ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1787:A1782

Extra

PDB:
ATOM 1 O3' A A1786 -65.511 -38.688 3.930 1.00 21.52 O
ATOM 2 P A A1787 -63.953 -38.711 3.541 1.00 38.32 P
ATOM 3 OP1 A A1787 -63.940 -38.718 2.046 1.00 34.45 O
ATOM 4 OP2 A A1787 -63.196 -39.704 4.374 1.00 29.74 O
ATOM 5 O5' A A1787 -63.466 -37.269 4.019 1.00 42.84 O
ATOM 6 C5' A A1787 -64.335 -36.190 3.736 1.00 37.57 C
ATOM 7 C4' A A1787 -63.571 -34.942 3.379 1.00 33.80 C
ATOM 8 O4' A A1787 -63.295 -34.287 4.624 1.00 35.44 O
ATOM 9 C3' A A1787 -62.199 -35.111 2.738 1.00 37.60 C
ATOM 10 O3' A A1787 -61.803 -33.873 2.173 1.00 42.61 O
ATOM 11 C2' A A1787 -61.311 -35.414 3.935 1.00 37.69 C
ATOM 12 O2' A A1787 -59.981 -34.983 3.738 1.00 45.02 O
ATOM 13 C1' A A1787 -61.953 -34.533 4.991 1.00 42.05 C
ATOM 14 N9 A A1787 -61.967 -35.152 6.299 1.00 46.12 N
ATOM 15 C8 A A1787 -63.056 -35.497 7.049 1.00 53.66 C
ATOM 16 N7 A A1787 -62.750 -36.036 8.206 1.00 48.22 N
ATOM 17 C5 A A1787 -61.368 -36.038 8.198 1.00 37.22 C
ATOM 18 C6 A A1787 -60.426 -36.478 9.138 1.00 38.36 C
ATOM 19 N6 A A1787 -60.754 -37.033 10.312 1.00 40.96 N
ATOM 20 N1 A A1787 -59.129 -36.323 8.811 1.00 39.50 N
ATOM 21 C2 A A1787 -58.814 -35.768 7.635 1.00 35.60 C
ATOM 22 N3 A A1787 -59.609 -35.322 6.672 1.00 28.28 N
ATOM 23 C4 A A1787 -60.875 -35.494 7.030 1.00 33.20 C
ATOM 24 P A A1788 -62.291 -33.455 0.701 1.00 36.23 P
ATOM 25 OP1 A A1788 -62.464 -34.713 -0.069 1.00 28.44 O
ATOM 26 OP2 A A1788 -61.409 -32.361 0.212 1.00 29.46 O
ATOM 27 O5' A A1788 -63.742 -32.834 0.995 1.00 29.39 O
TER

ATOM 1 O3' U B1781 -60.079 -36.447 13.926 1.00 26.85 O
ATOM 2 P U B1782 -59.658 -37.938 13.558 1.00 42.76 P
ATOM 3 OP1 U B1782 -59.050 -38.562 14.753 1.00 18.32 O
ATOM 4 OP2 U B1782 -59.013 -37.944 12.222 1.00 26.55 O
ATOM 5 O5' U B1782 -61.073 -38.614 13.396 1.00 26.55 O
ATOM 6 C5' U B1782 -61.808 -38.865 14.571 1.00 25.06 C
ATOM 7 C4' U B1782 -63.147 -39.409 14.143 1.00 25.36 C
ATOM 8 O4' U B1782 -63.909 -38.334 13.568 1.00 35.80 O
ATOM 9 C3' U B1782 -63.077 -40.361 12.974 1.00 29.27 C
ATOM 10 O3' U B1782 -62.802 -41.676 13.425 1.00 40.02 O
ATOM 11 C2' U B1782 -64.487 -40.291 12.413 1.00 30.19 C
ATOM 12 O2' U B1782 -65.299 -41.345 12.897 1.00 34.73 O
ATOM 13 C1' U B1782 -64.998 -38.945 12.925 1.00 38.75 C
ATOM 14 N1 U B1782 -65.455 -38.102 11.813 1.00 33.39 N
ATOM 15 C2 U B1782 -64.528 -37.751 10.852 1.00 32.53 C
ATOM 16 O2 U B1782 -63.357 -38.085 10.895 1.00 34.69 O
ATOM 17 N3 U B1782 -65.023 -36.983 9.834 1.00 26.83 N
ATOM 18 C4 U B1782 -66.339 -36.562 9.692 1.00 28.84 C
ATOM 19 O4 U B1782 -66.663 -35.879 8.712 1.00 25.37 O
ATOM 20 C5 U B1782 -67.239 -36.988 10.746 1.00 32.83 C
ATOM 21 C6 U B1782 -66.778 -37.728 11.752 1.00 25.07 C
ATOM 22 P A B1783 -62.026 -42.695 12.442 1.00 28.67 P
ATOM 23 OP1 A B1783 -62.650 -42.640 11.078 1.00 33.17 O
ATOM 24 OP2 A B1783 -61.930 -43.971 13.199 1.00 24.49 O
ATOM 25 O5' A B1783 -60.538 -42.052 12.399 1.00 27.81 O
TER

Atoms:
OP1: (-63.940,-38.718,2.046)
OP2: (-63.196,-39.704,4.374)
C3': (-62.199,-35.111,2.738)
C1': (-61.953,-34.533,4.991)
C5': (-64.335,-36.190,3.736)
O4': (-63.295,-34.287,4.624)
C8: (-63.056,-35.497,7.049)
O2': (-59.981,-34.983,3.738)
C6: (-60.426,-36.478,9.138)
C5: (-61.368,-36.038,8.198)
C4: (-60.875,-35.494,7.030)
P: (-63.953,-38.711,3.541)
C4': (-63.571,-34.942,3.379)
C2': (-61.311,-35.414,3.935)
C2: (-58.814,-35.768,7.635)
N1: (-59.129,-36.323,8.811)
N3: (-59.609,-35.322,6.672)
N6: (-60.754,-37.033,10.312)
N7: (-62.750,-36.036,8.206)
N9: (-61.967,-35.152,6.299)
O5': (-63.466,-37.269,4.019)
O3': (-61.803,-33.873,2.173)
C4: (-66.339,-36.562,9.692)
N3: (-65.023,-36.983,9.834)
OP1: (-59.050,-38.562,14.753)
OP2: (-59.013,-37.944,12.222)
C2: (-64.528,-37.751,10.852)
C1': (-64.998,-38.945,12.925)
C3': (-63.077,-40.361,12.974)
O5': (-61.073,-38.614,13.396)
O4': (-63.909,-38.334,13.568)
C5': (-61.808,-38.865,14.571)
P: (-59.658,-37.938,13.558)
C4': (-63.147,-39.409,14.143)
C2': (-64.487,-40.291,12.413)
O2': (-65.299,-41.345,12.897)
N1: (-65.455,-38.102,11.813)
O4: (-66.663,-35.879,8.712)
O2: (-63.357,-38.085,10.895)
C6: (-66.778,-37.728,11.752)
C5: (-67.239,-36.988,10.746)
O3': (-62.802,-41.676,13.425)
Image (generated by PyMOL):
PyMOL image
show in jmol