Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01898:01900
Extra
PDB:
ATOM 1 O3' U A1897 120.552 111.934 80.979 1.00 45.71 O
ATOM 2 P C A1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 3 OP1 C A1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 4 OP2 C A1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 5 O5' C A1898 118.524 111.969 82.458 1.00 48.85 O
ATOM 6 C5' C A1898 117.812 113.135 82.003 1.00 48.10 C
ATOM 7 C4' C A1898 116.654 113.410 82.927 1.00 47.89 C
ATOM 8 O4' C A1898 115.864 112.202 83.045 1.00 48.46 O
ATOM 9 C3' C A1898 117.063 113.759 84.346 1.00 47.33 C
ATOM 10 O3' C A1898 117.221 115.171 84.429 1.00 47.86 O
ATOM 11 C2' C A1898 115.886 113.265 85.176 1.00 47.88 C
ATOM 12 O2' C A1898 114.823 114.189 85.212 1.00 49.42 O
ATOM 13 C1' C A1898 115.436 112.039 84.377 1.00 48.48 C
ATOM 14 N1 C A1898 115.900 110.721 84.839 1.00 49.89 N
ATOM 15 C2 C A1898 114.988 109.667 84.851 1.00 51.62 C
ATOM 16 O2 C A1898 113.821 109.879 84.490 1.00 52.34 O
ATOM 17 N3 C A1898 115.397 108.441 85.253 1.00 52.27 N
ATOM 18 C4 C A1898 116.657 108.254 85.639 1.00 50.74 C
ATOM 19 N4 C A1898 117.011 107.032 86.031 1.00 51.03 N
ATOM 20 C5 C A1898 117.609 109.311 85.639 1.00 51.00 C
ATOM 21 C6 C A1898 117.192 110.518 85.238 1.00 50.83 C
ATOM 22 P A A1899 118.091 115.820 85.606 1.00 48.50 P
ATOM 23 OP1 A A1899 119.479 115.963 85.096 1.00 51.47 O
ATOM 24 OP2 A A1899 117.840 115.069 86.867 1.00 47.85 O
ATOM 25 O5' A A1899 117.478 117.278 85.755 1.00 47.19 O
TER
ATOM 1 O3' A B1899 114.607 118.592 82.987 1.00 46.50 O
ATOM 2 P A B1900 114.555 118.177 81.441 1.00 44.48 P
ATOM 3 OP1 A B1900 115.913 118.015 80.886 1.00 43.83 O
ATOM 4 OP2 A B1900 113.627 119.145 80.811 1.00 43.20 O
ATOM 5 O5' A B1900 113.839 116.757 81.405 1.00 45.15 O
ATOM 6 C5' A B1900 113.110 116.431 80.225 1.00 48.96 C
ATOM 7 C4' A B1900 112.239 115.212 80.378 1.00 46.88 C
ATOM 8 O4' A B1900 112.870 114.002 79.950 1.00 47.79 O
ATOM 9 C3' A B1900 111.475 114.757 81.605 1.00 44.70 C
ATOM 10 O3' A B1900 110.461 115.688 81.984 1.00 43.53 O
ATOM 11 C2' A B1900 110.801 113.527 80.993 1.00 46.23 C
ATOM 12 O2' A B1900 109.762 113.927 80.119 1.00 43.95 O
ATOM 13 C1' A B1900 111.902 112.987 80.068 1.00 48.09 C
ATOM 14 N9 A B1900 112.542 111.731 80.453 1.00 50.01 N
ATOM 15 C8 A B1900 113.788 111.509 80.979 1.00 49.93 C
ATOM 16 N7 A B1900 114.065 110.242 81.157 1.00 51.61 N
ATOM 17 C5 A B1900 112.918 109.588 80.730 1.00 51.14 C
ATOM 18 C6 A B1900 112.574 108.230 80.655 1.00 51.51 C
ATOM 19 N6 A B1900 113.380 107.238 81.037 1.00 52.03 N
ATOM 20 N1 A B1900 111.354 107.920 80.170 1.00 51.43 N
ATOM 21 C2 A B1900 110.538 108.910 79.803 1.00 50.53 C
ATOM 22 N3 A B1900 110.742 110.217 79.833 1.00 50.00 N
ATOM 23 C4 A B1900 111.968 110.493 80.308 1.00 50.51 C
ATOM 24 P C B1901 109.543 115.416 83.288 1.00 43.16 P
ATOM 25 OP1 C B1901 108.658 116.607 83.401 1.00 40.01 O
ATOM 26 OP2 C B1901 110.368 115.001 84.451 1.00 41.28 O
ATOM 27 O5' C B1901 108.639 114.167 82.896 1.00 42.87 O
TER
ATOM 2 P C A1898 120.110 111.938 82.520 1.00 46.44 P
ATOM 3 OP1 C A1898 120.561 113.215 83.129 1.00 47.90 O
ATOM 4 OP2 C A1898 120.503 110.652 83.142 1.00 45.96 O
ATOM 5 O5' C A1898 118.524 111.969 82.458 1.00 48.85 O
ATOM 6 C5' C A1898 117.812 113.135 82.003 1.00 48.10 C
ATOM 7 C4' C A1898 116.654 113.410 82.927 1.00 47.89 C
ATOM 8 O4' C A1898 115.864 112.202 83.045 1.00 48.46 O
ATOM 9 C3' C A1898 117.063 113.759 84.346 1.00 47.33 C
ATOM 10 O3' C A1898 117.221 115.171 84.429 1.00 47.86 O
ATOM 11 C2' C A1898 115.886 113.265 85.176 1.00 47.88 C
ATOM 12 O2' C A1898 114.823 114.189 85.212 1.00 49.42 O
ATOM 13 C1' C A1898 115.436 112.039 84.377 1.00 48.48 C
ATOM 14 N1 C A1898 115.900 110.721 84.839 1.00 49.89 N
ATOM 15 C2 C A1898 114.988 109.667 84.851 1.00 51.62 C
ATOM 16 O2 C A1898 113.821 109.879 84.490 1.00 52.34 O
ATOM 17 N3 C A1898 115.397 108.441 85.253 1.00 52.27 N
ATOM 18 C4 C A1898 116.657 108.254 85.639 1.00 50.74 C
ATOM 19 N4 C A1898 117.011 107.032 86.031 1.00 51.03 N
ATOM 20 C5 C A1898 117.609 109.311 85.639 1.00 51.00 C
ATOM 21 C6 C A1898 117.192 110.518 85.238 1.00 50.83 C
ATOM 22 P A A1899 118.091 115.820 85.606 1.00 48.50 P
ATOM 23 OP1 A A1899 119.479 115.963 85.096 1.00 51.47 O
ATOM 24 OP2 A A1899 117.840 115.069 86.867 1.00 47.85 O
ATOM 25 O5' A A1899 117.478 117.278 85.755 1.00 47.19 O
TER
ATOM 1 O3' A B1899 114.607 118.592 82.987 1.00 46.50 O
ATOM 2 P A B1900 114.555 118.177 81.441 1.00 44.48 P
ATOM 3 OP1 A B1900 115.913 118.015 80.886 1.00 43.83 O
ATOM 4 OP2 A B1900 113.627 119.145 80.811 1.00 43.20 O
ATOM 5 O5' A B1900 113.839 116.757 81.405 1.00 45.15 O
ATOM 6 C5' A B1900 113.110 116.431 80.225 1.00 48.96 C
ATOM 7 C4' A B1900 112.239 115.212 80.378 1.00 46.88 C
ATOM 8 O4' A B1900 112.870 114.002 79.950 1.00 47.79 O
ATOM 9 C3' A B1900 111.475 114.757 81.605 1.00 44.70 C
ATOM 10 O3' A B1900 110.461 115.688 81.984 1.00 43.53 O
ATOM 11 C2' A B1900 110.801 113.527 80.993 1.00 46.23 C
ATOM 12 O2' A B1900 109.762 113.927 80.119 1.00 43.95 O
ATOM 13 C1' A B1900 111.902 112.987 80.068 1.00 48.09 C
ATOM 14 N9 A B1900 112.542 111.731 80.453 1.00 50.01 N
ATOM 15 C8 A B1900 113.788 111.509 80.979 1.00 49.93 C
ATOM 16 N7 A B1900 114.065 110.242 81.157 1.00 51.61 N
ATOM 17 C5 A B1900 112.918 109.588 80.730 1.00 51.14 C
ATOM 18 C6 A B1900 112.574 108.230 80.655 1.00 51.51 C
ATOM 19 N6 A B1900 113.380 107.238 81.037 1.00 52.03 N
ATOM 20 N1 A B1900 111.354 107.920 80.170 1.00 51.43 N
ATOM 21 C2 A B1900 110.538 108.910 79.803 1.00 50.53 C
ATOM 22 N3 A B1900 110.742 110.217 79.833 1.00 50.00 N
ATOM 23 C4 A B1900 111.968 110.493 80.308 1.00 50.51 C
ATOM 24 P C B1901 109.543 115.416 83.288 1.00 43.16 P
ATOM 25 OP1 C B1901 108.658 116.607 83.401 1.00 40.01 O
ATOM 26 OP2 C B1901 110.368 115.001 84.451 1.00 41.28 O
ATOM 27 O5' C B1901 108.639 114.167 82.896 1.00 42.87 O
TER
Atoms:
C2: (114.988,109.667,84.851)
OP1: (120.561,113.215,83.129)
OP2: (120.503,110.652,83.142)
C4: (116.657,108.254,85.639)
O5': (118.524,111.969,82.458)
C3': (117.063,113.759,84.346)
C1': (115.436,112.039,84.377)
O4': (115.864,112.202,83.045)
C5': (117.812,113.135,82.003)
P: (120.110,111.938,82.520)
O2: (113.821,109.879,84.490)
C4': (116.654,113.410,82.927)
C2': (115.886,113.265,85.176)
O2': (114.823,114.189,85.212)
N1: (115.900,110.721,84.839)
N3: (115.397,108.441,85.253)
N4: (117.011,107.032,86.031)
C6: (117.192,110.518,85.238)
C5: (117.609,109.311,85.639)
O3': (117.221,115.171,84.429)
OP1: (120.561,113.215,83.129)
OP2: (120.503,110.652,83.142)
C4: (116.657,108.254,85.639)
O5': (118.524,111.969,82.458)
C3': (117.063,113.759,84.346)
C1': (115.436,112.039,84.377)
O4': (115.864,112.202,83.045)
C5': (117.812,113.135,82.003)
P: (120.110,111.938,82.520)
O2: (113.821,109.879,84.490)
C4': (116.654,113.410,82.927)
C2': (115.886,113.265,85.176)
O2': (114.823,114.189,85.212)
N1: (115.900,110.721,84.839)
N3: (115.397,108.441,85.253)
N4: (117.011,107.032,86.031)
C6: (117.192,110.518,85.238)
C5: (117.609,109.311,85.639)
O3': (117.221,115.171,84.429)
OP1: (115.913,118.015,80.886)
OP2: (113.627,119.145,80.811)
C3': (111.475,114.757,81.605)
C1': (111.902,112.987,80.068)
C5': (113.110,116.431,80.225)
O4': (112.870,114.002,79.950)
C8: (113.788,111.509,80.979)
O2': (109.762,113.927,80.119)
C6: (112.574,108.230,80.655)
C5: (112.918,109.588,80.730)
C4: (111.968,110.493,80.308)
P: (114.555,118.177,81.441)
C4': (112.239,115.212,80.378)
C2': (110.801,113.527,80.993)
C2: (110.538,108.910,79.803)
N1: (111.354,107.920,80.170)
N3: (110.742,110.217,79.833)
N6: (113.380,107.238,81.037)
N7: (114.065,110.242,81.157)
N9: (112.542,111.731,80.453)
O5': (113.839,116.757,81.405)
O3': (110.461,115.688,81.984)
OP2: (113.627,119.145,80.811)
C3': (111.475,114.757,81.605)
C1': (111.902,112.987,80.068)
C5': (113.110,116.431,80.225)
O4': (112.870,114.002,79.950)
C8: (113.788,111.509,80.979)
O2': (109.762,113.927,80.119)
C6: (112.574,108.230,80.655)
C5: (112.918,109.588,80.730)
C4: (111.968,110.493,80.308)
P: (114.555,118.177,81.441)
C4': (112.239,115.212,80.378)
C2': (110.801,113.527,80.993)
C2: (110.538,108.910,79.803)
N1: (111.354,107.920,80.170)
N3: (110.742,110.217,79.833)
N6: (113.380,107.238,81.037)
N7: (114.065,110.242,81.157)
N9: (112.542,111.731,80.453)
O5': (113.839,116.757,81.405)
O3': (110.461,115.688,81.984)
Image (generated by PyMOL):