Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:02104:02088
Extra
PDB:
ATOM 1 O3' G A2103 120.992 110.758 40.399 1.00 65.74 O
ATOM 2 P A A2104 121.879 109.453 40.103 1.00 66.12 P
ATOM 3 OP1 A A2104 121.497 108.408 41.097 1.00 64.88 O
ATOM 4 OP2 A A2104 123.302 109.874 39.986 1.00 66.81 O
ATOM 5 O5' A A2104 121.391 108.987 38.660 1.00 65.55 O
ATOM 6 C5' A A2104 120.480 107.886 38.506 1.00 64.86 C
ATOM 7 C4' A A2104 119.055 108.385 38.539 1.00 64.53 C
ATOM 8 O4' A A2104 118.923 109.524 37.647 1.00 64.80 O
ATOM 9 C3' A A2104 118.004 107.379 38.085 1.00 64.22 C
ATOM 10 O3' A A2104 116.772 107.714 38.725 1.00 65.39 O
ATOM 11 C2' A A2104 117.895 107.706 36.601 1.00 62.85 C
ATOM 12 O2' A A2104 116.692 107.277 36.011 1.00 63.30 O
ATOM 13 C1' A A2104 117.970 109.231 36.646 1.00 63.13 C
ATOM 14 N9 A A2104 118.399 109.856 35.398 1.00 61.41 N
ATOM 15 C8 A A2104 119.665 110.235 35.034 1.00 60.32 C
ATOM 16 N7 A A2104 119.735 110.752 33.834 1.00 61.06 N
ATOM 17 C5 A A2104 118.426 110.719 33.379 1.00 60.38 C
ATOM 18 C6 A A2104 117.840 111.116 32.173 1.00 60.23 C
ATOM 19 N6 A A2104 118.527 111.631 31.152 1.00 62.01 N
ATOM 20 N1 A A2104 116.507 110.956 32.040 1.00 60.21 N
ATOM 21 C2 A A2104 115.823 110.418 33.056 1.00 60.07 C
ATOM 22 N3 A A2104 116.263 109.997 34.236 1.00 59.94 N
ATOM 23 C4 A A2104 117.591 110.178 34.335 1.00 61.06 C
ATOM 24 P C A2105 115.991 106.628 39.620 1.00 64.97 P
ATOM 25 OP1 C A2105 116.751 105.340 39.621 1.00 63.61 O
ATOM 26 OP2 C A2105 114.577 106.643 39.161 1.00 61.72 O
ATOM 27 O5' C A2105 116.037 107.274 41.080 1.00 62.71 O
TER
ATOM 1 O3' C B2087 129.539 112.230 31.862 1.00 85.39 O
ATOM 2 P U B2088 128.897 113.709 31.945 1.00 82.26 P
ATOM 3 OP1 U B2088 129.751 114.653 31.181 1.00 81.44 O
ATOM 4 OP2 U B2088 128.590 113.991 33.375 1.00 81.72 O
ATOM 5 O5' U B2088 127.523 113.580 31.154 1.00 79.89 O
ATOM 6 C5' U B2088 127.502 113.178 29.777 1.00 76.02 C
ATOM 7 C4' U B2088 126.089 113.203 29.248 1.00 73.77 C
ATOM 8 O4' U B2088 125.277 112.285 30.033 1.00 73.78 O
ATOM 9 C3' U B2088 125.373 114.551 29.297 1.00 72.57 C
ATOM 10 O3' U B2088 124.487 114.605 28.189 1.00 70.88 O
ATOM 11 C2' U B2088 124.586 114.460 30.602 1.00 73.06 C
ATOM 12 O2' U B2088 123.433 115.278 30.633 1.00 73.41 O
ATOM 13 C1' U B2088 124.190 112.986 30.610 1.00 73.56 C
ATOM 14 N1 U B2088 123.923 112.434 31.948 1.00 73.17 N
ATOM 15 C2 U B2088 122.631 112.000 32.227 1.00 72.86 C
ATOM 16 O2 U B2088 121.712 112.063 31.421 1.00 71.32 O
ATOM 17 N3 U B2088 122.455 111.486 33.490 1.00 72.41 N
ATOM 18 C4 U B2088 123.408 111.362 34.480 1.00 73.67 C
ATOM 19 O4 U B2088 123.092 110.870 35.566 1.00 74.76 O
ATOM 20 C5 U B2088 124.712 111.838 34.121 1.00 73.35 C
ATOM 21 C6 U B2088 124.920 112.345 32.902 1.00 73.23 C
ATOM 22 P C B2089 123.967 116.021 27.631 1.00 70.74 P
ATOM 23 OP1 C B2089 124.764 116.370 26.426 1.00 73.02 O
ATOM 24 OP2 C B2089 123.872 116.992 28.754 1.00 69.53 O
ATOM 25 O5' C B2089 122.506 115.641 27.127 1.00 70.59 O
TER
ATOM 2 P A A2104 121.879 109.453 40.103 1.00 66.12 P
ATOM 3 OP1 A A2104 121.497 108.408 41.097 1.00 64.88 O
ATOM 4 OP2 A A2104 123.302 109.874 39.986 1.00 66.81 O
ATOM 5 O5' A A2104 121.391 108.987 38.660 1.00 65.55 O
ATOM 6 C5' A A2104 120.480 107.886 38.506 1.00 64.86 C
ATOM 7 C4' A A2104 119.055 108.385 38.539 1.00 64.53 C
ATOM 8 O4' A A2104 118.923 109.524 37.647 1.00 64.80 O
ATOM 9 C3' A A2104 118.004 107.379 38.085 1.00 64.22 C
ATOM 10 O3' A A2104 116.772 107.714 38.725 1.00 65.39 O
ATOM 11 C2' A A2104 117.895 107.706 36.601 1.00 62.85 C
ATOM 12 O2' A A2104 116.692 107.277 36.011 1.00 63.30 O
ATOM 13 C1' A A2104 117.970 109.231 36.646 1.00 63.13 C
ATOM 14 N9 A A2104 118.399 109.856 35.398 1.00 61.41 N
ATOM 15 C8 A A2104 119.665 110.235 35.034 1.00 60.32 C
ATOM 16 N7 A A2104 119.735 110.752 33.834 1.00 61.06 N
ATOM 17 C5 A A2104 118.426 110.719 33.379 1.00 60.38 C
ATOM 18 C6 A A2104 117.840 111.116 32.173 1.00 60.23 C
ATOM 19 N6 A A2104 118.527 111.631 31.152 1.00 62.01 N
ATOM 20 N1 A A2104 116.507 110.956 32.040 1.00 60.21 N
ATOM 21 C2 A A2104 115.823 110.418 33.056 1.00 60.07 C
ATOM 22 N3 A A2104 116.263 109.997 34.236 1.00 59.94 N
ATOM 23 C4 A A2104 117.591 110.178 34.335 1.00 61.06 C
ATOM 24 P C A2105 115.991 106.628 39.620 1.00 64.97 P
ATOM 25 OP1 C A2105 116.751 105.340 39.621 1.00 63.61 O
ATOM 26 OP2 C A2105 114.577 106.643 39.161 1.00 61.72 O
ATOM 27 O5' C A2105 116.037 107.274 41.080 1.00 62.71 O
TER
ATOM 1 O3' C B2087 129.539 112.230 31.862 1.00 85.39 O
ATOM 2 P U B2088 128.897 113.709 31.945 1.00 82.26 P
ATOM 3 OP1 U B2088 129.751 114.653 31.181 1.00 81.44 O
ATOM 4 OP2 U B2088 128.590 113.991 33.375 1.00 81.72 O
ATOM 5 O5' U B2088 127.523 113.580 31.154 1.00 79.89 O
ATOM 6 C5' U B2088 127.502 113.178 29.777 1.00 76.02 C
ATOM 7 C4' U B2088 126.089 113.203 29.248 1.00 73.77 C
ATOM 8 O4' U B2088 125.277 112.285 30.033 1.00 73.78 O
ATOM 9 C3' U B2088 125.373 114.551 29.297 1.00 72.57 C
ATOM 10 O3' U B2088 124.487 114.605 28.189 1.00 70.88 O
ATOM 11 C2' U B2088 124.586 114.460 30.602 1.00 73.06 C
ATOM 12 O2' U B2088 123.433 115.278 30.633 1.00 73.41 O
ATOM 13 C1' U B2088 124.190 112.986 30.610 1.00 73.56 C
ATOM 14 N1 U B2088 123.923 112.434 31.948 1.00 73.17 N
ATOM 15 C2 U B2088 122.631 112.000 32.227 1.00 72.86 C
ATOM 16 O2 U B2088 121.712 112.063 31.421 1.00 71.32 O
ATOM 17 N3 U B2088 122.455 111.486 33.490 1.00 72.41 N
ATOM 18 C4 U B2088 123.408 111.362 34.480 1.00 73.67 C
ATOM 19 O4 U B2088 123.092 110.870 35.566 1.00 74.76 O
ATOM 20 C5 U B2088 124.712 111.838 34.121 1.00 73.35 C
ATOM 21 C6 U B2088 124.920 112.345 32.902 1.00 73.23 C
ATOM 22 P C B2089 123.967 116.021 27.631 1.00 70.74 P
ATOM 23 OP1 C B2089 124.764 116.370 26.426 1.00 73.02 O
ATOM 24 OP2 C B2089 123.872 116.992 28.754 1.00 69.53 O
ATOM 25 O5' C B2089 122.506 115.641 27.127 1.00 70.59 O
TER
Atoms:
OP1: (121.497,108.408,41.097)
OP2: (123.302,109.874,39.986)
C3': (118.004,107.379,38.085)
C1': (117.970,109.231,36.646)
C5': (120.480,107.886,38.506)
O4': (118.923,109.524,37.647)
C8: (119.665,110.235,35.034)
O2': (116.692,107.277,36.011)
C6: (117.840,111.116,32.173)
C5: (118.426,110.719,33.379)
C4: (117.591,110.178,34.335)
P: (121.879,109.453,40.103)
C4': (119.055,108.385,38.539)
C2': (117.895,107.706,36.601)
C2: (115.823,110.418,33.056)
N1: (116.507,110.956,32.040)
N3: (116.263,109.997,34.236)
N6: (118.527,111.631,31.152)
N7: (119.735,110.752,33.834)
N9: (118.399,109.856,35.398)
O5': (121.391,108.987,38.660)
O3': (116.772,107.714,38.725)
OP2: (123.302,109.874,39.986)
C3': (118.004,107.379,38.085)
C1': (117.970,109.231,36.646)
C5': (120.480,107.886,38.506)
O4': (118.923,109.524,37.647)
C8: (119.665,110.235,35.034)
O2': (116.692,107.277,36.011)
C6: (117.840,111.116,32.173)
C5: (118.426,110.719,33.379)
C4: (117.591,110.178,34.335)
P: (121.879,109.453,40.103)
C4': (119.055,108.385,38.539)
C2': (117.895,107.706,36.601)
C2: (115.823,110.418,33.056)
N1: (116.507,110.956,32.040)
N3: (116.263,109.997,34.236)
N6: (118.527,111.631,31.152)
N7: (119.735,110.752,33.834)
N9: (118.399,109.856,35.398)
O5': (121.391,108.987,38.660)
O3': (116.772,107.714,38.725)
C4: (123.408,111.362,34.480)
N3: (122.455,111.486,33.490)
OP1: (129.751,114.653,31.181)
OP2: (128.590,113.991,33.375)
C2: (122.631,112.000,32.227)
C1': (124.190,112.986,30.610)
C3': (125.373,114.551,29.297)
O5': (127.523,113.580,31.154)
O4': (125.277,112.285,30.033)
C5': (127.502,113.178,29.777)
P: (128.897,113.709,31.945)
C4': (126.089,113.203,29.248)
C2': (124.586,114.460,30.602)
O2': (123.433,115.278,30.633)
N1: (123.923,112.434,31.948)
O4: (123.092,110.870,35.566)
O2: (121.712,112.063,31.421)
C6: (124.920,112.345,32.902)
C5: (124.712,111.838,34.121)
O3': (124.487,114.605,28.189)
N3: (122.455,111.486,33.490)
OP1: (129.751,114.653,31.181)
OP2: (128.590,113.991,33.375)
C2: (122.631,112.000,32.227)
C1': (124.190,112.986,30.610)
C3': (125.373,114.551,29.297)
O5': (127.523,113.580,31.154)
O4': (125.277,112.285,30.033)
C5': (127.502,113.178,29.777)
P: (128.897,113.709,31.945)
C4': (126.089,113.203,29.248)
C2': (124.586,114.460,30.602)
O2': (123.433,115.278,30.633)
N1: (123.923,112.434,31.948)
O4: (123.092,110.870,35.566)
O2: (121.712,112.063,31.421)
C6: (124.920,112.345,32.902)
C5: (124.712,111.838,34.121)
O3': (124.487,114.605,28.189)
Image (generated by PyMOL):