Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A557:A577
Extra
PDB:
ATOM 1 O3' G A 556 0.248 94.276 112.177 1.00 43.40 O
ATOM 2 P A A 557 -0.219 93.092 113.152 1.00 46.12 P
ATOM 3 OP1 A A 557 0.470 93.384 114.430 1.00 44.80 O
ATOM 4 OP2 A A 557 -0.079 91.746 112.526 1.00 43.27 O
ATOM 5 O5' A A 557 -1.777 93.366 113.317 1.00 47.21 O
ATOM 6 C5' A A 557 -2.339 93.671 114.594 1.00 47.02 C
ATOM 7 C4' A A 557 -2.167 95.131 114.876 1.00 47.61 C
ATOM 8 O4' A A 557 -2.623 95.882 113.725 1.00 46.53 O
ATOM 9 C3' A A 557 -2.994 95.640 116.034 1.00 50.31 C
ATOM 10 O3' A A 557 -2.355 95.414 117.283 1.00 55.53 O
ATOM 11 C2' A A 557 -3.229 97.097 115.657 1.00 47.89 C
ATOM 12 O2' A A 557 -2.141 97.953 115.914 1.00 45.98 O
ATOM 13 C1' A A 557 -3.422 96.970 114.145 1.00 46.25 C
ATOM 14 N9 A A 557 -4.804 96.667 113.777 1.00 45.81 N
ATOM 15 C8 A A 557 -5.275 95.566 113.100 1.00 46.08 C
ATOM 16 N7 A A 557 -6.576 95.557 112.947 1.00 45.72 N
ATOM 17 C5 A A 557 -6.989 96.734 113.552 1.00 44.77 C
ATOM 18 C6 A A 557 -8.250 97.310 113.723 1.00 44.40 C
ATOM 19 N6 A A 557 -9.377 96.756 113.279 1.00 43.84 N
ATOM 20 N1 A A 557 -8.316 98.495 114.373 1.00 44.23 N
ATOM 21 C2 A A 557 -7.177 99.052 114.813 1.00 43.09 C
ATOM 22 N3 A A 557 -5.933 98.608 114.709 1.00 43.32 N
ATOM 23 C4 A A 557 -5.908 97.431 114.061 1.00 44.90 C
ATOM 24 P C A 558 -3.252 95.096 118.572 1.00 59.45 P
ATOM 25 OP1 C A 558 -2.369 94.782 119.730 1.00 59.81 O
ATOM 26 OP2 C A 558 -4.301 94.126 118.160 1.00 58.13 O
ATOM 27 O5' C A 558 -3.883 96.516 118.892 1.00 58.72 O
TER
ATOM 1 O3' G B 576 -7.947 89.727 106.527 1.00 63.49 O
ATOM 2 P U B 577 -8.400 90.611 105.253 1.00 63.86 P
ATOM 3 OP1 U B 577 -9.098 89.735 104.273 1.00 63.28 O
ATOM 4 OP2 U B 577 -7.273 91.461 104.798 1.00 63.61 O
ATOM 5 O5' U B 577 -9.464 91.614 105.885 1.00 62.72 O
ATOM 6 C5' U B 577 -10.767 91.151 106.312 1.00 60.18 C
ATOM 7 C4' U B 577 -11.225 91.915 107.531 1.00 57.10 C
ATOM 8 O4' U B 577 -10.513 91.461 108.704 1.00 56.04 O
ATOM 9 C3' U B 577 -10.927 93.398 107.471 1.00 56.81 C
ATOM 10 O3' U B 577 -11.897 94.086 106.692 1.00 57.32 O
ATOM 11 C2' U B 577 -10.909 93.808 108.940 1.00 56.55 C
ATOM 12 O2' U B 577 -12.165 94.129 109.498 1.00 55.87 O
ATOM 13 C1' U B 577 -10.350 92.547 109.607 1.00 56.04 C
ATOM 14 N1 U B 577 -8.934 92.646 109.996 1.00 56.09 N
ATOM 15 C2 U B 577 -8.589 93.591 110.959 1.00 55.91 C
ATOM 16 O2 U B 577 -9.405 94.332 111.492 1.00 56.11 O
ATOM 17 N3 U B 577 -7.253 93.634 111.268 1.00 54.07 N
ATOM 18 C4 U B 577 -6.250 92.850 110.732 1.00 54.33 C
ATOM 19 O4 U B 577 -5.098 92.989 111.134 1.00 54.05 O
ATOM 20 C5 U B 577 -6.686 91.901 109.753 1.00 55.73 C
ATOM 21 C6 U B 577 -7.977 91.833 109.427 1.00 55.27 C
ATOM 22 P A B 578 -11.498 95.453 105.959 1.00 59.42 P
ATOM 23 OP1 A B 578 -12.685 95.982 105.250 1.00 59.36 O
ATOM 24 OP2 A B 578 -10.237 95.227 105.202 1.00 60.06 O
ATOM 25 O5' A B 578 -11.204 96.423 107.179 1.00 56.30 O
TER
ATOM 2 P A A 557 -0.219 93.092 113.152 1.00 46.12 P
ATOM 3 OP1 A A 557 0.470 93.384 114.430 1.00 44.80 O
ATOM 4 OP2 A A 557 -0.079 91.746 112.526 1.00 43.27 O
ATOM 5 O5' A A 557 -1.777 93.366 113.317 1.00 47.21 O
ATOM 6 C5' A A 557 -2.339 93.671 114.594 1.00 47.02 C
ATOM 7 C4' A A 557 -2.167 95.131 114.876 1.00 47.61 C
ATOM 8 O4' A A 557 -2.623 95.882 113.725 1.00 46.53 O
ATOM 9 C3' A A 557 -2.994 95.640 116.034 1.00 50.31 C
ATOM 10 O3' A A 557 -2.355 95.414 117.283 1.00 55.53 O
ATOM 11 C2' A A 557 -3.229 97.097 115.657 1.00 47.89 C
ATOM 12 O2' A A 557 -2.141 97.953 115.914 1.00 45.98 O
ATOM 13 C1' A A 557 -3.422 96.970 114.145 1.00 46.25 C
ATOM 14 N9 A A 557 -4.804 96.667 113.777 1.00 45.81 N
ATOM 15 C8 A A 557 -5.275 95.566 113.100 1.00 46.08 C
ATOM 16 N7 A A 557 -6.576 95.557 112.947 1.00 45.72 N
ATOM 17 C5 A A 557 -6.989 96.734 113.552 1.00 44.77 C
ATOM 18 C6 A A 557 -8.250 97.310 113.723 1.00 44.40 C
ATOM 19 N6 A A 557 -9.377 96.756 113.279 1.00 43.84 N
ATOM 20 N1 A A 557 -8.316 98.495 114.373 1.00 44.23 N
ATOM 21 C2 A A 557 -7.177 99.052 114.813 1.00 43.09 C
ATOM 22 N3 A A 557 -5.933 98.608 114.709 1.00 43.32 N
ATOM 23 C4 A A 557 -5.908 97.431 114.061 1.00 44.90 C
ATOM 24 P C A 558 -3.252 95.096 118.572 1.00 59.45 P
ATOM 25 OP1 C A 558 -2.369 94.782 119.730 1.00 59.81 O
ATOM 26 OP2 C A 558 -4.301 94.126 118.160 1.00 58.13 O
ATOM 27 O5' C A 558 -3.883 96.516 118.892 1.00 58.72 O
TER
ATOM 1 O3' G B 576 -7.947 89.727 106.527 1.00 63.49 O
ATOM 2 P U B 577 -8.400 90.611 105.253 1.00 63.86 P
ATOM 3 OP1 U B 577 -9.098 89.735 104.273 1.00 63.28 O
ATOM 4 OP2 U B 577 -7.273 91.461 104.798 1.00 63.61 O
ATOM 5 O5' U B 577 -9.464 91.614 105.885 1.00 62.72 O
ATOM 6 C5' U B 577 -10.767 91.151 106.312 1.00 60.18 C
ATOM 7 C4' U B 577 -11.225 91.915 107.531 1.00 57.10 C
ATOM 8 O4' U B 577 -10.513 91.461 108.704 1.00 56.04 O
ATOM 9 C3' U B 577 -10.927 93.398 107.471 1.00 56.81 C
ATOM 10 O3' U B 577 -11.897 94.086 106.692 1.00 57.32 O
ATOM 11 C2' U B 577 -10.909 93.808 108.940 1.00 56.55 C
ATOM 12 O2' U B 577 -12.165 94.129 109.498 1.00 55.87 O
ATOM 13 C1' U B 577 -10.350 92.547 109.607 1.00 56.04 C
ATOM 14 N1 U B 577 -8.934 92.646 109.996 1.00 56.09 N
ATOM 15 C2 U B 577 -8.589 93.591 110.959 1.00 55.91 C
ATOM 16 O2 U B 577 -9.405 94.332 111.492 1.00 56.11 O
ATOM 17 N3 U B 577 -7.253 93.634 111.268 1.00 54.07 N
ATOM 18 C4 U B 577 -6.250 92.850 110.732 1.00 54.33 C
ATOM 19 O4 U B 577 -5.098 92.989 111.134 1.00 54.05 O
ATOM 20 C5 U B 577 -6.686 91.901 109.753 1.00 55.73 C
ATOM 21 C6 U B 577 -7.977 91.833 109.427 1.00 55.27 C
ATOM 22 P A B 578 -11.498 95.453 105.959 1.00 59.42 P
ATOM 23 OP1 A B 578 -12.685 95.982 105.250 1.00 59.36 O
ATOM 24 OP2 A B 578 -10.237 95.227 105.202 1.00 60.06 O
ATOM 25 O5' A B 578 -11.204 96.423 107.179 1.00 56.30 O
TER
Atoms:
OP1: (0.470,93.384,114.430)
OP2: (-0.079,91.746,112.526)
C3': (-2.994,95.640,116.034)
C1': (-3.422,96.970,114.145)
C5': (-2.339,93.671,114.594)
O4': (-2.623,95.882,113.725)
C8: (-5.275,95.566,113.100)
O2': (-2.141,97.953,115.914)
C6: (-8.250,97.310,113.723)
C5: (-6.989,96.734,113.552)
C4: (-5.908,97.431,114.061)
P: (-0.219,93.092,113.152)
C4': (-2.167,95.131,114.876)
C2': (-3.229,97.097,115.657)
C2: (-7.177,99.052,114.813)
N1: (-8.316,98.495,114.373)
N3: (-5.933,98.608,114.709)
N6: (-9.377,96.756,113.279)
N7: (-6.576,95.557,112.947)
N9: (-4.804,96.667,113.777)
O5': (-1.777,93.366,113.317)
O3': (-2.355,95.414,117.283)
OP2: (-0.079,91.746,112.526)
C3': (-2.994,95.640,116.034)
C1': (-3.422,96.970,114.145)
C5': (-2.339,93.671,114.594)
O4': (-2.623,95.882,113.725)
C8: (-5.275,95.566,113.100)
O2': (-2.141,97.953,115.914)
C6: (-8.250,97.310,113.723)
C5: (-6.989,96.734,113.552)
C4: (-5.908,97.431,114.061)
P: (-0.219,93.092,113.152)
C4': (-2.167,95.131,114.876)
C2': (-3.229,97.097,115.657)
C2: (-7.177,99.052,114.813)
N1: (-8.316,98.495,114.373)
N3: (-5.933,98.608,114.709)
N6: (-9.377,96.756,113.279)
N7: (-6.576,95.557,112.947)
N9: (-4.804,96.667,113.777)
O5': (-1.777,93.366,113.317)
O3': (-2.355,95.414,117.283)
C4: (-6.250,92.850,110.732)
N3: (-7.253,93.634,111.268)
OP1: (-9.098,89.735,104.273)
OP2: (-7.273,91.461,104.798)
C2: (-8.589,93.591,110.959)
C1': (-10.350,92.547,109.607)
C3': (-10.927,93.398,107.471)
O5': (-9.464,91.614,105.885)
O4': (-10.513,91.461,108.704)
C5': (-10.767,91.151,106.312)
P: (-8.400,90.611,105.253)
C4': (-11.225,91.915,107.531)
C2': (-10.909,93.808,108.940)
O2': (-12.165,94.129,109.498)
N1: (-8.934,92.646,109.996)
O4: (-5.098,92.989,111.134)
O2: (-9.405,94.332,111.492)
C6: (-7.977,91.833,109.427)
C5: (-6.686,91.901,109.753)
O3': (-11.897,94.086,106.692)
N3: (-7.253,93.634,111.268)
OP1: (-9.098,89.735,104.273)
OP2: (-7.273,91.461,104.798)
C2: (-8.589,93.591,110.959)
C1': (-10.350,92.547,109.607)
C3': (-10.927,93.398,107.471)
O5': (-9.464,91.614,105.885)
O4': (-10.513,91.461,108.704)
C5': (-10.767,91.151,106.312)
P: (-8.400,90.611,105.253)
C4': (-11.225,91.915,107.531)
C2': (-10.909,93.808,108.940)
O2': (-12.165,94.129,109.498)
N1: (-8.934,92.646,109.996)
O4: (-5.098,92.989,111.134)
O2: (-9.405,94.332,111.492)
C6: (-7.977,91.833,109.427)
C5: (-6.686,91.901,109.753)
O3': (-11.897,94.086,106.692)
Image (generated by PyMOL):