Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01131:01159
Extra
PDB:
ATOM 1 O3' A A1130 88.602 85.168 187.824 1.00157.26 O
ATOM 2 P G A1131 87.435 84.109 187.500 1.00156.90 P
ATOM 3 OP1 G A1131 87.249 83.270 188.714 1.00156.53 O
ATOM 4 OP2 G A1131 87.750 83.458 186.202 1.00157.00 O
ATOM 5 O5' G A1131 86.130 85.005 187.307 1.00156.77 O
ATOM 6 C5' G A1131 85.512 85.678 188.426 1.00155.65 C
ATOM 7 C4' G A1131 84.351 86.525 187.952 1.00154.82 C
ATOM 8 O4' G A1131 84.844 87.557 187.051 1.00154.32 O
ATOM 9 C3' G A1131 83.296 85.797 187.132 1.00154.60 C
ATOM 10 O3' G A1131 82.363 85.079 187.935 1.00154.19 O
ATOM 11 C2' G A1131 82.665 86.940 186.348 1.00154.28 C
ATOM 12 O2' G A1131 81.772 87.711 187.130 1.00153.62 O
ATOM 13 C1' G A1131 83.902 87.778 186.011 1.00153.95 C
ATOM 14 N9 G A1131 84.529 87.391 184.747 1.00153.75 N
ATOM 15 C8 G A1131 85.058 86.160 184.436 1.00153.86 C
ATOM 16 N7 G A1131 85.562 86.107 183.234 1.00153.97 N
ATOM 17 C5 G A1131 85.356 87.377 182.715 1.00153.93 C
ATOM 18 C6 G A1131 85.700 87.921 181.444 1.00153.78 C
ATOM 19 O6 G A1131 86.280 87.373 180.500 1.00153.54 O
ATOM 20 N1 G A1131 85.301 89.247 181.332 1.00153.67 N
ATOM 21 C2 G A1131 84.660 89.963 182.312 1.00153.89 C
ATOM 22 N2 G A1131 84.358 91.233 182.007 1.00153.99 N
ATOM 23 N3 G A1131 84.340 89.473 183.501 1.00153.85 N
ATOM 24 C4 G A1131 84.714 88.183 183.633 1.00153.83 C
ATOM 25 P A A1132 81.870 83.620 187.466 1.00153.80 P
ATOM 26 OP1 A A1132 80.827 83.183 188.431 1.00153.35 O
ATOM 27 OP2 A A1132 83.062 82.763 187.238 1.00153.21 O
ATOM 28 O5' A A1132 81.177 83.876 186.053 1.00154.46 O
TER
ATOM 1 O3' A B1158 80.042 93.139 179.409 1.00147.41 O
ATOM 2 P A B1159 78.591 92.445 179.358 1.00147.75 P
ATOM 3 OP1 A B1159 78.630 91.431 178.270 1.00147.69 O
ATOM 4 OP2 A B1159 77.566 93.522 179.319 1.00147.35 O
ATOM 5 O5' A B1159 78.463 91.690 180.758 1.00147.41 O
ATOM 6 C5' A B1159 79.193 90.473 181.013 1.00146.69 C
ATOM 7 C4' A B1159 79.206 90.161 182.495 1.00145.89 C
ATOM 8 O4' A B1159 79.784 91.287 183.211 1.00144.84 O
ATOM 9 C3' A B1159 77.857 89.960 183.169 1.00145.62 C
ATOM 10 O3' A B1159 77.327 88.648 182.983 1.00145.66 O
ATOM 11 C2' A B1159 78.187 90.246 184.629 1.00144.84 C
ATOM 12 O2' A B1159 78.827 89.168 185.280 1.00144.68 O
ATOM 13 C1' A B1159 79.172 91.407 184.486 1.00143.83 C
ATOM 14 N9 A B1159 78.509 92.708 184.558 1.00142.28 N
ATOM 15 C8 A B1159 78.075 93.495 183.521 1.00141.56 C
ATOM 16 N7 A B1159 77.503 94.606 183.906 1.00141.16 N
ATOM 17 C5 A B1159 77.565 94.550 185.290 1.00141.31 C
ATOM 18 C6 A B1159 77.133 95.433 186.290 1.00141.24 C
ATOM 19 N6 A B1159 76.532 96.597 186.037 1.00141.40 N
ATOM 20 N1 A B1159 77.347 95.080 187.576 1.00141.03 N
ATOM 21 C2 A B1159 77.961 93.919 187.826 1.00140.98 C
ATOM 22 N3 A B1159 78.417 93.007 186.973 1.00141.15 N
ATOM 23 C4 A B1159 78.184 93.388 185.706 1.00141.55 C
ATOM 24 P C B1160 75.747 88.399 183.157 1.00145.93 P
ATOM 25 OP1 C B1160 75.522 86.932 183.101 1.00145.70 O
ATOM 26 OP2 C B1160 75.037 89.288 182.204 1.00145.48 O
ATOM 27 O5' C B1160 75.446 88.899 184.641 1.00146.70 O
TER
ATOM 2 P G A1131 87.435 84.109 187.500 1.00156.90 P
ATOM 3 OP1 G A1131 87.249 83.270 188.714 1.00156.53 O
ATOM 4 OP2 G A1131 87.750 83.458 186.202 1.00157.00 O
ATOM 5 O5' G A1131 86.130 85.005 187.307 1.00156.77 O
ATOM 6 C5' G A1131 85.512 85.678 188.426 1.00155.65 C
ATOM 7 C4' G A1131 84.351 86.525 187.952 1.00154.82 C
ATOM 8 O4' G A1131 84.844 87.557 187.051 1.00154.32 O
ATOM 9 C3' G A1131 83.296 85.797 187.132 1.00154.60 C
ATOM 10 O3' G A1131 82.363 85.079 187.935 1.00154.19 O
ATOM 11 C2' G A1131 82.665 86.940 186.348 1.00154.28 C
ATOM 12 O2' G A1131 81.772 87.711 187.130 1.00153.62 O
ATOM 13 C1' G A1131 83.902 87.778 186.011 1.00153.95 C
ATOM 14 N9 G A1131 84.529 87.391 184.747 1.00153.75 N
ATOM 15 C8 G A1131 85.058 86.160 184.436 1.00153.86 C
ATOM 16 N7 G A1131 85.562 86.107 183.234 1.00153.97 N
ATOM 17 C5 G A1131 85.356 87.377 182.715 1.00153.93 C
ATOM 18 C6 G A1131 85.700 87.921 181.444 1.00153.78 C
ATOM 19 O6 G A1131 86.280 87.373 180.500 1.00153.54 O
ATOM 20 N1 G A1131 85.301 89.247 181.332 1.00153.67 N
ATOM 21 C2 G A1131 84.660 89.963 182.312 1.00153.89 C
ATOM 22 N2 G A1131 84.358 91.233 182.007 1.00153.99 N
ATOM 23 N3 G A1131 84.340 89.473 183.501 1.00153.85 N
ATOM 24 C4 G A1131 84.714 88.183 183.633 1.00153.83 C
ATOM 25 P A A1132 81.870 83.620 187.466 1.00153.80 P
ATOM 26 OP1 A A1132 80.827 83.183 188.431 1.00153.35 O
ATOM 27 OP2 A A1132 83.062 82.763 187.238 1.00153.21 O
ATOM 28 O5' A A1132 81.177 83.876 186.053 1.00154.46 O
TER
ATOM 1 O3' A B1158 80.042 93.139 179.409 1.00147.41 O
ATOM 2 P A B1159 78.591 92.445 179.358 1.00147.75 P
ATOM 3 OP1 A B1159 78.630 91.431 178.270 1.00147.69 O
ATOM 4 OP2 A B1159 77.566 93.522 179.319 1.00147.35 O
ATOM 5 O5' A B1159 78.463 91.690 180.758 1.00147.41 O
ATOM 6 C5' A B1159 79.193 90.473 181.013 1.00146.69 C
ATOM 7 C4' A B1159 79.206 90.161 182.495 1.00145.89 C
ATOM 8 O4' A B1159 79.784 91.287 183.211 1.00144.84 O
ATOM 9 C3' A B1159 77.857 89.960 183.169 1.00145.62 C
ATOM 10 O3' A B1159 77.327 88.648 182.983 1.00145.66 O
ATOM 11 C2' A B1159 78.187 90.246 184.629 1.00144.84 C
ATOM 12 O2' A B1159 78.827 89.168 185.280 1.00144.68 O
ATOM 13 C1' A B1159 79.172 91.407 184.486 1.00143.83 C
ATOM 14 N9 A B1159 78.509 92.708 184.558 1.00142.28 N
ATOM 15 C8 A B1159 78.075 93.495 183.521 1.00141.56 C
ATOM 16 N7 A B1159 77.503 94.606 183.906 1.00141.16 N
ATOM 17 C5 A B1159 77.565 94.550 185.290 1.00141.31 C
ATOM 18 C6 A B1159 77.133 95.433 186.290 1.00141.24 C
ATOM 19 N6 A B1159 76.532 96.597 186.037 1.00141.40 N
ATOM 20 N1 A B1159 77.347 95.080 187.576 1.00141.03 N
ATOM 21 C2 A B1159 77.961 93.919 187.826 1.00140.98 C
ATOM 22 N3 A B1159 78.417 93.007 186.973 1.00141.15 N
ATOM 23 C4 A B1159 78.184 93.388 185.706 1.00141.55 C
ATOM 24 P C B1160 75.747 88.399 183.157 1.00145.93 P
ATOM 25 OP1 C B1160 75.522 86.932 183.101 1.00145.70 O
ATOM 26 OP2 C B1160 75.037 89.288 182.204 1.00145.48 O
ATOM 27 O5' C B1160 75.446 88.899 184.641 1.00146.70 O
TER
Atoms:
OP1: (87.249,83.270,188.714)
OP2: (87.750,83.458,186.202)
C3': (83.296,85.797,187.132)
C1': (83.902,87.778,186.011)
C5': (85.512,85.678,188.426)
O6: (86.280,87.373,180.500)
O4': (84.844,87.557,187.051)
C8: (85.058,86.160,184.436)
C2: (84.660,89.963,182.312)
C6: (85.700,87.921,181.444)
C5: (85.356,87.377,182.715)
C4: (84.714,88.183,183.633)
P: (87.435,84.109,187.500)
C4': (84.351,86.525,187.952)
C2': (82.665,86.940,186.348)
O2': (81.772,87.711,187.130)
N1: (85.301,89.247,181.332)
N2: (84.358,91.233,182.007)
N3: (84.340,89.473,183.501)
N7: (85.562,86.107,183.234)
N9: (84.529,87.391,184.747)
O5': (86.130,85.005,187.307)
O3': (82.363,85.079,187.935)
OP2: (87.750,83.458,186.202)
C3': (83.296,85.797,187.132)
C1': (83.902,87.778,186.011)
C5': (85.512,85.678,188.426)
O6: (86.280,87.373,180.500)
O4': (84.844,87.557,187.051)
C8: (85.058,86.160,184.436)
C2: (84.660,89.963,182.312)
C6: (85.700,87.921,181.444)
C5: (85.356,87.377,182.715)
C4: (84.714,88.183,183.633)
P: (87.435,84.109,187.500)
C4': (84.351,86.525,187.952)
C2': (82.665,86.940,186.348)
O2': (81.772,87.711,187.130)
N1: (85.301,89.247,181.332)
N2: (84.358,91.233,182.007)
N3: (84.340,89.473,183.501)
N7: (85.562,86.107,183.234)
N9: (84.529,87.391,184.747)
O5': (86.130,85.005,187.307)
O3': (82.363,85.079,187.935)
OP1: (78.630,91.431,178.270)
OP2: (77.566,93.522,179.319)
C3': (77.857,89.960,183.169)
C1': (79.172,91.407,184.486)
C5': (79.193,90.473,181.013)
O4': (79.784,91.287,183.211)
C8: (78.075,93.495,183.521)
O2': (78.827,89.168,185.280)
C6: (77.133,95.433,186.290)
C5: (77.565,94.550,185.290)
C4: (78.184,93.388,185.706)
P: (78.591,92.445,179.358)
C4': (79.206,90.161,182.495)
C2': (78.187,90.246,184.629)
C2: (77.961,93.919,187.826)
N1: (77.347,95.080,187.576)
N3: (78.417,93.007,186.973)
N6: (76.532,96.597,186.037)
N7: (77.503,94.606,183.906)
N9: (78.509,92.708,184.558)
O5': (78.463,91.690,180.758)
O3': (77.327,88.648,182.983)
OP2: (77.566,93.522,179.319)
C3': (77.857,89.960,183.169)
C1': (79.172,91.407,184.486)
C5': (79.193,90.473,181.013)
O4': (79.784,91.287,183.211)
C8: (78.075,93.495,183.521)
O2': (78.827,89.168,185.280)
C6: (77.133,95.433,186.290)
C5: (77.565,94.550,185.290)
C4: (78.184,93.388,185.706)
P: (78.591,92.445,179.358)
C4': (79.206,90.161,182.495)
C2': (78.187,90.246,184.629)
C2: (77.961,93.919,187.826)
N1: (77.347,95.080,187.576)
N3: (78.417,93.007,186.973)
N6: (76.532,96.597,186.037)
N7: (77.503,94.606,183.906)
N9: (78.509,92.708,184.558)
O5': (78.463,91.690,180.758)
O3': (77.327,88.648,182.983)
Image (generated by PyMOL):