ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:02408:02540

Extra

PDB:
ATOM 1 O3' A A2407 72.790 118.273 164.687 1.00 66.03 O
ATOM 2 P G A2408 72.665 119.155 163.348 1.00 65.58 P
ATOM 3 OP1 G A2408 71.233 119.522 163.154 1.00 64.54 O
ATOM 4 OP2 G A2408 73.389 118.433 162.279 1.00 66.38 O
ATOM 5 O5' G A2408 73.489 120.478 163.680 1.00 65.90 O
ATOM 6 C5' G A2408 72.998 121.446 164.629 1.00 65.66 C
ATOM 7 C4' G A2408 73.981 122.583 164.765 1.00 64.95 C
ATOM 8 O4' G A2408 75.242 122.053 165.247 1.00 64.76 O
ATOM 9 C3' G A2408 74.344 123.283 163.465 1.00 65.20 C
ATOM 10 O3' G A2408 73.385 124.280 163.121 1.00 65.64 O
ATOM 11 C2' G A2408 75.713 123.865 163.786 1.00 65.05 C
ATOM 12 O2' G A2408 75.631 125.034 164.574 1.00 66.22 O
ATOM 13 C1' G A2408 76.318 122.750 164.640 1.00 64.02 C
ATOM 14 N9 G A2408 77.118 121.789 163.885 1.00 62.48 N
ATOM 15 C8 G A2408 76.757 120.515 163.519 1.00 62.00 C
ATOM 16 N7 G A2408 77.688 119.890 162.854 1.00 61.40 N
ATOM 17 C5 G A2408 78.725 120.807 162.772 1.00 61.94 C
ATOM 18 C6 G A2408 79.997 120.696 162.162 1.00 62.76 C
ATOM 19 O6 G A2408 80.478 119.730 161.555 1.00 64.15 O
ATOM 20 N1 G A2408 80.739 121.864 162.310 1.00 62.36 N
ATOM 21 C2 G A2408 80.311 122.992 162.963 1.00 62.58 C
ATOM 22 N2 G A2408 81.172 124.019 162.999 1.00 63.05 N
ATOM 23 N3 G A2408 79.124 123.106 163.539 1.00 62.21 N
ATOM 24 C4 G A2408 78.389 121.984 163.404 1.00 61.90 C
ATOM 25 P A A2409 72.879 124.405 161.601 1.00 66.38 P
ATOM 26 OP1 A A2409 71.873 125.490 161.558 1.00 64.58 O
ATOM 27 OP2 A A2409 72.512 123.053 161.121 1.00 65.68 O
ATOM 28 O5' A A2409 74.178 124.863 160.803 1.00 63.90 O
TER

ATOM 1 O3' G B2539 83.894 128.386 160.798 1.00 83.37 O
ATOM 2 P G B2540 82.803 129.515 160.433 1.00 80.20 P
ATOM 3 OP1 G B2540 82.445 129.321 159.007 1.00 81.11 O
ATOM 4 OP2 G B2540 83.307 130.834 160.888 1.00 80.96 O
ATOM 5 O5' G B2540 81.520 129.138 161.297 1.00 79.29 O
ATOM 6 C5' G B2540 80.649 128.067 160.893 1.00 77.29 C
ATOM 7 C4' G B2540 79.408 128.059 161.746 1.00 76.57 C
ATOM 8 O4' G B2540 79.733 127.663 163.103 1.00 77.18 O
ATOM 9 C3' G B2540 78.744 129.410 161.914 1.00 75.69 C
ATOM 10 O3' G B2540 77.950 129.748 160.793 1.00 75.52 O
ATOM 11 C2' G B2540 77.936 129.208 163.186 1.00 76.07 C
ATOM 12 O2' G B2540 76.751 128.471 162.970 1.00 74.35 O
ATOM 13 C1' G B2540 78.913 128.380 164.019 1.00 77.59 C
ATOM 14 N9 G B2540 79.775 129.220 164.848 1.00 79.60 N
ATOM 15 C8 G B2540 81.033 129.678 164.532 1.00 80.11 C
ATOM 16 N7 G B2540 81.565 130.406 165.475 1.00 80.80 N
ATOM 17 C5 G B2540 80.601 130.435 166.476 1.00 80.42 C
ATOM 18 C6 G B2540 80.614 131.064 167.749 1.00 80.48 C
ATOM 19 O6 G B2540 81.513 131.736 168.272 1.00 82.24 O
ATOM 20 N1 G B2540 79.431 130.844 168.438 1.00 79.17 N
ATOM 21 C2 G B2540 78.376 130.113 167.976 1.00 78.82 C
ATOM 22 N2 G B2540 77.324 130.028 168.796 1.00 79.04 N
ATOM 23 N3 G B2540 78.351 129.511 166.801 1.00 79.82 N
ATOM 24 C4 G B2540 79.489 129.713 166.105 1.00 79.70 C
ATOM 25 P A B2541 77.252 131.187 160.724 1.00 74.61 P
ATOM 26 OP1 A B2541 76.619 131.319 159.390 1.00 75.26 O
ATOM 27 OP2 A B2541 78.250 132.194 161.159 1.00 76.25 O
ATOM 28 O5' A B2541 76.116 131.087 161.834 1.00 72.98 O
TER

Atoms:
OP1: (71.233,119.522,163.154)
OP2: (73.389,118.433,162.279)
C3': (74.344,123.283,163.465)
C1': (76.318,122.750,164.640)
C5': (72.998,121.446,164.629)
O6: (80.478,119.730,161.555)
O4': (75.242,122.053,165.247)
C8: (76.757,120.515,163.519)
C2: (80.311,122.992,162.963)
C6: (79.997,120.696,162.162)
C5: (78.725,120.807,162.772)
C4: (78.389,121.984,163.404)
P: (72.665,119.155,163.348)
C4': (73.981,122.583,164.765)
C2': (75.713,123.865,163.786)
O2': (75.631,125.034,164.574)
N1: (80.739,121.864,162.310)
N2: (81.172,124.019,162.999)
N3: (79.124,123.106,163.539)
N7: (77.688,119.890,162.854)
N9: (77.118,121.789,163.885)
O5': (73.489,120.478,163.680)
O3': (73.385,124.280,163.121)
OP1: (82.445,129.321,159.007)
OP2: (83.307,130.834,160.888)
C3': (78.744,129.410,161.914)
C1': (78.913,128.380,164.019)
C5': (80.649,128.067,160.893)
O6: (81.513,131.736,168.272)
O4': (79.733,127.663,163.103)
C8: (81.033,129.678,164.532)
C2: (78.376,130.113,167.976)
C6: (80.614,131.064,167.749)
C5: (80.601,130.435,166.476)
C4: (79.489,129.713,166.105)
P: (82.803,129.515,160.433)
C4': (79.408,128.059,161.746)
C2': (77.936,129.208,163.186)
O2': (76.751,128.471,162.970)
N1: (79.431,130.844,168.438)
N2: (77.324,130.028,168.796)
N3: (78.351,129.511,166.801)
N7: (81.565,130.406,165.475)
N9: (79.775,129.220,164.848)
O5': (81.520,129.138,161.297)
O3': (77.950,129.748,160.793)
Image (generated by PyMOL):
PyMOL image
show in jmol