Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01898:01900
Extra
PDB:
ATOM 1 O3' U A1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 2 P C A1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 3 OP1 C A1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 4 OP2 C A1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 5 O5' C A1898 118.808 112.313 83.045 1.00 57.06 O
ATOM 6 C5' C A1898 118.107 113.466 82.546 1.00 57.56 C
ATOM 7 C4' C A1898 116.913 113.750 83.423 1.00 57.57 C
ATOM 8 O4' C A1898 116.128 112.536 83.543 1.00 58.24 O
ATOM 9 C3' C A1898 117.267 114.134 84.850 1.00 57.56 C
ATOM 10 O3' C A1898 117.454 115.550 84.917 1.00 56.59 O
ATOM 11 C2' C A1898 116.051 113.659 85.643 1.00 58.27 C
ATOM 12 O2' C A1898 114.984 114.580 85.627 1.00 58.74 O
ATOM 13 C1' C A1898 115.634 112.409 84.860 1.00 58.95 C
ATOM 14 N1 C A1898 116.092 111.114 85.395 1.00 61.14 N
ATOM 15 C2 C A1898 115.183 110.054 85.460 1.00 63.03 C
ATOM 16 O2 C A1898 114.020 110.233 85.073 1.00 63.74 O
ATOM 17 N3 C A1898 115.595 108.860 85.942 1.00 64.03 N
ATOM 18 C4 C A1898 116.856 108.702 86.345 1.00 62.79 C
ATOM 19 N4 C A1898 117.220 107.507 86.806 1.00 62.97 N
ATOM 20 C5 C A1898 117.800 109.761 86.291 1.00 62.45 C
ATOM 21 C6 C A1898 117.381 110.938 85.814 1.00 62.71 C
ATOM 22 P A A1899 118.315 116.201 86.107 1.00 55.35 P
ATOM 23 OP1 A A1899 119.707 116.339 85.613 1.00 58.15 O
ATOM 24 OP2 A A1899 118.056 115.479 87.377 1.00 55.81 O
ATOM 25 O5' A A1899 117.687 117.651 86.251 1.00 55.08 O
TER
ATOM 1 O3' A B1899 114.910 119.049 83.378 1.00 54.68 O
ATOM 2 P A B1900 114.850 118.567 81.846 1.00 54.18 P
ATOM 3 OP1 A B1900 116.209 118.307 81.320 1.00 54.08 O
ATOM 4 OP2 A B1900 113.985 119.558 81.159 1.00 52.86 O
ATOM 5 O5' A B1900 114.060 117.183 81.859 1.00 54.13 O
ATOM 6 C5' A B1900 113.246 116.881 80.724 1.00 56.42 C
ATOM 7 C4' A B1900 112.438 115.614 80.884 1.00 55.23 C
ATOM 8 O4' A B1900 113.131 114.413 80.525 1.00 55.47 O
ATOM 9 C3' A B1900 111.664 115.163 82.105 1.00 54.59 C
ATOM 10 O3' A B1900 110.601 116.057 82.442 1.00 53.88 O
ATOM 11 C2' A B1900 111.050 113.886 81.520 1.00 55.56 C
ATOM 12 O2' A B1900 109.990 114.207 80.636 1.00 54.20 O
ATOM 13 C1' A B1900 112.182 113.373 80.617 1.00 55.68 C
ATOM 14 N9 A B1900 112.831 112.113 80.978 1.00 55.95 N
ATOM 15 C8 A B1900 114.091 111.878 81.456 1.00 57.04 C
ATOM 16 N7 A B1900 114.370 110.607 81.605 1.00 57.93 N
ATOM 17 C5 A B1900 113.208 109.964 81.206 1.00 58.35 C
ATOM 18 C6 A B1900 112.859 108.604 81.109 1.00 58.99 C
ATOM 19 N6 A B1900 113.682 107.601 81.412 1.00 60.41 N
ATOM 20 N1 A B1900 111.617 108.305 80.681 1.00 58.21 N
ATOM 21 C2 A B1900 110.789 109.304 80.375 1.00 58.68 C
ATOM 22 N3 A B1900 111.001 110.615 80.418 1.00 58.15 N
ATOM 23 C4 A B1900 112.246 110.881 80.842 1.00 57.40 C
ATOM 24 P C B1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 25 OP1 C B1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 26 OP2 C B1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 27 O5' C B1901 108.826 114.585 83.465 1.00 53.47 O
TER
ATOM 2 P C A1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 3 OP1 C A1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 4 OP2 C A1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 5 O5' C A1898 118.808 112.313 83.045 1.00 57.06 O
ATOM 6 C5' C A1898 118.107 113.466 82.546 1.00 57.56 C
ATOM 7 C4' C A1898 116.913 113.750 83.423 1.00 57.57 C
ATOM 8 O4' C A1898 116.128 112.536 83.543 1.00 58.24 O
ATOM 9 C3' C A1898 117.267 114.134 84.850 1.00 57.56 C
ATOM 10 O3' C A1898 117.454 115.550 84.917 1.00 56.59 O
ATOM 11 C2' C A1898 116.051 113.659 85.643 1.00 58.27 C
ATOM 12 O2' C A1898 114.984 114.580 85.627 1.00 58.74 O
ATOM 13 C1' C A1898 115.634 112.409 84.860 1.00 58.95 C
ATOM 14 N1 C A1898 116.092 111.114 85.395 1.00 61.14 N
ATOM 15 C2 C A1898 115.183 110.054 85.460 1.00 63.03 C
ATOM 16 O2 C A1898 114.020 110.233 85.073 1.00 63.74 O
ATOM 17 N3 C A1898 115.595 108.860 85.942 1.00 64.03 N
ATOM 18 C4 C A1898 116.856 108.702 86.345 1.00 62.79 C
ATOM 19 N4 C A1898 117.220 107.507 86.806 1.00 62.97 N
ATOM 20 C5 C A1898 117.800 109.761 86.291 1.00 62.45 C
ATOM 21 C6 C A1898 117.381 110.938 85.814 1.00 62.71 C
ATOM 22 P A A1899 118.315 116.201 86.107 1.00 55.35 P
ATOM 23 OP1 A A1899 119.707 116.339 85.613 1.00 58.15 O
ATOM 24 OP2 A A1899 118.056 115.479 87.377 1.00 55.81 O
ATOM 25 O5' A A1899 117.687 117.651 86.251 1.00 55.08 O
TER
ATOM 1 O3' A B1899 114.910 119.049 83.378 1.00 54.68 O
ATOM 2 P A B1900 114.850 118.567 81.846 1.00 54.18 P
ATOM 3 OP1 A B1900 116.209 118.307 81.320 1.00 54.08 O
ATOM 4 OP2 A B1900 113.985 119.558 81.159 1.00 52.86 O
ATOM 5 O5' A B1900 114.060 117.183 81.859 1.00 54.13 O
ATOM 6 C5' A B1900 113.246 116.881 80.724 1.00 56.42 C
ATOM 7 C4' A B1900 112.438 115.614 80.884 1.00 55.23 C
ATOM 8 O4' A B1900 113.131 114.413 80.525 1.00 55.47 O
ATOM 9 C3' A B1900 111.664 115.163 82.105 1.00 54.59 C
ATOM 10 O3' A B1900 110.601 116.057 82.442 1.00 53.88 O
ATOM 11 C2' A B1900 111.050 113.886 81.520 1.00 55.56 C
ATOM 12 O2' A B1900 109.990 114.207 80.636 1.00 54.20 O
ATOM 13 C1' A B1900 112.182 113.373 80.617 1.00 55.68 C
ATOM 14 N9 A B1900 112.831 112.113 80.978 1.00 55.95 N
ATOM 15 C8 A B1900 114.091 111.878 81.456 1.00 57.04 C
ATOM 16 N7 A B1900 114.370 110.607 81.605 1.00 57.93 N
ATOM 17 C5 A B1900 113.208 109.964 81.206 1.00 58.35 C
ATOM 18 C6 A B1900 112.859 108.604 81.109 1.00 58.99 C
ATOM 19 N6 A B1900 113.682 107.601 81.412 1.00 60.41 N
ATOM 20 N1 A B1900 111.617 108.305 80.681 1.00 58.21 N
ATOM 21 C2 A B1900 110.789 109.304 80.375 1.00 58.68 C
ATOM 22 N3 A B1900 111.001 110.615 80.418 1.00 58.15 N
ATOM 23 C4 A B1900 112.246 110.881 80.842 1.00 57.40 C
ATOM 24 P C B1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 25 OP1 C B1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 26 OP2 C B1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 27 O5' C B1901 108.826 114.585 83.465 1.00 53.47 O
TER
Atoms:
C2: (115.183,110.054,85.460)
OP1: (120.946,113.465,83.638)
OP2: (120.780,110.897,83.566)
C4: (116.856,108.702,86.345)
O5': (118.808,112.313,83.045)
C3': (117.267,114.134,84.850)
C1': (115.634,112.409,84.860)
O4': (116.128,112.536,83.543)
C5': (118.107,113.466,82.546)
P: (120.394,112.228,83.026)
O2: (114.020,110.233,85.073)
C4': (116.913,113.750,83.423)
C2': (116.051,113.659,85.643)
O2': (114.984,114.580,85.627)
N1: (116.092,111.114,85.395)
N3: (115.595,108.860,85.942)
N4: (117.220,107.507,86.806)
C6: (117.381,110.938,85.814)
C5: (117.800,109.761,86.291)
O3': (117.454,115.550,84.917)
OP1: (120.946,113.465,83.638)
OP2: (120.780,110.897,83.566)
C4: (116.856,108.702,86.345)
O5': (118.808,112.313,83.045)
C3': (117.267,114.134,84.850)
C1': (115.634,112.409,84.860)
O4': (116.128,112.536,83.543)
C5': (118.107,113.466,82.546)
P: (120.394,112.228,83.026)
O2: (114.020,110.233,85.073)
C4': (116.913,113.750,83.423)
C2': (116.051,113.659,85.643)
O2': (114.984,114.580,85.627)
N1: (116.092,111.114,85.395)
N3: (115.595,108.860,85.942)
N4: (117.220,107.507,86.806)
C6: (117.381,110.938,85.814)
C5: (117.800,109.761,86.291)
O3': (117.454,115.550,84.917)
OP1: (116.209,118.307,81.320)
OP2: (113.985,119.558,81.159)
C3': (111.664,115.163,82.105)
C1': (112.182,113.373,80.617)
C5': (113.246,116.881,80.724)
O4': (113.131,114.413,80.525)
C8: (114.091,111.878,81.456)
O2': (109.990,114.207,80.636)
C6: (112.859,108.604,81.109)
C5: (113.208,109.964,81.206)
C4: (112.246,110.881,80.842)
P: (114.850,118.567,81.846)
C4': (112.438,115.614,80.884)
C2': (111.050,113.886,81.520)
C2: (110.789,109.304,80.375)
N1: (111.617,108.305,80.681)
N3: (111.001,110.615,80.418)
N6: (113.682,107.601,81.412)
N7: (114.370,110.607,81.605)
N9: (112.831,112.113,80.978)
O5': (114.060,117.183,81.859)
O3': (110.601,116.057,82.442)
OP2: (113.985,119.558,81.159)
C3': (111.664,115.163,82.105)
C1': (112.182,113.373,80.617)
C5': (113.246,116.881,80.724)
O4': (113.131,114.413,80.525)
C8: (114.091,111.878,81.456)
O2': (109.990,114.207,80.636)
C6: (112.859,108.604,81.109)
C5: (113.208,109.964,81.206)
C4: (112.246,110.881,80.842)
P: (114.850,118.567,81.846)
C4': (112.438,115.614,80.884)
C2': (111.050,113.886,81.520)
C2: (110.789,109.304,80.375)
N1: (111.617,108.305,80.681)
N3: (111.001,110.615,80.418)
N6: (113.682,107.601,81.412)
N7: (114.370,110.607,81.605)
N9: (112.831,112.113,80.978)
O5': (114.060,117.183,81.859)
O3': (110.601,116.057,82.442)
Image (generated by PyMOL):