Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01898:01900
Extra
PDB:
ATOM 1 O3' U A1897 120.404 112.093 80.996 1.00 48.32 O
ATOM 2 P C A1898 120.093 112.075 82.564 1.00 48.94 P
ATOM 3 OP1 C A1898 120.652 113.309 83.173 1.00 49.69 O
ATOM 4 OP2 C A1898 120.492 110.751 83.089 1.00 49.10 O
ATOM 5 O5' C A1898 118.509 112.146 82.639 1.00 50.26 O
ATOM 6 C5' C A1898 117.787 113.280 82.142 1.00 50.46 C
ATOM 7 C4' C A1898 116.609 113.549 83.036 1.00 51.33 C
ATOM 8 O4' C A1898 115.817 112.342 83.133 1.00 50.98 O
ATOM 9 C3' C A1898 116.982 113.906 84.463 1.00 50.98 C
ATOM 10 O3' C A1898 117.109 115.324 84.524 1.00 51.92 O
ATOM 11 C2' C A1898 115.781 113.411 85.259 1.00 51.89 C
ATOM 12 O2' C A1898 114.723 114.341 85.241 1.00 53.52 O
ATOM 13 C1' C A1898 115.354 112.180 84.452 1.00 52.47 C
ATOM 14 N1 C A1898 115.815 110.866 84.924 1.00 54.84 N
ATOM 15 C2 C A1898 114.917 109.792 84.904 1.00 56.94 C
ATOM 16 O2 C A1898 113.762 109.976 84.494 1.00 57.72 O
ATOM 17 N3 C A1898 115.329 108.578 85.326 1.00 57.97 N
ATOM 18 C4 C A1898 116.581 108.411 85.749 1.00 57.95 C
ATOM 19 N4 C A1898 116.946 107.196 86.155 1.00 58.94 N
ATOM 20 C5 C A1898 117.516 109.483 85.776 1.00 57.52 C
ATOM 21 C6 C A1898 117.095 110.682 85.363 1.00 56.21 C
ATOM 22 P A A1899 118.031 116.012 85.638 1.00 51.98 P
ATOM 23 OP1 A A1899 119.387 116.182 85.065 1.00 53.48 O
ATOM 24 OP2 A A1899 117.857 115.289 86.919 1.00 50.91 O
ATOM 25 O5' A A1899 117.396 117.460 85.786 1.00 50.79 O
TER
ATOM 1 O3' A B1899 114.533 118.708 82.966 1.00 50.45 O
ATOM 2 P A B1900 114.506 118.273 81.425 1.00 48.75 P
ATOM 3 OP1 A B1900 115.869 117.999 80.925 1.00 49.32 O
ATOM 4 OP2 A B1900 113.679 119.304 80.754 1.00 47.81 O
ATOM 5 O5' A B1900 113.704 116.901 81.382 1.00 49.30 O
ATOM 6 C5' A B1900 112.926 116.634 80.219 1.00 52.59 C
ATOM 7 C4' A B1900 112.070 115.401 80.350 1.00 51.16 C
ATOM 8 O4' A B1900 112.739 114.202 79.936 1.00 52.47 O
ATOM 9 C3' A B1900 111.357 114.937 81.603 1.00 48.90 C
ATOM 10 O3' A B1900 110.331 115.846 81.992 1.00 47.68 O
ATOM 11 C2' A B1900 110.717 113.667 81.037 1.00 50.28 C
ATOM 12 O2' A B1900 109.641 113.996 80.179 1.00 48.25 O
ATOM 13 C1' A B1900 111.813 113.151 80.092 1.00 51.63 C
ATOM 14 N9 A B1900 112.501 111.917 80.473 1.00 51.84 N
ATOM 15 C8 A B1900 113.772 111.734 80.955 1.00 51.52 C
ATOM 16 N7 A B1900 114.082 110.477 81.155 1.00 52.43 N
ATOM 17 C5 A B1900 112.935 109.787 80.788 1.00 52.17 C
ATOM 18 C6 A B1900 112.618 108.419 80.761 1.00 52.11 C
ATOM 19 N6 A B1900 113.454 107.453 81.136 1.00 53.52 N
ATOM 20 N1 A B1900 111.391 108.070 80.330 1.00 51.89 N
ATOM 21 C2 A B1900 110.542 109.031 79.964 1.00 50.78 C
ATOM 22 N3 A B1900 110.717 110.342 79.951 1.00 51.04 N
ATOM 23 C4 A B1900 111.952 110.660 80.376 1.00 51.64 C
ATOM 24 P C B1901 109.473 115.576 83.330 1.00 47.71 P
ATOM 25 OP1 C B1901 108.593 116.759 83.521 1.00 46.25 O
ATOM 26 OP2 C B1901 110.366 115.142 84.427 1.00 46.55 O
ATOM 27 O5' C B1901 108.539 114.343 82.964 1.00 48.80 O
TER
ATOM 2 P C A1898 120.093 112.075 82.564 1.00 48.94 P
ATOM 3 OP1 C A1898 120.652 113.309 83.173 1.00 49.69 O
ATOM 4 OP2 C A1898 120.492 110.751 83.089 1.00 49.10 O
ATOM 5 O5' C A1898 118.509 112.146 82.639 1.00 50.26 O
ATOM 6 C5' C A1898 117.787 113.280 82.142 1.00 50.46 C
ATOM 7 C4' C A1898 116.609 113.549 83.036 1.00 51.33 C
ATOM 8 O4' C A1898 115.817 112.342 83.133 1.00 50.98 O
ATOM 9 C3' C A1898 116.982 113.906 84.463 1.00 50.98 C
ATOM 10 O3' C A1898 117.109 115.324 84.524 1.00 51.92 O
ATOM 11 C2' C A1898 115.781 113.411 85.259 1.00 51.89 C
ATOM 12 O2' C A1898 114.723 114.341 85.241 1.00 53.52 O
ATOM 13 C1' C A1898 115.354 112.180 84.452 1.00 52.47 C
ATOM 14 N1 C A1898 115.815 110.866 84.924 1.00 54.84 N
ATOM 15 C2 C A1898 114.917 109.792 84.904 1.00 56.94 C
ATOM 16 O2 C A1898 113.762 109.976 84.494 1.00 57.72 O
ATOM 17 N3 C A1898 115.329 108.578 85.326 1.00 57.97 N
ATOM 18 C4 C A1898 116.581 108.411 85.749 1.00 57.95 C
ATOM 19 N4 C A1898 116.946 107.196 86.155 1.00 58.94 N
ATOM 20 C5 C A1898 117.516 109.483 85.776 1.00 57.52 C
ATOM 21 C6 C A1898 117.095 110.682 85.363 1.00 56.21 C
ATOM 22 P A A1899 118.031 116.012 85.638 1.00 51.98 P
ATOM 23 OP1 A A1899 119.387 116.182 85.065 1.00 53.48 O
ATOM 24 OP2 A A1899 117.857 115.289 86.919 1.00 50.91 O
ATOM 25 O5' A A1899 117.396 117.460 85.786 1.00 50.79 O
TER
ATOM 1 O3' A B1899 114.533 118.708 82.966 1.00 50.45 O
ATOM 2 P A B1900 114.506 118.273 81.425 1.00 48.75 P
ATOM 3 OP1 A B1900 115.869 117.999 80.925 1.00 49.32 O
ATOM 4 OP2 A B1900 113.679 119.304 80.754 1.00 47.81 O
ATOM 5 O5' A B1900 113.704 116.901 81.382 1.00 49.30 O
ATOM 6 C5' A B1900 112.926 116.634 80.219 1.00 52.59 C
ATOM 7 C4' A B1900 112.070 115.401 80.350 1.00 51.16 C
ATOM 8 O4' A B1900 112.739 114.202 79.936 1.00 52.47 O
ATOM 9 C3' A B1900 111.357 114.937 81.603 1.00 48.90 C
ATOM 10 O3' A B1900 110.331 115.846 81.992 1.00 47.68 O
ATOM 11 C2' A B1900 110.717 113.667 81.037 1.00 50.28 C
ATOM 12 O2' A B1900 109.641 113.996 80.179 1.00 48.25 O
ATOM 13 C1' A B1900 111.813 113.151 80.092 1.00 51.63 C
ATOM 14 N9 A B1900 112.501 111.917 80.473 1.00 51.84 N
ATOM 15 C8 A B1900 113.772 111.734 80.955 1.00 51.52 C
ATOM 16 N7 A B1900 114.082 110.477 81.155 1.00 52.43 N
ATOM 17 C5 A B1900 112.935 109.787 80.788 1.00 52.17 C
ATOM 18 C6 A B1900 112.618 108.419 80.761 1.00 52.11 C
ATOM 19 N6 A B1900 113.454 107.453 81.136 1.00 53.52 N
ATOM 20 N1 A B1900 111.391 108.070 80.330 1.00 51.89 N
ATOM 21 C2 A B1900 110.542 109.031 79.964 1.00 50.78 C
ATOM 22 N3 A B1900 110.717 110.342 79.951 1.00 51.04 N
ATOM 23 C4 A B1900 111.952 110.660 80.376 1.00 51.64 C
ATOM 24 P C B1901 109.473 115.576 83.330 1.00 47.71 P
ATOM 25 OP1 C B1901 108.593 116.759 83.521 1.00 46.25 O
ATOM 26 OP2 C B1901 110.366 115.142 84.427 1.00 46.55 O
ATOM 27 O5' C B1901 108.539 114.343 82.964 1.00 48.80 O
TER
Atoms:
C2: (114.917,109.792,84.904)
OP1: (120.652,113.309,83.173)
OP2: (120.492,110.751,83.089)
C4: (116.581,108.411,85.749)
O5': (118.509,112.146,82.639)
C3': (116.982,113.906,84.463)
C1': (115.354,112.180,84.452)
O4': (115.817,112.342,83.133)
C5': (117.787,113.280,82.142)
P: (120.093,112.075,82.564)
O2: (113.762,109.976,84.494)
C4': (116.609,113.549,83.036)
C2': (115.781,113.411,85.259)
O2': (114.723,114.341,85.241)
N1: (115.815,110.866,84.924)
N3: (115.329,108.578,85.326)
N4: (116.946,107.196,86.155)
C6: (117.095,110.682,85.363)
C5: (117.516,109.483,85.776)
O3': (117.109,115.324,84.524)
OP1: (120.652,113.309,83.173)
OP2: (120.492,110.751,83.089)
C4: (116.581,108.411,85.749)
O5': (118.509,112.146,82.639)
C3': (116.982,113.906,84.463)
C1': (115.354,112.180,84.452)
O4': (115.817,112.342,83.133)
C5': (117.787,113.280,82.142)
P: (120.093,112.075,82.564)
O2: (113.762,109.976,84.494)
C4': (116.609,113.549,83.036)
C2': (115.781,113.411,85.259)
O2': (114.723,114.341,85.241)
N1: (115.815,110.866,84.924)
N3: (115.329,108.578,85.326)
N4: (116.946,107.196,86.155)
C6: (117.095,110.682,85.363)
C5: (117.516,109.483,85.776)
O3': (117.109,115.324,84.524)
OP1: (115.869,117.999,80.925)
OP2: (113.679,119.304,80.754)
C3': (111.357,114.937,81.603)
C1': (111.813,113.151,80.092)
C5': (112.926,116.634,80.219)
O4': (112.739,114.202,79.936)
C8: (113.772,111.734,80.955)
O2': (109.641,113.996,80.179)
C6: (112.618,108.419,80.761)
C5: (112.935,109.787,80.788)
C4: (111.952,110.660,80.376)
P: (114.506,118.273,81.425)
C4': (112.070,115.401,80.350)
C2': (110.717,113.667,81.037)
C2: (110.542,109.031,79.964)
N1: (111.391,108.070,80.330)
N3: (110.717,110.342,79.951)
N6: (113.454,107.453,81.136)
N7: (114.082,110.477,81.155)
N9: (112.501,111.917,80.473)
O5': (113.704,116.901,81.382)
O3': (110.331,115.846,81.992)
OP2: (113.679,119.304,80.754)
C3': (111.357,114.937,81.603)
C1': (111.813,113.151,80.092)
C5': (112.926,116.634,80.219)
O4': (112.739,114.202,79.936)
C8: (113.772,111.734,80.955)
O2': (109.641,113.996,80.179)
C6: (112.618,108.419,80.761)
C5: (112.935,109.787,80.788)
C4: (111.952,110.660,80.376)
P: (114.506,118.273,81.425)
C4': (112.070,115.401,80.350)
C2': (110.717,113.667,81.037)
C2: (110.542,109.031,79.964)
N1: (111.391,108.070,80.330)
N3: (110.717,110.342,79.951)
N6: (113.454,107.453,81.136)
N7: (114.082,110.477,81.155)
N9: (112.501,111.917,80.473)
O5': (113.704,116.901,81.382)
O3': (110.331,115.846,81.992)
Image (generated by PyMOL):