Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0129:0130
Extra
PDB:
ATOM 1 O3' G A 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 2 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C A 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C A 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C A 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C A 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C A 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C A 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C A 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C A 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C A 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C A 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C A 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C A 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C A 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C A 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C A 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C A 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G A 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G A 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G A 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G A 130 85.975 149.478 14.005 1.00 50.94 O
TER
ATOM 1 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 2 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 3 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 4 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 5 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
ATOM 6 C5' G B 130 85.877 149.998 12.675 1.00 49.09 C
ATOM 7 C4' G B 130 85.704 148.864 11.689 1.00 49.63 C
ATOM 8 O4' G B 130 86.950 148.134 11.533 1.00 50.02 O
ATOM 9 C3' G B 130 84.714 147.790 12.098 1.00 48.98 C
ATOM 10 O3' G B 130 83.377 148.166 11.836 1.00 50.04 O
ATOM 11 C2' G B 130 85.147 146.611 11.246 1.00 48.37 C
ATOM 12 O2' G B 130 84.691 146.736 9.921 1.00 47.59 O
ATOM 13 C1' G B 130 86.668 146.769 11.270 1.00 48.49 C
ATOM 14 N9 G B 130 87.346 145.947 12.270 1.00 48.71 N
ATOM 15 C8 G B 130 88.102 146.383 13.334 1.00 49.87 C
ATOM 16 N7 G B 130 88.653 145.408 14.006 1.00 49.87 N
ATOM 17 C5 G B 130 88.221 144.256 13.359 1.00 48.93 C
ATOM 18 C6 G B 130 88.507 142.887 13.620 1.00 48.54 C
ATOM 19 O6 G B 130 89.237 142.403 14.497 1.00 47.62 O
ATOM 20 N1 G B 130 87.848 142.048 12.726 1.00 47.63 N
ATOM 21 C2 G B 130 87.024 142.467 11.711 1.00 47.52 C
ATOM 22 N2 G B 130 86.473 141.507 10.960 1.00 47.44 N
ATOM 23 N3 G B 130 86.757 143.734 11.452 1.00 48.75 N
ATOM 24 C4 G B 130 87.389 144.570 12.304 1.00 48.66 C
ATOM 25 P C B 131 82.194 147.492 12.682 1.00 50.18 P
ATOM 26 OP1 C B 131 80.906 148.060 12.209 1.00 49.41 O
ATOM 27 OP2 C B 131 82.550 147.570 14.129 1.00 48.94 O
ATOM 28 O5' C B 131 82.242 145.973 12.220 1.00 47.87 O
TER
ATOM 2 P C A 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C A 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C A 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C A 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C A 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C A 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C A 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C A 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C A 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C A 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C A 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C A 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C A 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C A 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C A 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C A 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C A 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C A 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C A 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C A 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G A 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G A 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G A 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G A 130 85.975 149.478 14.005 1.00 50.94 O
TER
ATOM 1 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 2 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 3 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 4 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 5 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
ATOM 6 C5' G B 130 85.877 149.998 12.675 1.00 49.09 C
ATOM 7 C4' G B 130 85.704 148.864 11.689 1.00 49.63 C
ATOM 8 O4' G B 130 86.950 148.134 11.533 1.00 50.02 O
ATOM 9 C3' G B 130 84.714 147.790 12.098 1.00 48.98 C
ATOM 10 O3' G B 130 83.377 148.166 11.836 1.00 50.04 O
ATOM 11 C2' G B 130 85.147 146.611 11.246 1.00 48.37 C
ATOM 12 O2' G B 130 84.691 146.736 9.921 1.00 47.59 O
ATOM 13 C1' G B 130 86.668 146.769 11.270 1.00 48.49 C
ATOM 14 N9 G B 130 87.346 145.947 12.270 1.00 48.71 N
ATOM 15 C8 G B 130 88.102 146.383 13.334 1.00 49.87 C
ATOM 16 N7 G B 130 88.653 145.408 14.006 1.00 49.87 N
ATOM 17 C5 G B 130 88.221 144.256 13.359 1.00 48.93 C
ATOM 18 C6 G B 130 88.507 142.887 13.620 1.00 48.54 C
ATOM 19 O6 G B 130 89.237 142.403 14.497 1.00 47.62 O
ATOM 20 N1 G B 130 87.848 142.048 12.726 1.00 47.63 N
ATOM 21 C2 G B 130 87.024 142.467 11.711 1.00 47.52 C
ATOM 22 N2 G B 130 86.473 141.507 10.960 1.00 47.44 N
ATOM 23 N3 G B 130 86.757 143.734 11.452 1.00 48.75 N
ATOM 24 C4 G B 130 87.389 144.570 12.304 1.00 48.66 C
ATOM 25 P C B 131 82.194 147.492 12.682 1.00 50.18 P
ATOM 26 OP1 C B 131 80.906 148.060 12.209 1.00 49.41 O
ATOM 27 OP2 C B 131 82.550 147.570 14.129 1.00 48.94 O
ATOM 28 O5' C B 131 82.242 145.973 12.220 1.00 47.87 O
TER
Atoms:
C2: (87.487,144.424,19.012)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
OP1: (88.378,150.112,14.235)
OP2: (86.568,151.115,15.782)
C3': (84.714,147.790,12.098)
C1': (86.668,146.769,11.270)
C5': (85.877,149.998,12.675)
O6: (89.237,142.403,14.497)
O4': (86.950,148.134,11.533)
C8: (88.102,146.383,13.334)
C2: (87.024,142.467,11.711)
C6: (88.507,142.887,13.620)
C5: (88.221,144.256,13.359)
C4: (87.389,144.570,12.304)
P: (87.112,149.962,15.009)
C4': (85.704,148.864,11.689)
C2': (85.147,146.611,11.246)
O2': (84.691,146.736,9.921)
N1: (87.848,142.048,12.726)
N2: (86.473,141.507,10.960)
N3: (86.757,143.734,11.452)
N7: (88.653,145.408,14.006)
N9: (87.346,145.947,12.270)
O5': (85.975,149.478,14.005)
O3': (83.377,148.166,11.836)
OP2: (86.568,151.115,15.782)
C3': (84.714,147.790,12.098)
C1': (86.668,146.769,11.270)
C5': (85.877,149.998,12.675)
O6: (89.237,142.403,14.497)
O4': (86.950,148.134,11.533)
C8: (88.102,146.383,13.334)
C2: (87.024,142.467,11.711)
C6: (88.507,142.887,13.620)
C5: (88.221,144.256,13.359)
C4: (87.389,144.570,12.304)
P: (87.112,149.962,15.009)
C4': (85.704,148.864,11.689)
C2': (85.147,146.611,11.246)
O2': (84.691,146.736,9.921)
N1: (87.848,142.048,12.726)
N2: (86.473,141.507,10.960)
N3: (86.757,143.734,11.452)
N7: (88.653,145.408,14.006)
N9: (87.346,145.947,12.270)
O5': (85.975,149.478,14.005)
O3': (83.377,148.166,11.836)
Image (generated by PyMOL):