,80.826)
C5: (112.879,109.569,80.853)
C4: (111.934,110.473,80.412)
P: (114.493,118.166,81.517)
C4': (112.189,115.183,80.457)
C2': (110.745,113.489,80.996)
C2: (110.480,108.891,79.978)
N1: (111.288,107.902,80.370)
N3: (110.700,110.197,79.960)
N6: (113.316,107.220,81.223)
N7: (114.037,110.223,81.246)
N9: (112.521,111.708,80.514)
O5': (113.756,116.757,81.489)
O3': (110.387,115.627,82.046)
OP2: (113.561,119.145,80.911)
C3': (111.404,114.703,81.658)
C1': (111.884,112.959,80.104)
C5': (113.000,116.446,80.321)
O4': (112.848,113.988,80.022)
C8: (113.772,111.487,81.031)
O2': (109.737,113.917,80.095)
C6: (112.519,108.212,80.826)
C5: (112.879,109.569,80.853)
C4: (111.934,110.473,80.412)
P: (114.493,118.166,81.517)
C4': (112.189,115.183,80.457)
C2': (110.745,113.489,80.996)
C2: (110.480,108.891,79.978)
N1: (111.288,107.902,80.370)
N3: (110.700,110.197,79.960)
N6: (113.316,107.220,81.223)
N7: (114.037,110.223,81.246)
N9: (112.521,111.708,80.514)
O5': (113.756,116.757,81.489)
O3': (110.387,115.627,82.046)
Image (generated by PyMOL):