Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A557:A577
Extra
PDB:
ATOM 1 O3' G A 556 0.428 94.198 112.588 1.00 48.39 O
ATOM 2 P A A 557 -0.100 92.961 113.467 1.00 48.92 P
ATOM 3 OP1 A A 557 0.610 93.094 114.749 1.00 49.88 O
ATOM 4 OP2 A A 557 -0.025 91.690 112.704 1.00 47.13 O
ATOM 5 O5' A A 557 -1.636 93.295 113.696 1.00 50.57 O
ATOM 6 C5' A A 557 -2.132 93.607 114.998 1.00 51.05 C
ATOM 7 C4' A A 557 -1.952 95.071 115.281 1.00 52.05 C
ATOM 8 O4' A A 557 -2.400 95.834 114.136 1.00 52.10 O
ATOM 9 C3' A A 557 -2.815 95.550 116.426 1.00 53.83 C
ATOM 10 O3' A A 557 -2.224 95.309 117.683 1.00 55.84 O
ATOM 11 C2' A A 557 -3.055 97.012 116.088 1.00 53.54 C
ATOM 12 O2' A A 557 -1.999 97.878 116.452 1.00 52.51 O
ATOM 13 C1' A A 557 -3.206 96.922 114.566 1.00 52.57 C
ATOM 14 N9 A A 557 -4.586 96.629 114.172 1.00 52.30 N
ATOM 15 C8 A A 557 -5.065 95.528 113.501 1.00 53.68 C
ATOM 16 N7 A A 557 -6.365 95.530 113.339 1.00 52.99 N
ATOM 17 C5 A A 557 -6.767 96.716 113.929 1.00 52.18 C
ATOM 18 C6 A A 557 -8.028 97.304 114.094 1.00 51.59 C
ATOM 19 N6 A A 557 -9.168 96.746 113.689 1.00 51.97 N
ATOM 20 N1 A A 557 -8.081 98.499 114.710 1.00 52.52 N
ATOM 21 C2 A A 557 -6.941 99.049 115.147 1.00 52.57 C
ATOM 22 N3 A A 557 -5.700 98.589 115.066 1.00 53.13 N
ATOM 23 C4 A A 557 -5.681 97.406 114.435 1.00 52.25 C
ATOM 24 P C A 558 -3.166 95.008 118.937 1.00 58.67 P
ATOM 25 OP1 C A 558 -2.296 94.554 120.051 1.00 57.72 O
ATOM 26 OP2 C A 558 -4.288 94.142 118.484 1.00 57.33 O
ATOM 27 O5' C A 558 -3.739 96.448 119.298 1.00 58.26 O
TER
ATOM 1 O3' G B 576 -7.710 89.576 106.950 1.00 65.91 O
ATOM 2 P U B 577 -8.185 90.443 105.679 1.00 68.08 P
ATOM 3 OP1 U B 577 -8.922 89.517 104.768 1.00 67.63 O
ATOM 4 OP2 U B 577 -7.045 91.243 105.149 1.00 66.96 O
ATOM 5 O5' U B 577 -9.207 91.484 106.324 1.00 66.80 O
ATOM 6 C5' U B 577 -10.534 91.067 106.730 1.00 65.92 C
ATOM 7 C4' U B 577 -11.005 91.860 107.929 1.00 63.51 C
ATOM 8 O4' U B 577 -10.333 91.411 109.131 1.00 61.59 O
ATOM 9 C3' U B 577 -10.741 93.353 107.882 1.00 62.85 C
ATOM 10 O3' U B 577 -11.725 94.043 107.124 1.00 63.10 O
ATOM 11 C2' U B 577 -10.784 93.740 109.354 1.00 62.46 C
ATOM 12 O2' U B 577 -12.098 93.935 109.834 1.00 63.51 O
ATOM 13 C1' U B 577 -10.171 92.503 110.021 1.00 60.70 C
ATOM 14 N1 U B 577 -8.743 92.626 110.365 1.00 58.71 N
ATOM 15 C2 U B 577 -8.370 93.586 111.303 1.00 57.50 C
ATOM 16 O2 U B 577 -9.156 94.364 111.809 1.00 54.56 O
ATOM 17 N3 U B 577 -7.035 93.591 111.616 1.00 56.98 N
ATOM 18 C4 U B 577 -6.051 92.763 111.102 1.00 57.75 C
ATOM 19 O4 U B 577 -4.934 92.773 111.611 1.00 58.48 O
ATOM 20 C5 U B 577 -6.501 91.835 110.118 1.00 57.20 C
ATOM 21 C6 U B 577 -7.794 91.795 109.790 1.00 58.06 C
ATOM 22 P A B 578 -11.329 95.400 106.368 1.00 64.55 P
ATOM 23 OP1 A B 578 -12.493 95.914 105.611 1.00 64.35 O
ATOM 24 OP2 A B 578 -10.065 95.101 105.646 1.00 66.43 O
ATOM 25 O5' A B 578 -11.036 96.403 107.560 1.00 61.57 O
TER
ATOM 2 P A A 557 -0.100 92.961 113.467 1.00 48.92 P
ATOM 3 OP1 A A 557 0.610 93.094 114.749 1.00 49.88 O
ATOM 4 OP2 A A 557 -0.025 91.690 112.704 1.00 47.13 O
ATOM 5 O5' A A 557 -1.636 93.295 113.696 1.00 50.57 O
ATOM 6 C5' A A 557 -2.132 93.607 114.998 1.00 51.05 C
ATOM 7 C4' A A 557 -1.952 95.071 115.281 1.00 52.05 C
ATOM 8 O4' A A 557 -2.400 95.834 114.136 1.00 52.10 O
ATOM 9 C3' A A 557 -2.815 95.550 116.426 1.00 53.83 C
ATOM 10 O3' A A 557 -2.224 95.309 117.683 1.00 55.84 O
ATOM 11 C2' A A 557 -3.055 97.012 116.088 1.00 53.54 C
ATOM 12 O2' A A 557 -1.999 97.878 116.452 1.00 52.51 O
ATOM 13 C1' A A 557 -3.206 96.922 114.566 1.00 52.57 C
ATOM 14 N9 A A 557 -4.586 96.629 114.172 1.00 52.30 N
ATOM 15 C8 A A 557 -5.065 95.528 113.501 1.00 53.68 C
ATOM 16 N7 A A 557 -6.365 95.530 113.339 1.00 52.99 N
ATOM 17 C5 A A 557 -6.767 96.716 113.929 1.00 52.18 C
ATOM 18 C6 A A 557 -8.028 97.304 114.094 1.00 51.59 C
ATOM 19 N6 A A 557 -9.168 96.746 113.689 1.00 51.97 N
ATOM 20 N1 A A 557 -8.081 98.499 114.710 1.00 52.52 N
ATOM 21 C2 A A 557 -6.941 99.049 115.147 1.00 52.57 C
ATOM 22 N3 A A 557 -5.700 98.589 115.066 1.00 53.13 N
ATOM 23 C4 A A 557 -5.681 97.406 114.435 1.00 52.25 C
ATOM 24 P C A 558 -3.166 95.008 118.937 1.00 58.67 P
ATOM 25 OP1 C A 558 -2.296 94.554 120.051 1.00 57.72 O
ATOM 26 OP2 C A 558 -4.288 94.142 118.484 1.00 57.33 O
ATOM 27 O5' C A 558 -3.739 96.448 119.298 1.00 58.26 O
TER
ATOM 1 O3' G B 576 -7.710 89.576 106.950 1.00 65.91 O
ATOM 2 P U B 577 -8.185 90.443 105.679 1.00 68.08 P
ATOM 3 OP1 U B 577 -8.922 89.517 104.768 1.00 67.63 O
ATOM 4 OP2 U B 577 -7.045 91.243 105.149 1.00 66.96 O
ATOM 5 O5' U B 577 -9.207 91.484 106.324 1.00 66.80 O
ATOM 6 C5' U B 577 -10.534 91.067 106.730 1.00 65.92 C
ATOM 7 C4' U B 577 -11.005 91.860 107.929 1.00 63.51 C
ATOM 8 O4' U B 577 -10.333 91.411 109.131 1.00 61.59 O
ATOM 9 C3' U B 577 -10.741 93.353 107.882 1.00 62.85 C
ATOM 10 O3' U B 577 -11.725 94.043 107.124 1.00 63.10 O
ATOM 11 C2' U B 577 -10.784 93.740 109.354 1.00 62.46 C
ATOM 12 O2' U B 577 -12.098 93.935 109.834 1.00 63.51 O
ATOM 13 C1' U B 577 -10.171 92.503 110.021 1.00 60.70 C
ATOM 14 N1 U B 577 -8.743 92.626 110.365 1.00 58.71 N
ATOM 15 C2 U B 577 -8.370 93.586 111.303 1.00 57.50 C
ATOM 16 O2 U B 577 -9.156 94.364 111.809 1.00 54.56 O
ATOM 17 N3 U B 577 -7.035 93.591 111.616 1.00 56.98 N
ATOM 18 C4 U B 577 -6.051 92.763 111.102 1.00 57.75 C
ATOM 19 O4 U B 577 -4.934 92.773 111.611 1.00 58.48 O
ATOM 20 C5 U B 577 -6.501 91.835 110.118 1.00 57.20 C
ATOM 21 C6 U B 577 -7.794 91.795 109.790 1.00 58.06 C
ATOM 22 P A B 578 -11.329 95.400 106.368 1.00 64.55 P
ATOM 23 OP1 A B 578 -12.493 95.914 105.611 1.00 64.35 O
ATOM 24 OP2 A B 578 -10.065 95.101 105.646 1.00 66.43 O
ATOM 25 O5' A B 578 -11.036 96.403 107.560 1.00 61.57 O
TER
Atoms:
OP1: (0.610,93.094,114.749)
OP2: (-0.025,91.690,112.704)
C3': (-2.815,95.550,116.426)
C1': (-3.206,96.922,114.566)
C5': (-2.132,93.607,114.998)
O4': (-2.400,95.834,114.136)
C8: (-5.065,95.528,113.501)
O2': (-1.999,97.878,116.452)
C6: (-8.028,97.304,114.094)
C5: (-6.767,96.716,113.929)
C4: (-5.681,97.406,114.435)
P: (-0.100,92.961,113.467)
C4': (-1.952,95.071,115.281)
C2': (-3.055,97.012,116.088)
C2: (-6.941,99.049,115.147)
N1: (-8.081,98.499,114.710)
N3: (-5.700,98.589,115.066)
N6: (-9.168,96.746,113.689)
N7: (-6.365,95.530,113.339)
N9: (-4.586,96.629,114.172)
O5': (-1.636,93.295,113.696)
O3': (-2.224,95.309,117.683)
OP2: (-0.025,91.690,112.704)
C3': (-2.815,95.550,116.426)
C1': (-3.206,96.922,114.566)
C5': (-2.132,93.607,114.998)
O4': (-2.400,95.834,114.136)
C8: (-5.065,95.528,113.501)
O2': (-1.999,97.878,116.452)
C6: (-8.028,97.304,114.094)
C5: (-6.767,96.716,113.929)
C4: (-5.681,97.406,114.435)
P: (-0.100,92.961,113.467)
C4': (-1.952,95.071,115.281)
C2': (-3.055,97.012,116.088)
C2: (-6.941,99.049,115.147)
N1: (-8.081,98.499,114.710)
N3: (-5.700,98.589,115.066)
N6: (-9.168,96.746,113.689)
N7: (-6.365,95.530,113.339)
N9: (-4.586,96.629,114.172)
O5': (-1.636,93.295,113.696)
O3': (-2.224,95.309,117.683)
C4: (-6.051,92.763,111.102)
N3: (-7.035,93.591,111.616)
OP1: (-8.922,89.517,104.768)
OP2: (-7.045,91.243,105.149)
C2: (-8.370,93.586,111.303)
C1': (-10.171,92.503,110.021)
C3': (-10.741,93.353,107.882)
O5': (-9.207,91.484,106.324)
O4': (-10.333,91.411,109.131)
C5': (-10.534,91.067,106.730)
P: (-8.185,90.443,105.679)
C4': (-11.005,91.860,107.929)
C2': (-10.784,93.740,109.354)
O2': (-12.098,93.935,109.834)
N1: (-8.743,92.626,110.365)
O4: (-4.934,92.773,111.611)
O2: (-9.156,94.364,111.809)
C6: (-7.794,91.795,109.790)
C5: (-6.501,91.835,110.118)
O3': (-11.725,94.043,107.124)
N3: (-7.035,93.591,111.616)
OP1: (-8.922,89.517,104.768)
OP2: (-7.045,91.243,105.149)
C2: (-8.370,93.586,111.303)
C1': (-10.171,92.503,110.021)
C3': (-10.741,93.353,107.882)
O5': (-9.207,91.484,106.324)
O4': (-10.333,91.411,109.131)
C5': (-10.534,91.067,106.730)
P: (-8.185,90.443,105.679)
C4': (-11.005,91.860,107.929)
C2': (-10.784,93.740,109.354)
O2': (-12.098,93.935,109.834)
N1: (-8.743,92.626,110.365)
O4: (-4.934,92.773,111.611)
O2: (-9.156,94.364,111.809)
C6: (-7.794,91.795,109.790)
C5: (-6.501,91.835,110.118)
O3': (-11.725,94.043,107.124)
Image (generated by PyMOL):