Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1161:A1038
Extra
PDB:
ATOM 1 O3' U A1160 -125.245 -98.154 -20.798 1.00104.88 O
ATOM 2 P A A1161 -124.905 -99.514 -20.045 1.00130.92 P
ATOM 3 OP1 A A1161 -124.673-100.555 -21.078 1.00111.00 O
ATOM 4 OP2 A A1161 -125.948 -99.718 -19.006 1.00110.21 O
ATOM 5 O5' A A1161 -123.492 -99.174 -19.368 1.00113.58 O
ATOM 6 C5' A A1161 -122.323 -99.103 -20.185 1.00 96.89 C
ATOM 7 C4' A A1161 -121.205 -98.395 -19.442 1.00 91.90 C
ATOM 8 O4' A A1161 -120.951 -97.076 -19.998 1.00 88.65 O
ATOM 9 C3' A A1161 -121.490 -98.204 -17.961 1.00 93.37 C
ATOM 10 O3' A A1161 -120.320 -98.471 -17.229 1.00 98.42 O
ATOM 11 C2' A A1161 -121.906 -96.744 -17.875 1.00 92.07 C
ATOM 12 O2' A A1161 -121.560 -96.140 -16.651 1.00 89.45 O
ATOM 13 C1' A A1161 -121.142 -96.090 -19.016 1.00 84.61 C
ATOM 14 N9 A A1161 -121.993 -95.086 -19.603 1.00 88.18 N
ATOM 15 C8 A A1161 -123.185 -95.282 -20.252 1.00 99.74 C
ATOM 16 N7 A A1161 -123.757 -94.175 -20.675 1.00 98.42 N
ATOM 17 C5 A A1161 -122.871 -93.198 -20.265 1.00101.42 C
ATOM 18 C6 A A1161 -122.892 -91.809 -20.401 1.00 92.59 C
ATOM 19 N6 A A1161 -123.869 -91.160 -21.011 1.00 93.05 N
ATOM 20 N1 A A1161 -121.864 -91.121 -19.886 1.00 90.33 N
ATOM 21 C2 A A1161 -120.885 -91.805 -19.273 1.00100.74 C
ATOM 22 N3 A A1161 -120.745 -93.118 -19.074 1.00 88.50 N
ATOM 23 C4 A A1161 -121.786 -93.747 -19.604 1.00 90.95 C
ATOM 24 P A A1162 -120.233 -99.798 -16.345 1.00108.07 P
ATOM 25 OP1 A A1162 -119.585-100.872 -17.134 1.00 80.56 O
ATOM 26 OP2 A A1162 -121.565-100.042 -15.748 1.00104.51 O
ATOM 27 O5' A A1162 -119.260 -99.283 -15.191 1.00113.05 O
TER
ATOM 1 O3' C B1037 -132.754 -87.392 -21.961 1.00 89.57 O
ATOM 2 P U B1038 -132.129 -87.229 -23.426 1.00107.19 P
ATOM 3 OP1 U B1038 -132.846 -86.092 -24.076 1.00 94.53 O
ATOM 4 OP2 U B1038 -132.051 -88.589 -24.046 1.00 79.17 O
ATOM 5 O5' U B1038 -130.630 -86.771 -23.123 1.00104.79 O
ATOM 6 C5' U B1038 -130.402 -85.600 -22.381 1.00 92.46 C
ATOM 7 C4' U B1038 -128.981 -85.609 -21.860 1.00 86.36 C
ATOM 8 O4' U B1038 -128.808 -86.672 -20.891 1.00 80.54 O
ATOM 9 C3' U B1038 -127.906 -85.886 -22.897 1.00 82.91 C
ATOM 10 O3' U B1038 -127.618 -84.696 -23.616 1.00 88.91 O
ATOM 11 C2' U B1038 -126.762 -86.231 -21.961 1.00 78.68 C
ATOM 12 O2' U B1038 -126.271 -85.095 -21.270 1.00 92.83 O
ATOM 13 C1' U B1038 -127.465 -87.105 -20.940 1.00 75.39 C
ATOM 14 N1 U B1038 -127.393 -88.548 -21.225 1.00 81.31 N
ATOM 15 C2 U B1038 -126.148 -89.126 -21.268 1.00 88.37 C
ATOM 16 O2 U B1038 -125.115 -88.499 -21.101 1.00 90.66 O
ATOM 17 N3 U B1038 -126.155 -90.481 -21.514 1.00 87.17 N
ATOM 18 C4 U B1038 -127.245 -91.297 -21.713 1.00 83.07 C
ATOM 19 O4 U B1038 -127.054 -92.490 -21.918 1.00 86.86 O
ATOM 20 C5 U B1038 -128.516 -90.617 -21.650 1.00 90.14 C
ATOM 21 C6 U B1038 -128.538 -89.297 -21.410 1.00 89.99 C
ATOM 22 P A B1039 -127.836 -84.657 -25.189 1.00109.83 P
ATOM 23 OP1 A B1039 -128.162 -83.256 -25.541 1.00 83.92 O
ATOM 24 OP2 A B1039 -128.762 -85.762 -25.525 1.00109.86 O
ATOM 25 O5' A B1039 -126.403 -85.029 -25.782 1.00 90.58 O
TER
ATOM 2 P A A1161 -124.905 -99.514 -20.045 1.00130.92 P
ATOM 3 OP1 A A1161 -124.673-100.555 -21.078 1.00111.00 O
ATOM 4 OP2 A A1161 -125.948 -99.718 -19.006 1.00110.21 O
ATOM 5 O5' A A1161 -123.492 -99.174 -19.368 1.00113.58 O
ATOM 6 C5' A A1161 -122.323 -99.103 -20.185 1.00 96.89 C
ATOM 7 C4' A A1161 -121.205 -98.395 -19.442 1.00 91.90 C
ATOM 8 O4' A A1161 -120.951 -97.076 -19.998 1.00 88.65 O
ATOM 9 C3' A A1161 -121.490 -98.204 -17.961 1.00 93.37 C
ATOM 10 O3' A A1161 -120.320 -98.471 -17.229 1.00 98.42 O
ATOM 11 C2' A A1161 -121.906 -96.744 -17.875 1.00 92.07 C
ATOM 12 O2' A A1161 -121.560 -96.140 -16.651 1.00 89.45 O
ATOM 13 C1' A A1161 -121.142 -96.090 -19.016 1.00 84.61 C
ATOM 14 N9 A A1161 -121.993 -95.086 -19.603 1.00 88.18 N
ATOM 15 C8 A A1161 -123.185 -95.282 -20.252 1.00 99.74 C
ATOM 16 N7 A A1161 -123.757 -94.175 -20.675 1.00 98.42 N
ATOM 17 C5 A A1161 -122.871 -93.198 -20.265 1.00101.42 C
ATOM 18 C6 A A1161 -122.892 -91.809 -20.401 1.00 92.59 C
ATOM 19 N6 A A1161 -123.869 -91.160 -21.011 1.00 93.05 N
ATOM 20 N1 A A1161 -121.864 -91.121 -19.886 1.00 90.33 N
ATOM 21 C2 A A1161 -120.885 -91.805 -19.273 1.00100.74 C
ATOM 22 N3 A A1161 -120.745 -93.118 -19.074 1.00 88.50 N
ATOM 23 C4 A A1161 -121.786 -93.747 -19.604 1.00 90.95 C
ATOM 24 P A A1162 -120.233 -99.798 -16.345 1.00108.07 P
ATOM 25 OP1 A A1162 -119.585-100.872 -17.134 1.00 80.56 O
ATOM 26 OP2 A A1162 -121.565-100.042 -15.748 1.00104.51 O
ATOM 27 O5' A A1162 -119.260 -99.283 -15.191 1.00113.05 O
TER
ATOM 1 O3' C B1037 -132.754 -87.392 -21.961 1.00 89.57 O
ATOM 2 P U B1038 -132.129 -87.229 -23.426 1.00107.19 P
ATOM 3 OP1 U B1038 -132.846 -86.092 -24.076 1.00 94.53 O
ATOM 4 OP2 U B1038 -132.051 -88.589 -24.046 1.00 79.17 O
ATOM 5 O5' U B1038 -130.630 -86.771 -23.123 1.00104.79 O
ATOM 6 C5' U B1038 -130.402 -85.600 -22.381 1.00 92.46 C
ATOM 7 C4' U B1038 -128.981 -85.609 -21.860 1.00 86.36 C
ATOM 8 O4' U B1038 -128.808 -86.672 -20.891 1.00 80.54 O
ATOM 9 C3' U B1038 -127.906 -85.886 -22.897 1.00 82.91 C
ATOM 10 O3' U B1038 -127.618 -84.696 -23.616 1.00 88.91 O
ATOM 11 C2' U B1038 -126.762 -86.231 -21.961 1.00 78.68 C
ATOM 12 O2' U B1038 -126.271 -85.095 -21.270 1.00 92.83 O
ATOM 13 C1' U B1038 -127.465 -87.105 -20.940 1.00 75.39 C
ATOM 14 N1 U B1038 -127.393 -88.548 -21.225 1.00 81.31 N
ATOM 15 C2 U B1038 -126.148 -89.126 -21.268 1.00 88.37 C
ATOM 16 O2 U B1038 -125.115 -88.499 -21.101 1.00 90.66 O
ATOM 17 N3 U B1038 -126.155 -90.481 -21.514 1.00 87.17 N
ATOM 18 C4 U B1038 -127.245 -91.297 -21.713 1.00 83.07 C
ATOM 19 O4 U B1038 -127.054 -92.490 -21.918 1.00 86.86 O
ATOM 20 C5 U B1038 -128.516 -90.617 -21.650 1.00 90.14 C
ATOM 21 C6 U B1038 -128.538 -89.297 -21.410 1.00 89.99 C
ATOM 22 P A B1039 -127.836 -84.657 -25.189 1.00109.83 P
ATOM 23 OP1 A B1039 -128.162 -83.256 -25.541 1.00 83.92 O
ATOM 24 OP2 A B1039 -128.762 -85.762 -25.525 1.00109.86 O
ATOM 25 O5' A B1039 -126.403 -85.029 -25.782 1.00 90.58 O
TER
Atoms:
OP1: (-124.673,-100.555,-21.078)
OP2: (-125.948,-99.718,-19.006)
C3': (-121.490,-98.204,-17.961)
C1': (-121.142,-96.090,-19.016)
C5': (-122.323,-99.103,-20.185)
O4': (-120.951,-97.076,-19.998)
C8: (-123.185,-95.282,-20.252)
O2': (-121.560,-96.140,-16.651)
C6: (-122.892,-91.809,-20.401)
C5: (-122.871,-93.198,-20.265)
C4: (-121.786,-93.747,-19.604)
P: (-124.905,-99.514,-20.045)
C4': (-121.205,-98.395,-19.442)
C2': (-121.906,-96.744,-17.875)
C2: (-120.885,-91.805,-19.273)
N1: (-121.864,-91.121,-19.886)
N3: (-120.745,-93.118,-19.074)
N6: (-123.869,-91.160,-21.011)
N7: (-123.757,-94.175,-20.675)
N9: (-121.993,-95.086,-19.603)
O5': (-123.492,-99.174,-19.368)
O3': (-120.320,-98.471,-17.229)
OP2: (-125.948,-99.718,-19.006)
C3': (-121.490,-98.204,-17.961)
C1': (-121.142,-96.090,-19.016)
C5': (-122.323,-99.103,-20.185)
O4': (-120.951,-97.076,-19.998)
C8: (-123.185,-95.282,-20.252)
O2': (-121.560,-96.140,-16.651)
C6: (-122.892,-91.809,-20.401)
C5: (-122.871,-93.198,-20.265)
C4: (-121.786,-93.747,-19.604)
P: (-124.905,-99.514,-20.045)
C4': (-121.205,-98.395,-19.442)
C2': (-121.906,-96.744,-17.875)
C2: (-120.885,-91.805,-19.273)
N1: (-121.864,-91.121,-19.886)
N3: (-120.745,-93.118,-19.074)
N6: (-123.869,-91.160,-21.011)
N7: (-123.757,-94.175,-20.675)
N9: (-121.993,-95.086,-19.603)
O5': (-123.492,-99.174,-19.368)
O3': (-120.320,-98.471,-17.229)
C4: (-127.245,-91.297,-21.713)
N3: (-126.155,-90.481,-21.514)
OP1: (-132.846,-86.092,-24.076)
OP2: (-132.051,-88.589,-24.046)
C2: (-126.148,-89.126,-21.268)
C1': (-127.465,-87.105,-20.940)
C3': (-127.906,-85.886,-22.897)
O5': (-130.630,-86.771,-23.123)
O4': (-128.808,-86.672,-20.891)
C5': (-130.402,-85.600,-22.381)
P: (-132.129,-87.229,-23.426)
C4': (-128.981,-85.609,-21.860)
C2': (-126.762,-86.231,-21.961)
O2': (-126.271,-85.095,-21.270)
N1: (-127.393,-88.548,-21.225)
O4: (-127.054,-92.490,-21.918)
O2: (-125.115,-88.499,-21.101)
C6: (-128.538,-89.297,-21.410)
C5: (-128.516,-90.617,-21.650)
O3': (-127.618,-84.696,-23.616)
N3: (-126.155,-90.481,-21.514)
OP1: (-132.846,-86.092,-24.076)
OP2: (-132.051,-88.589,-24.046)
C2: (-126.148,-89.126,-21.268)
C1': (-127.465,-87.105,-20.940)
C3': (-127.906,-85.886,-22.897)
O5': (-130.630,-86.771,-23.123)
O4': (-128.808,-86.672,-20.891)
C5': (-130.402,-85.600,-22.381)
P: (-132.129,-87.229,-23.426)
C4': (-128.981,-85.609,-21.860)
C2': (-126.762,-86.231,-21.961)
O2': (-126.271,-85.095,-21.270)
N1: (-127.393,-88.548,-21.225)
O4: (-127.054,-92.490,-21.918)
O2: (-125.115,-88.499,-21.101)
C6: (-128.538,-89.297,-21.410)
C5: (-128.516,-90.617,-21.650)
O3': (-127.618,-84.696,-23.616)
Image (generated by PyMOL):