Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02406:02407
Extra
PDB:
ATOM 1 O3' G A2405 76.268 110.889 157.699 1.00 65.84 O
ATOM 2 P C A2406 75.356 111.963 156.935 1.00 67.75 P
ATOM 3 OP1 C A2406 74.970 111.367 155.632 1.00 68.84 O
ATOM 4 OP2 C A2406 76.089 113.255 156.967 1.00 66.26 O
ATOM 5 O5' C A2406 74.053 112.110 157.844 1.00 67.74 O
ATOM 6 C5' C A2406 74.156 112.498 159.233 1.00 66.55 C
ATOM 7 C4' C A2406 73.384 113.773 159.478 1.00 64.49 C
ATOM 8 O4' C A2406 71.985 113.561 159.159 1.00 63.35 O
ATOM 9 C3' C A2406 73.354 114.278 160.914 1.00 63.69 C
ATOM 10 O3' C A2406 74.532 115.020 161.228 1.00 63.03 O
ATOM 11 C2' C A2406 72.126 115.178 160.897 1.00 62.66 C
ATOM 12 O2' C A2406 72.382 116.413 160.259 1.00 62.98 O
ATOM 13 C1' C A2406 71.183 114.377 159.999 1.00 61.82 C
ATOM 14 N1 C A2406 70.227 113.526 160.730 1.00 59.77 N
ATOM 15 C2 C A2406 69.066 114.115 161.252 1.00 59.16 C
ATOM 16 O2 C A2406 68.892 115.339 161.109 1.00 58.98 O
ATOM 17 N3 C A2406 68.166 113.339 161.898 1.00 58.22 N
ATOM 18 C4 C A2406 68.390 112.032 162.038 1.00 58.98 C
ATOM 19 N4 C A2406 67.471 111.307 162.676 1.00 59.46 N
ATOM 20 C5 C A2406 69.567 111.410 161.529 1.00 59.71 C
ATOM 21 C6 C A2406 70.451 112.186 160.891 1.00 60.15 C
ATOM 22 P A A2407 75.519 114.517 162.398 1.00 61.51 P
ATOM 23 OP1 A A2407 76.895 114.846 161.940 1.00 60.59 O
ATOM 24 OP2 A A2407 75.190 113.120 162.798 1.00 59.85 O
ATOM 25 O5' A A2407 75.202 115.486 163.620 1.00 61.61 O
TER
ATOM 1 O3' C B2406 74.532 115.020 161.228 1.00 63.03 O
ATOM 2 P A B2407 75.519 114.517 162.398 1.00 61.51 P
ATOM 3 OP1 A B2407 76.895 114.846 161.940 1.00 60.59 O
ATOM 4 OP2 A B2407 75.190 113.120 162.798 1.00 59.85 O
ATOM 5 O5' A B2407 75.202 115.486 163.620 1.00 61.61 O
ATOM 6 C5' A B2407 74.023 115.323 164.425 1.00 60.61 C
ATOM 7 C4' A B2407 73.930 116.458 165.412 1.00 60.74 C
ATOM 8 O4' A B2407 75.131 116.454 166.229 1.00 59.28 O
ATOM 9 C3' A B2407 73.921 117.844 164.784 1.00 60.73 C
ATOM 10 O3' A B2407 72.614 118.229 164.358 1.00 62.48 O
ATOM 11 C2' A B2407 74.472 118.713 165.907 1.00 59.40 C
ATOM 12 O2' A B2407 73.518 118.999 166.911 1.00 59.17 O
ATOM 13 C1' A B2407 75.539 117.789 166.495 1.00 58.20 C
ATOM 14 N9 A B2407 76.877 117.986 165.928 1.00 57.16 N
ATOM 15 C8 A B2407 77.646 117.085 165.224 1.00 56.12 C
ATOM 16 N7 A B2407 78.818 117.554 164.870 1.00 55.00 N
ATOM 17 C5 A B2407 78.825 118.849 165.369 1.00 53.80 C
ATOM 18 C6 A B2407 79.786 119.873 165.332 1.00 53.46 C
ATOM 19 N6 A B2407 80.993 119.744 164.774 1.00 52.84 N
ATOM 20 N1 A B2407 79.468 121.051 165.905 1.00 53.89 N
ATOM 21 C2 A B2407 78.272 121.177 166.489 1.00 53.93 C
ATOM 22 N3 A B2407 77.292 120.287 166.605 1.00 53.93 N
ATOM 23 C4 A B2407 77.634 119.131 166.015 1.00 54.90 C
ATOM 24 P G B2408 72.429 119.035 162.977 1.00 62.06 P
ATOM 25 OP1 G B2408 70.982 119.347 162.811 1.00 61.22 O
ATOM 26 OP2 G B2408 73.145 118.280 161.918 1.00 62.65 O
ATOM 27 O5' G B2408 73.221 120.398 163.212 1.00 61.63 O
TER
ATOM 2 P C A2406 75.356 111.963 156.935 1.00 67.75 P
ATOM 3 OP1 C A2406 74.970 111.367 155.632 1.00 68.84 O
ATOM 4 OP2 C A2406 76.089 113.255 156.967 1.00 66.26 O
ATOM 5 O5' C A2406 74.053 112.110 157.844 1.00 67.74 O
ATOM 6 C5' C A2406 74.156 112.498 159.233 1.00 66.55 C
ATOM 7 C4' C A2406 73.384 113.773 159.478 1.00 64.49 C
ATOM 8 O4' C A2406 71.985 113.561 159.159 1.00 63.35 O
ATOM 9 C3' C A2406 73.354 114.278 160.914 1.00 63.69 C
ATOM 10 O3' C A2406 74.532 115.020 161.228 1.00 63.03 O
ATOM 11 C2' C A2406 72.126 115.178 160.897 1.00 62.66 C
ATOM 12 O2' C A2406 72.382 116.413 160.259 1.00 62.98 O
ATOM 13 C1' C A2406 71.183 114.377 159.999 1.00 61.82 C
ATOM 14 N1 C A2406 70.227 113.526 160.730 1.00 59.77 N
ATOM 15 C2 C A2406 69.066 114.115 161.252 1.00 59.16 C
ATOM 16 O2 C A2406 68.892 115.339 161.109 1.00 58.98 O
ATOM 17 N3 C A2406 68.166 113.339 161.898 1.00 58.22 N
ATOM 18 C4 C A2406 68.390 112.032 162.038 1.00 58.98 C
ATOM 19 N4 C A2406 67.471 111.307 162.676 1.00 59.46 N
ATOM 20 C5 C A2406 69.567 111.410 161.529 1.00 59.71 C
ATOM 21 C6 C A2406 70.451 112.186 160.891 1.00 60.15 C
ATOM 22 P A A2407 75.519 114.517 162.398 1.00 61.51 P
ATOM 23 OP1 A A2407 76.895 114.846 161.940 1.00 60.59 O
ATOM 24 OP2 A A2407 75.190 113.120 162.798 1.00 59.85 O
ATOM 25 O5' A A2407 75.202 115.486 163.620 1.00 61.61 O
TER
ATOM 1 O3' C B2406 74.532 115.020 161.228 1.00 63.03 O
ATOM 2 P A B2407 75.519 114.517 162.398 1.00 61.51 P
ATOM 3 OP1 A B2407 76.895 114.846 161.940 1.00 60.59 O
ATOM 4 OP2 A B2407 75.190 113.120 162.798 1.00 59.85 O
ATOM 5 O5' A B2407 75.202 115.486 163.620 1.00 61.61 O
ATOM 6 C5' A B2407 74.023 115.323 164.425 1.00 60.61 C
ATOM 7 C4' A B2407 73.930 116.458 165.412 1.00 60.74 C
ATOM 8 O4' A B2407 75.131 116.454 166.229 1.00 59.28 O
ATOM 9 C3' A B2407 73.921 117.844 164.784 1.00 60.73 C
ATOM 10 O3' A B2407 72.614 118.229 164.358 1.00 62.48 O
ATOM 11 C2' A B2407 74.472 118.713 165.907 1.00 59.40 C
ATOM 12 O2' A B2407 73.518 118.999 166.911 1.00 59.17 O
ATOM 13 C1' A B2407 75.539 117.789 166.495 1.00 58.20 C
ATOM 14 N9 A B2407 76.877 117.986 165.928 1.00 57.16 N
ATOM 15 C8 A B2407 77.646 117.085 165.224 1.00 56.12 C
ATOM 16 N7 A B2407 78.818 117.554 164.870 1.00 55.00 N
ATOM 17 C5 A B2407 78.825 118.849 165.369 1.00 53.80 C
ATOM 18 C6 A B2407 79.786 119.873 165.332 1.00 53.46 C
ATOM 19 N6 A B2407 80.993 119.744 164.774 1.00 52.84 N
ATOM 20 N1 A B2407 79.468 121.051 165.905 1.00 53.89 N
ATOM 21 C2 A B2407 78.272 121.177 166.489 1.00 53.93 C
ATOM 22 N3 A B2407 77.292 120.287 166.605 1.00 53.93 N
ATOM 23 C4 A B2407 77.634 119.131 166.015 1.00 54.90 C
ATOM 24 P G B2408 72.429 119.035 162.977 1.00 62.06 P
ATOM 25 OP1 G B2408 70.982 119.347 162.811 1.00 61.22 O
ATOM 26 OP2 G B2408 73.145 118.280 161.918 1.00 62.65 O
ATOM 27 O5' G B2408 73.221 120.398 163.212 1.00 61.63 O
TER
Atoms:
C2: (69.066,114.115,161.252)
OP1: (74.970,111.367,155.632)
OP2: (76.089,113.255,156.967)
C4: (68.390,112.032,162.038)
O5': (74.053,112.110,157.844)
C3': (73.354,114.278,160.914)
C1': (71.183,114.377,159.999)
O4': (71.985,113.561,159.159)
C5': (74.156,112.498,159.233)
P: (75.356,111.963,156.935)
O2: (68.892,115.339,161.109)
C4': (73.384,113.773,159.478)
C2': (72.126,115.178,160.897)
O2': (72.382,116.413,160.259)
N1: (70.227,113.526,160.730)
N3: (68.166,113.339,161.898)
N4: (67.471,111.307,162.676)
C6: (70.451,112.186,160.891)
C5: (69.567,111.410,161.529)
O3': (74.532,115.020,161.228)
OP1: (74.970,111.367,155.632)
OP2: (76.089,113.255,156.967)
C4: (68.390,112.032,162.038)
O5': (74.053,112.110,157.844)
C3': (73.354,114.278,160.914)
C1': (71.183,114.377,159.999)
O4': (71.985,113.561,159.159)
C5': (74.156,112.498,159.233)
P: (75.356,111.963,156.935)
O2: (68.892,115.339,161.109)
C4': (73.384,113.773,159.478)
C2': (72.126,115.178,160.897)
O2': (72.382,116.413,160.259)
N1: (70.227,113.526,160.730)
N3: (68.166,113.339,161.898)
N4: (67.471,111.307,162.676)
C6: (70.451,112.186,160.891)
C5: (69.567,111.410,161.529)
O3': (74.532,115.020,161.228)
OP1: (76.895,114.846,161.940)
OP2: (75.190,113.120,162.798)
C3': (73.921,117.844,164.784)
C1': (75.539,117.789,166.495)
C5': (74.023,115.323,164.425)
O4': (75.131,116.454,166.229)
C8: (77.646,117.085,165.224)
O2': (73.518,118.999,166.911)
C6: (79.786,119.873,165.332)
C5: (78.825,118.849,165.369)
C4: (77.634,119.131,166.015)
P: (75.519,114.517,162.398)
C4': (73.930,116.458,165.412)
C2': (74.472,118.713,165.907)
C2: (78.272,121.177,166.489)
N1: (79.468,121.051,165.905)
N3: (77.292,120.287,166.605)
N6: (80.993,119.744,164.774)
N7: (78.818,117.554,164.870)
N9: (76.877,117.986,165.928)
O5': (75.202,115.486,163.620)
O3': (72.614,118.229,164.358)
OP2: (75.190,113.120,162.798)
C3': (73.921,117.844,164.784)
C1': (75.539,117.789,166.495)
C5': (74.023,115.323,164.425)
O4': (75.131,116.454,166.229)
C8: (77.646,117.085,165.224)
O2': (73.518,118.999,166.911)
C6: (79.786,119.873,165.332)
C5: (78.825,118.849,165.369)
C4: (77.634,119.131,166.015)
P: (75.519,114.517,162.398)
C4': (73.930,116.458,165.412)
C2': (74.472,118.713,165.907)
C2: (78.272,121.177,166.489)
N1: (79.468,121.051,165.905)
N3: (77.292,120.287,166.605)
N6: (80.993,119.744,164.774)
N7: (78.818,117.554,164.870)
N9: (76.877,117.986,165.928)
O5': (75.202,115.486,163.620)
O3': (72.614,118.229,164.358)
Image (generated by PyMOL):