Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01898:01900
Extra
PDB:
ATOM 1 O3' U A1897 120.287 111.778 80.998 1.00 41.23 O
ATOM 2 P C A1898 119.870 111.794 82.541 1.00 41.38 P
ATOM 3 OP1 C A1898 120.312 113.085 83.118 1.00 42.88 O
ATOM 4 OP2 C A1898 120.323 110.526 83.152 1.00 41.35 O
ATOM 5 O5' C A1898 118.281 111.798 82.509 1.00 42.80 O
ATOM 6 C5' C A1898 117.546 112.941 82.030 1.00 43.47 C
ATOM 7 C4' C A1898 116.393 113.239 82.962 1.00 43.83 C
ATOM 8 O4' C A1898 115.579 112.045 83.097 1.00 44.06 O
ATOM 9 C3' C A1898 116.797 113.618 84.380 1.00 43.03 C
ATOM 10 O3' C A1898 116.988 115.033 84.445 1.00 42.74 O
ATOM 11 C2' C A1898 115.604 113.147 85.208 1.00 43.64 C
ATOM 12 O2' C A1898 114.537 114.071 85.218 1.00 42.53 O
ATOM 13 C1' C A1898 115.167 111.894 84.439 1.00 44.27 C
ATOM 14 N1 C A1898 115.692 110.602 84.921 1.00 45.80 N
ATOM 15 C2 C A1898 114.813 109.517 85.027 1.00 45.94 C
ATOM 16 O2 C A1898 113.617 109.680 84.743 1.00 46.32 O
ATOM 17 N3 C A1898 115.289 108.317 85.434 1.00 46.21 N
ATOM 18 C4 C A1898 116.584 108.177 85.728 1.00 46.81 C
ATOM 19 N4 C A1898 117.015 106.970 86.102 1.00 46.61 N
ATOM 20 C5 C A1898 117.498 109.267 85.644 1.00 46.78 C
ATOM 21 C6 C A1898 117.015 110.450 85.242 1.00 46.84 C
ATOM 22 P A A1899 117.885 115.686 85.609 1.00 43.79 P
ATOM 23 OP1 A A1899 119.267 115.840 85.093 1.00 44.37 O
ATOM 24 OP2 A A1899 117.656 114.950 86.875 1.00 43.07 O
ATOM 25 O5' A A1899 117.260 117.144 85.758 1.00 42.63 O
TER
ATOM 1 O3' A B1899 114.323 118.521 83.016 1.00 41.56 O
ATOM 2 P A B1900 114.256 118.100 81.467 1.00 39.43 P
ATOM 3 OP1 A B1900 115.609 117.844 80.929 1.00 39.00 O
ATOM 4 OP2 A B1900 113.397 119.115 80.815 1.00 39.15 O
ATOM 5 O5' A B1900 113.458 116.723 81.426 1.00 40.36 O
ATOM 6 C5' A B1900 112.752 116.408 80.225 1.00 44.51 C
ATOM 7 C4' A B1900 111.879 115.182 80.355 1.00 43.57 C
ATOM 8 O4' A B1900 112.519 113.969 79.920 1.00 43.79 O
ATOM 9 C3' A B1900 111.186 114.725 81.618 1.00 41.43 C
ATOM 10 O3' A B1900 110.168 115.635 82.028 1.00 39.67 O
ATOM 11 C2' A B1900 110.525 113.454 81.077 1.00 42.85 C
ATOM 12 O2' A B1900 109.401 113.779 80.285 1.00 42.88 O
ATOM 13 C1' A B1900 111.578 112.936 80.087 1.00 42.77 C
ATOM 14 N9 A B1900 112.246 111.685 80.442 1.00 43.84 N
ATOM 15 C8 A B1900 113.503 111.458 80.940 1.00 44.12 C
ATOM 16 N7 A B1900 113.777 110.189 81.121 1.00 44.00 N
ATOM 17 C5 A B1900 112.620 109.538 80.719 1.00 43.83 C
ATOM 18 C6 A B1900 112.266 108.181 80.663 1.00 44.28 C
ATOM 19 N6 A B1900 113.068 107.183 81.034 1.00 44.98 N
ATOM 20 N1 A B1900 111.035 107.875 80.206 1.00 44.75 N
ATOM 21 C2 A B1900 110.218 108.867 79.843 1.00 44.83 C
ATOM 22 N3 A B1900 110.432 110.174 79.854 1.00 44.59 N
ATOM 23 C4 A B1900 111.669 110.447 80.305 1.00 44.18 C
ATOM 24 P C B1901 109.333 115.356 83.378 1.00 38.59 P
ATOM 25 OP1 C B1901 108.456 116.536 83.605 1.00 38.17 O
ATOM 26 OP2 C B1901 110.276 114.933 84.433 1.00 38.35 O
ATOM 27 O5' C B1901 108.395 114.117 83.022 1.00 38.50 O
TER
ATOM 2 P C A1898 119.870 111.794 82.541 1.00 41.38 P
ATOM 3 OP1 C A1898 120.312 113.085 83.118 1.00 42.88 O
ATOM 4 OP2 C A1898 120.323 110.526 83.152 1.00 41.35 O
ATOM 5 O5' C A1898 118.281 111.798 82.509 1.00 42.80 O
ATOM 6 C5' C A1898 117.546 112.941 82.030 1.00 43.47 C
ATOM 7 C4' C A1898 116.393 113.239 82.962 1.00 43.83 C
ATOM 8 O4' C A1898 115.579 112.045 83.097 1.00 44.06 O
ATOM 9 C3' C A1898 116.797 113.618 84.380 1.00 43.03 C
ATOM 10 O3' C A1898 116.988 115.033 84.445 1.00 42.74 O
ATOM 11 C2' C A1898 115.604 113.147 85.208 1.00 43.64 C
ATOM 12 O2' C A1898 114.537 114.071 85.218 1.00 42.53 O
ATOM 13 C1' C A1898 115.167 111.894 84.439 1.00 44.27 C
ATOM 14 N1 C A1898 115.692 110.602 84.921 1.00 45.80 N
ATOM 15 C2 C A1898 114.813 109.517 85.027 1.00 45.94 C
ATOM 16 O2 C A1898 113.617 109.680 84.743 1.00 46.32 O
ATOM 17 N3 C A1898 115.289 108.317 85.434 1.00 46.21 N
ATOM 18 C4 C A1898 116.584 108.177 85.728 1.00 46.81 C
ATOM 19 N4 C A1898 117.015 106.970 86.102 1.00 46.61 N
ATOM 20 C5 C A1898 117.498 109.267 85.644 1.00 46.78 C
ATOM 21 C6 C A1898 117.015 110.450 85.242 1.00 46.84 C
ATOM 22 P A A1899 117.885 115.686 85.609 1.00 43.79 P
ATOM 23 OP1 A A1899 119.267 115.840 85.093 1.00 44.37 O
ATOM 24 OP2 A A1899 117.656 114.950 86.875 1.00 43.07 O
ATOM 25 O5' A A1899 117.260 117.144 85.758 1.00 42.63 O
TER
ATOM 1 O3' A B1899 114.323 118.521 83.016 1.00 41.56 O
ATOM 2 P A B1900 114.256 118.100 81.467 1.00 39.43 P
ATOM 3 OP1 A B1900 115.609 117.844 80.929 1.00 39.00 O
ATOM 4 OP2 A B1900 113.397 119.115 80.815 1.00 39.15 O
ATOM 5 O5' A B1900 113.458 116.723 81.426 1.00 40.36 O
ATOM 6 C5' A B1900 112.752 116.408 80.225 1.00 44.51 C
ATOM 7 C4' A B1900 111.879 115.182 80.355 1.00 43.57 C
ATOM 8 O4' A B1900 112.519 113.969 79.920 1.00 43.79 O
ATOM 9 C3' A B1900 111.186 114.725 81.618 1.00 41.43 C
ATOM 10 O3' A B1900 110.168 115.635 82.028 1.00 39.67 O
ATOM 11 C2' A B1900 110.525 113.454 81.077 1.00 42.85 C
ATOM 12 O2' A B1900 109.401 113.779 80.285 1.00 42.88 O
ATOM 13 C1' A B1900 111.578 112.936 80.087 1.00 42.77 C
ATOM 14 N9 A B1900 112.246 111.685 80.442 1.00 43.84 N
ATOM 15 C8 A B1900 113.503 111.458 80.940 1.00 44.12 C
ATOM 16 N7 A B1900 113.777 110.189 81.121 1.00 44.00 N
ATOM 17 C5 A B1900 112.620 109.538 80.719 1.00 43.83 C
ATOM 18 C6 A B1900 112.266 108.181 80.663 1.00 44.28 C
ATOM 19 N6 A B1900 113.068 107.183 81.034 1.00 44.98 N
ATOM 20 N1 A B1900 111.035 107.875 80.206 1.00 44.75 N
ATOM 21 C2 A B1900 110.218 108.867 79.843 1.00 44.83 C
ATOM 22 N3 A B1900 110.432 110.174 79.854 1.00 44.59 N
ATOM 23 C4 A B1900 111.669 110.447 80.305 1.00 44.18 C
ATOM 24 P C B1901 109.333 115.356 83.378 1.00 38.59 P
ATOM 25 OP1 C B1901 108.456 116.536 83.605 1.00 38.17 O
ATOM 26 OP2 C B1901 110.276 114.933 84.433 1.00 38.35 O
ATOM 27 O5' C B1901 108.395 114.117 83.022 1.00 38.50 O
TER
Atoms:
C2: (114.813,109.517,85.027)
OP1: (120.312,113.085,83.118)
OP2: (120.323,110.526,83.152)
C4: (116.584,108.177,85.728)
O5': (118.281,111.798,82.509)
C3': (116.797,113.618,84.380)
C1': (115.167,111.894,84.439)
O4': (115.579,112.045,83.097)
C5': (117.546,112.941,82.030)
P: (119.870,111.794,82.541)
O2: (113.617,109.680,84.743)
C4': (116.393,113.239,82.962)
C2': (115.604,113.147,85.208)
O2': (114.537,114.071,85.218)
N1: (115.692,110.602,84.921)
N3: (115.289,108.317,85.434)
N4: (117.015,106.970,86.102)
C6: (117.015,110.450,85.242)
C5: (117.498,109.267,85.644)
O3': (116.988,115.033,84.445)
OP1: (120.312,113.085,83.118)
OP2: (120.323,110.526,83.152)
C4: (116.584,108.177,85.728)
O5': (118.281,111.798,82.509)
C3': (116.797,113.618,84.380)
C1': (115.167,111.894,84.439)
O4': (115.579,112.045,83.097)
C5': (117.546,112.941,82.030)
P: (119.870,111.794,82.541)
O2: (113.617,109.680,84.743)
C4': (116.393,113.239,82.962)
C2': (115.604,113.147,85.208)
O2': (114.537,114.071,85.218)
N1: (115.692,110.602,84.921)
N3: (115.289,108.317,85.434)
N4: (117.015,106.970,86.102)
C6: (117.015,110.450,85.242)
C5: (117.498,109.267,85.644)
O3': (116.988,115.033,84.445)
OP1: (115.609,117.844,80.929)
OP2: (113.397,119.115,80.815)
C3': (111.186,114.725,81.618)
C1': (111.578,112.936,80.087)
C5': (112.752,116.408,80.225)
O4': (112.519,113.969,79.920)
C8: (113.503,111.458,80.940)
O2': (109.401,113.779,80.285)
C6: (112.266,108.181,80.663)
C5: (112.620,109.538,80.719)
C4: (111.669,110.447,80.305)
P: (114.256,118.100,81.467)
C4': (111.879,115.182,80.355)
C2': (110.525,113.454,81.077)
C2: (110.218,108.867,79.843)
N1: (111.035,107.875,80.206)
N3: (110.432,110.174,79.854)
N6: (113.068,107.183,81.034)
N7: (113.777,110.189,81.121)
N9: (112.246,111.685,80.442)
O5': (113.458,116.723,81.426)
O3': (110.168,115.635,82.028)
OP2: (113.397,119.115,80.815)
C3': (111.186,114.725,81.618)
C1': (111.578,112.936,80.087)
C5': (112.752,116.408,80.225)
O4': (112.519,113.969,79.920)
C8: (113.503,111.458,80.940)
O2': (109.401,113.779,80.285)
C6: (112.266,108.181,80.663)
C5: (112.620,109.538,80.719)
C4: (111.669,110.447,80.305)
P: (114.256,118.100,81.467)
C4': (111.879,115.182,80.355)
C2': (110.525,113.454,81.077)
C2: (110.218,108.867,79.843)
N1: (111.035,107.875,80.206)
N3: (110.432,110.174,79.854)
N6: (113.068,107.183,81.034)
N7: (113.777,110.189,81.121)
N9: (112.246,111.685,80.442)
O5': (113.458,116.723,81.426)
O3': (110.168,115.635,82.028)
Image (generated by PyMOL):