Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02678:02679
Extra
PDB:
ATOM 1 O3' A A2677 46.720 161.400 122.228 1.00 44.76 O
ATOM 2 P C A2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 3 OP1 C A2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 4 OP2 C A2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 5 O5' C A2678 47.692 161.064 119.938 1.00 42.78 O
ATOM 6 C5' C A2678 46.657 160.285 119.347 1.00 43.09 C
ATOM 7 C4' C A2678 46.398 160.777 117.959 1.00 46.35 C
ATOM 8 O4' C A2678 46.059 162.189 118.028 1.00 46.50 O
ATOM 9 C3' C A2678 47.602 160.750 117.035 1.00 46.39 C
ATOM 10 O3' C A2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 11 C2' C A2678 47.218 161.788 115.993 1.00 46.85 C
ATOM 12 O2' C A2678 46.284 161.292 115.061 1.00 47.76 O
ATOM 13 C1' C A2678 46.534 162.845 116.864 1.00 47.04 C
ATOM 14 N1 C A2678 47.456 163.916 117.264 1.00 47.89 N
ATOM 15 C2 C A2678 47.720 164.952 116.359 1.00 49.75 C
ATOM 16 O2 C A2678 47.152 164.951 115.253 1.00 52.22 O
ATOM 17 N3 C A2678 48.586 165.926 116.707 1.00 50.56 N
ATOM 18 C4 C A2678 49.176 165.897 117.901 1.00 49.73 C
ATOM 19 N4 C A2678 50.029 166.878 118.197 1.00 52.33 N
ATOM 20 C5 C A2678 48.918 164.864 118.845 1.00 49.38 C
ATOM 21 C6 C A2678 48.059 163.903 118.490 1.00 48.60 C
ATOM 22 P A A2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 23 OP1 A A2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 24 OP2 A A2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 25 O5' A A2679 48.833 159.642 114.163 1.00 47.18 O
TER
ATOM 1 O3' C B2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 2 P A B2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 3 OP1 A B2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 4 OP2 A B2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 5 O5' A B2679 48.833 159.642 114.163 1.00 47.18 O
ATOM 6 C5' A B2679 49.518 160.761 113.575 1.00 43.17 C
ATOM 7 C4' A B2679 49.476 160.685 112.061 1.00 41.91 C
ATOM 8 O4' A B2679 50.058 159.429 111.621 1.00 42.43 O
ATOM 9 C3' A B2679 48.118 160.688 111.386 1.00 41.80 C
ATOM 10 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 11 C2' A B2679 48.464 160.115 110.026 1.00 41.34 C
ATOM 12 O2' A B2679 49.115 161.046 109.187 1.00 44.62 O
ATOM 13 C1' A B2679 49.429 159.001 110.426 1.00 39.59 C
ATOM 14 N9 A B2679 48.663 157.795 110.725 1.00 37.05 N
ATOM 15 C8 A B2679 48.601 157.085 111.892 1.00 36.87 C
ATOM 16 N7 A B2679 47.737 156.103 111.866 1.00 36.73 N
ATOM 17 C5 A B2679 47.211 156.158 110.588 1.00 37.22 C
ATOM 18 C6 A B2679 46.235 155.396 109.938 1.00 39.18 C
ATOM 19 N6 A B2679 45.565 154.398 110.521 1.00 40.27 N
ATOM 20 N1 A B2679 45.956 155.702 108.650 1.00 40.29 N
ATOM 21 C2 A B2679 46.614 156.717 108.072 1.00 38.91 C
ATOM 22 N3 A B2679 47.538 157.512 108.586 1.00 37.64 N
ATOM 23 C4 A B2679 47.792 157.177 109.864 1.00 37.50 C
ATOM 24 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 25 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 26 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 27 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
TER
ATOM 2 P C A2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 3 OP1 C A2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 4 OP2 C A2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 5 O5' C A2678 47.692 161.064 119.938 1.00 42.78 O
ATOM 6 C5' C A2678 46.657 160.285 119.347 1.00 43.09 C
ATOM 7 C4' C A2678 46.398 160.777 117.959 1.00 46.35 C
ATOM 8 O4' C A2678 46.059 162.189 118.028 1.00 46.50 O
ATOM 9 C3' C A2678 47.602 160.750 117.035 1.00 46.39 C
ATOM 10 O3' C A2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 11 C2' C A2678 47.218 161.788 115.993 1.00 46.85 C
ATOM 12 O2' C A2678 46.284 161.292 115.061 1.00 47.76 O
ATOM 13 C1' C A2678 46.534 162.845 116.864 1.00 47.04 C
ATOM 14 N1 C A2678 47.456 163.916 117.264 1.00 47.89 N
ATOM 15 C2 C A2678 47.720 164.952 116.359 1.00 49.75 C
ATOM 16 O2 C A2678 47.152 164.951 115.253 1.00 52.22 O
ATOM 17 N3 C A2678 48.586 165.926 116.707 1.00 50.56 N
ATOM 18 C4 C A2678 49.176 165.897 117.901 1.00 49.73 C
ATOM 19 N4 C A2678 50.029 166.878 118.197 1.00 52.33 N
ATOM 20 C5 C A2678 48.918 164.864 118.845 1.00 49.38 C
ATOM 21 C6 C A2678 48.059 163.903 118.490 1.00 48.60 C
ATOM 22 P A A2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 23 OP1 A A2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 24 OP2 A A2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 25 O5' A A2679 48.833 159.642 114.163 1.00 47.18 O
TER
ATOM 1 O3' C B2678 47.807 159.464 116.469 1.00 46.30 O
ATOM 2 P A B2679 49.158 159.162 115.652 1.00 50.09 P
ATOM 3 OP1 A B2679 49.363 157.694 115.607 1.00 50.49 O
ATOM 4 OP2 A B2679 50.219 160.028 116.221 1.00 49.56 O
ATOM 5 O5' A B2679 48.833 159.642 114.163 1.00 47.18 O
ATOM 6 C5' A B2679 49.518 160.761 113.575 1.00 43.17 C
ATOM 7 C4' A B2679 49.476 160.685 112.061 1.00 41.91 C
ATOM 8 O4' A B2679 50.058 159.429 111.621 1.00 42.43 O
ATOM 9 C3' A B2679 48.118 160.688 111.386 1.00 41.80 C
ATOM 10 O3' A B2679 47.551 161.980 111.264 1.00 43.73 O
ATOM 11 C2' A B2679 48.464 160.115 110.026 1.00 41.34 C
ATOM 12 O2' A B2679 49.115 161.046 109.187 1.00 44.62 O
ATOM 13 C1' A B2679 49.429 159.001 110.426 1.00 39.59 C
ATOM 14 N9 A B2679 48.663 157.795 110.725 1.00 37.05 N
ATOM 15 C8 A B2679 48.601 157.085 111.892 1.00 36.87 C
ATOM 16 N7 A B2679 47.737 156.103 111.866 1.00 36.73 N
ATOM 17 C5 A B2679 47.211 156.158 110.588 1.00 37.22 C
ATOM 18 C6 A B2679 46.235 155.396 109.938 1.00 39.18 C
ATOM 19 N6 A B2679 45.565 154.398 110.521 1.00 40.27 N
ATOM 20 N1 A B2679 45.956 155.702 108.650 1.00 40.29 N
ATOM 21 C2 A B2679 46.614 156.717 108.072 1.00 38.91 C
ATOM 22 N3 A B2679 47.538 157.512 108.586 1.00 37.64 N
ATOM 23 C4 A B2679 47.792 157.177 109.864 1.00 37.50 C
ATOM 24 P A B2680 45.976 162.183 111.526 1.00 45.55 P
ATOM 25 OP1 A B2680 45.730 163.650 111.530 1.00 45.41 O
ATOM 26 OP2 A B2680 45.598 161.379 112.714 1.00 43.45 O
ATOM 27 O5' A B2680 45.265 161.512 110.261 1.00 45.47 O
TER
Atoms:
C2: (47.720,164.952,116.359)
OP1: (48.224,159.463,121.782)
OP2: (49.133,161.857,121.770)
C4: (49.176,165.897,117.901)
O5': (47.692,161.064,119.938)
C3': (47.602,160.750,117.035)
C1': (46.534,162.845,116.864)
O4': (46.059,162.189,118.028)
C5': (46.657,160.285,119.347)
P: (48.045,160.902,121.476)
O2: (47.152,164.951,115.253)
C4': (46.398,160.777,117.959)
C2': (47.218,161.788,115.993)
O2': (46.284,161.292,115.061)
N1: (47.456,163.916,117.264)
N3: (48.586,165.926,116.707)
N4: (50.029,166.878,118.197)
C6: (48.059,163.903,118.490)
C5: (48.918,164.864,118.845)
O3': (47.807,159.464,116.469)
OP1: (48.224,159.463,121.782)
OP2: (49.133,161.857,121.770)
C4: (49.176,165.897,117.901)
O5': (47.692,161.064,119.938)
C3': (47.602,160.750,117.035)
C1': (46.534,162.845,116.864)
O4': (46.059,162.189,118.028)
C5': (46.657,160.285,119.347)
P: (48.045,160.902,121.476)
O2: (47.152,164.951,115.253)
C4': (46.398,160.777,117.959)
C2': (47.218,161.788,115.993)
O2': (46.284,161.292,115.061)
N1: (47.456,163.916,117.264)
N3: (48.586,165.926,116.707)
N4: (50.029,166.878,118.197)
C6: (48.059,163.903,118.490)
C5: (48.918,164.864,118.845)
O3': (47.807,159.464,116.469)
OP1: (49.363,157.694,115.607)
OP2: (50.219,160.028,116.221)
C3': (48.118,160.688,111.386)
C1': (49.429,159.001,110.426)
C5': (49.518,160.761,113.575)
O4': (50.058,159.429,111.621)
C8: (48.601,157.085,111.892)
O2': (49.115,161.046,109.187)
C6: (46.235,155.396,109.938)
C5: (47.211,156.158,110.588)
C4: (47.792,157.177,109.864)
P: (49.158,159.162,115.652)
C4': (49.476,160.685,112.061)
C2': (48.464,160.115,110.026)
C2: (46.614,156.717,108.072)
N1: (45.956,155.702,108.650)
N3: (47.538,157.512,108.586)
N6: (45.565,154.398,110.521)
N7: (47.737,156.103,111.866)
N9: (48.663,157.795,110.725)
O5': (48.833,159.642,114.163)
O3': (47.551,161.980,111.264)
OP2: (50.219,160.028,116.221)
C3': (48.118,160.688,111.386)
C1': (49.429,159.001,110.426)
C5': (49.518,160.761,113.575)
O4': (50.058,159.429,111.621)
C8: (48.601,157.085,111.892)
O2': (49.115,161.046,109.187)
C6: (46.235,155.396,109.938)
C5: (47.211,156.158,110.588)
C4: (47.792,157.177,109.864)
P: (49.158,159.162,115.652)
C4': (49.476,160.685,112.061)
C2': (48.464,160.115,110.026)
C2: (46.614,156.717,108.072)
N1: (45.956,155.702,108.650)
N3: (47.538,157.512,108.586)
N6: (45.565,154.398,110.521)
N7: (47.737,156.103,111.866)
N9: (48.663,157.795,110.725)
O5': (48.833,159.642,114.163)
O3': (47.551,161.980,111.264)
Image (generated by PyMOL):