Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12653:12783
Extra
PDB:
ATOM 1 O3' A A2652 -5.658 26.229 11.452 1.00 61.14 O
ATOM 2 P G A2653 -5.021 26.825 12.810 1.00 64.02 P
ATOM 3 OP1 G A2653 -3.738 27.525 12.436 1.00 63.97 O
ATOM 4 OP2 G A2653 -4.956 25.700 13.794 1.00 63.41 O
ATOM 5 O5' G A2653 -6.124 27.902 13.283 1.00 64.40 O
ATOM 6 C5' G A2653 -6.094 29.257 12.848 1.00 64.86 C
ATOM 7 C4' G A2653 -7.047 30.108 13.654 1.00 65.05 C
ATOM 8 O4' G A2653 -8.374 29.530 13.605 1.00 65.30 O
ATOM 9 C3' G A2653 -6.745 30.204 15.134 1.00 64.47 C
ATOM 10 O3' G A2653 -5.784 31.196 15.444 1.00 64.35 O
ATOM 11 C2' G A2653 -8.103 30.463 15.759 1.00 64.70 C
ATOM 12 O2' G A2653 -8.425 31.832 15.683 1.00 65.16 O
ATOM 13 C1' G A2653 -9.023 29.684 14.836 1.00 65.09 C
ATOM 14 N9 G A2653 -9.306 28.349 15.349 1.00 64.68 N
ATOM 15 C8 G A2653 -8.795 27.198 14.840 1.00 64.44 C
ATOM 16 N7 G A2653 -9.187 26.135 15.476 1.00 64.10 N
ATOM 17 C5 G A2653 -10.027 26.622 16.458 1.00 64.11 C
ATOM 18 C6 G A2653 -10.772 25.927 17.450 1.00 63.84 C
ATOM 19 O6 G A2653 -10.824 24.697 17.630 1.00 63.53 O
ATOM 20 N1 G A2653 -11.514 26.822 18.235 1.00 64.00 N
ATOM 21 C2 G A2653 -11.518 28.198 18.071 1.00 64.38 C
ATOM 22 N2 G A2653 -12.277 28.935 18.896 1.00 64.51 N
ATOM 23 N3 G A2653 -10.829 28.838 17.149 1.00 64.63 N
ATOM 24 C4 G A2653 -10.114 27.994 16.384 1.00 64.48 C
ATOM 25 P A A2654 -4.579 30.831 16.429 1.00 60.54 P
ATOM 26 OP1 A A2654 -3.751 32.044 16.581 1.00 60.57 O
ATOM 27 OP2 A A2654 -3.981 29.635 15.896 1.00 60.26 O
ATOM 28 O5' A A2654 -5.315 30.509 17.797 1.00 60.21 O
TER
ATOM 1 O3' G B2782 -13.806 31.812 23.103 1.00 78.18 O
ATOM 2 P G B2783 -12.619 32.756 23.591 1.00 68.89 P
ATOM 3 OP1 G B2783 -11.797 31.960 24.554 1.00 68.16 O
ATOM 4 OP2 G B2783 -13.241 34.037 24.050 1.00 69.29 O
ATOM 5 O5' G B2783 -11.793 33.023 22.244 1.00 69.12 O
ATOM 6 C5' G B2783 -10.878 32.069 21.721 1.00 68.75 C
ATOM 7 C4' G B2783 -10.053 32.670 20.612 1.00 69.01 C
ATOM 8 O4' G B2783 -10.849 32.765 19.401 1.00 69.65 O
ATOM 9 C3' G B2783 -9.612 34.090 20.833 1.00 69.20 C
ATOM 10 O3' G B2783 -8.508 34.206 21.680 1.00 68.66 O
ATOM 11 C2' G B2783 -9.374 34.578 19.412 1.00 69.70 C
ATOM 12 O2' G B2783 -8.231 33.975 18.844 1.00 69.39 O
ATOM 13 C1' G B2783 -10.579 33.986 18.738 1.00 70.10 C
ATOM 14 N9 G B2783 -11.736 34.872 18.893 1.00 70.64 N
ATOM 15 C8 G B2783 -12.591 34.929 19.956 1.00 70.57 C
ATOM 16 N7 G B2783 -13.494 35.857 19.845 1.00 71.14 N
ATOM 17 C5 G B2783 -13.184 36.459 18.638 1.00 71.61 C
ATOM 18 C6 G B2783 -13.828 37.526 17.971 1.00 72.33 C
ATOM 19 O6 G B2783 -14.819 38.152 18.366 1.00 72.70 O
ATOM 20 N1 G B2783 -13.189 37.820 16.761 1.00 72.62 N
ATOM 21 C2 G B2783 -12.097 37.164 16.275 1.00 72.26 C
ATOM 22 N2 G B2783 -11.620 37.570 15.111 1.00 72.63 N
ATOM 23 N3 G B2783 -11.506 36.176 16.879 1.00 71.59 N
ATOM 24 C4 G B2783 -12.093 35.874 18.047 1.00 71.30 C
ATOM 25 P A B2784 -8.029 35.659 22.141 1.00 62.15 P
ATOM 26 OP1 A B2784 -7.038 35.475 23.231 1.00 61.51 O
ATOM 27 OP2 A B2784 -9.268 36.466 22.397 1.00 62.66 O
ATOM 28 O5' A B2784 -7.297 36.194 20.847 1.00 62.49 O
TER
ATOM 2 P G A2653 -5.021 26.825 12.810 1.00 64.02 P
ATOM 3 OP1 G A2653 -3.738 27.525 12.436 1.00 63.97 O
ATOM 4 OP2 G A2653 -4.956 25.700 13.794 1.00 63.41 O
ATOM 5 O5' G A2653 -6.124 27.902 13.283 1.00 64.40 O
ATOM 6 C5' G A2653 -6.094 29.257 12.848 1.00 64.86 C
ATOM 7 C4' G A2653 -7.047 30.108 13.654 1.00 65.05 C
ATOM 8 O4' G A2653 -8.374 29.530 13.605 1.00 65.30 O
ATOM 9 C3' G A2653 -6.745 30.204 15.134 1.00 64.47 C
ATOM 10 O3' G A2653 -5.784 31.196 15.444 1.00 64.35 O
ATOM 11 C2' G A2653 -8.103 30.463 15.759 1.00 64.70 C
ATOM 12 O2' G A2653 -8.425 31.832 15.683 1.00 65.16 O
ATOM 13 C1' G A2653 -9.023 29.684 14.836 1.00 65.09 C
ATOM 14 N9 G A2653 -9.306 28.349 15.349 1.00 64.68 N
ATOM 15 C8 G A2653 -8.795 27.198 14.840 1.00 64.44 C
ATOM 16 N7 G A2653 -9.187 26.135 15.476 1.00 64.10 N
ATOM 17 C5 G A2653 -10.027 26.622 16.458 1.00 64.11 C
ATOM 18 C6 G A2653 -10.772 25.927 17.450 1.00 63.84 C
ATOM 19 O6 G A2653 -10.824 24.697 17.630 1.00 63.53 O
ATOM 20 N1 G A2653 -11.514 26.822 18.235 1.00 64.00 N
ATOM 21 C2 G A2653 -11.518 28.198 18.071 1.00 64.38 C
ATOM 22 N2 G A2653 -12.277 28.935 18.896 1.00 64.51 N
ATOM 23 N3 G A2653 -10.829 28.838 17.149 1.00 64.63 N
ATOM 24 C4 G A2653 -10.114 27.994 16.384 1.00 64.48 C
ATOM 25 P A A2654 -4.579 30.831 16.429 1.00 60.54 P
ATOM 26 OP1 A A2654 -3.751 32.044 16.581 1.00 60.57 O
ATOM 27 OP2 A A2654 -3.981 29.635 15.896 1.00 60.26 O
ATOM 28 O5' A A2654 -5.315 30.509 17.797 1.00 60.21 O
TER
ATOM 1 O3' G B2782 -13.806 31.812 23.103 1.00 78.18 O
ATOM 2 P G B2783 -12.619 32.756 23.591 1.00 68.89 P
ATOM 3 OP1 G B2783 -11.797 31.960 24.554 1.00 68.16 O
ATOM 4 OP2 G B2783 -13.241 34.037 24.050 1.00 69.29 O
ATOM 5 O5' G B2783 -11.793 33.023 22.244 1.00 69.12 O
ATOM 6 C5' G B2783 -10.878 32.069 21.721 1.00 68.75 C
ATOM 7 C4' G B2783 -10.053 32.670 20.612 1.00 69.01 C
ATOM 8 O4' G B2783 -10.849 32.765 19.401 1.00 69.65 O
ATOM 9 C3' G B2783 -9.612 34.090 20.833 1.00 69.20 C
ATOM 10 O3' G B2783 -8.508 34.206 21.680 1.00 68.66 O
ATOM 11 C2' G B2783 -9.374 34.578 19.412 1.00 69.70 C
ATOM 12 O2' G B2783 -8.231 33.975 18.844 1.00 69.39 O
ATOM 13 C1' G B2783 -10.579 33.986 18.738 1.00 70.10 C
ATOM 14 N9 G B2783 -11.736 34.872 18.893 1.00 70.64 N
ATOM 15 C8 G B2783 -12.591 34.929 19.956 1.00 70.57 C
ATOM 16 N7 G B2783 -13.494 35.857 19.845 1.00 71.14 N
ATOM 17 C5 G B2783 -13.184 36.459 18.638 1.00 71.61 C
ATOM 18 C6 G B2783 -13.828 37.526 17.971 1.00 72.33 C
ATOM 19 O6 G B2783 -14.819 38.152 18.366 1.00 72.70 O
ATOM 20 N1 G B2783 -13.189 37.820 16.761 1.00 72.62 N
ATOM 21 C2 G B2783 -12.097 37.164 16.275 1.00 72.26 C
ATOM 22 N2 G B2783 -11.620 37.570 15.111 1.00 72.63 N
ATOM 23 N3 G B2783 -11.506 36.176 16.879 1.00 71.59 N
ATOM 24 C4 G B2783 -12.093 35.874 18.047 1.00 71.30 C
ATOM 25 P A B2784 -8.029 35.659 22.141 1.00 62.15 P
ATOM 26 OP1 A B2784 -7.038 35.475 23.231 1.00 61.51 O
ATOM 27 OP2 A B2784 -9.268 36.466 22.397 1.00 62.66 O
ATOM 28 O5' A B2784 -7.297 36.194 20.847 1.00 62.49 O
TER
Atoms:
OP1: (-3.738,27.525,12.436)
OP2: (-4.956,25.700,13.794)
C3': (-6.745,30.204,15.134)
C1': (-9.023,29.684,14.836)
C5': (-6.094,29.257,12.848)
O6: (-10.824,24.697,17.630)
O4': (-8.374,29.530,13.605)
C8: (-8.795,27.198,14.840)
C2: (-11.518,28.198,18.071)
C6: (-10.772,25.927,17.450)
C5: (-10.027,26.622,16.458)
C4: (-10.114,27.994,16.384)
P: (-5.021,26.825,12.810)
C4': (-7.047,30.108,13.654)
C2': (-8.103,30.463,15.759)
O2': (-8.425,31.832,15.683)
N1: (-11.514,26.822,18.235)
N2: (-12.277,28.935,18.896)
N3: (-10.829,28.838,17.149)
N7: (-9.187,26.135,15.476)
N9: (-9.306,28.349,15.349)
O5': (-6.124,27.902,13.283)
O3': (-5.784,31.196,15.444)
OP2: (-4.956,25.700,13.794)
C3': (-6.745,30.204,15.134)
C1': (-9.023,29.684,14.836)
C5': (-6.094,29.257,12.848)
O6: (-10.824,24.697,17.630)
O4': (-8.374,29.530,13.605)
C8: (-8.795,27.198,14.840)
C2: (-11.518,28.198,18.071)
C6: (-10.772,25.927,17.450)
C5: (-10.027,26.622,16.458)
C4: (-10.114,27.994,16.384)
P: (-5.021,26.825,12.810)
C4': (-7.047,30.108,13.654)
C2': (-8.103,30.463,15.759)
O2': (-8.425,31.832,15.683)
N1: (-11.514,26.822,18.235)
N2: (-12.277,28.935,18.896)
N3: (-10.829,28.838,17.149)
N7: (-9.187,26.135,15.476)
N9: (-9.306,28.349,15.349)
O5': (-6.124,27.902,13.283)
O3': (-5.784,31.196,15.444)
OP1: (-11.797,31.960,24.554)
OP2: (-13.241,34.037,24.050)
C3': (-9.612,34.090,20.833)
C1': (-10.579,33.986,18.738)
C5': (-10.878,32.069,21.721)
O6: (-14.819,38.152,18.366)
O4': (-10.849,32.765,19.401)
C8: (-12.591,34.929,19.956)
C2: (-12.097,37.164,16.275)
C6: (-13.828,37.526,17.971)
C5: (-13.184,36.459,18.638)
C4: (-12.093,35.874,18.047)
P: (-12.619,32.756,23.591)
C4': (-10.053,32.670,20.612)
C2': (-9.374,34.578,19.412)
O2': (-8.231,33.975,18.844)
N1: (-13.189,37.820,16.761)
N2: (-11.620,37.570,15.111)
N3: (-11.506,36.176,16.879)
N7: (-13.494,35.857,19.845)
N9: (-11.736,34.872,18.893)
O5': (-11.793,33.023,22.244)
O3': (-8.508,34.206,21.680)
OP2: (-13.241,34.037,24.050)
C3': (-9.612,34.090,20.833)
C1': (-10.579,33.986,18.738)
C5': (-10.878,32.069,21.721)
O6: (-14.819,38.152,18.366)
O4': (-10.849,32.765,19.401)
C8: (-12.591,34.929,19.956)
C2: (-12.097,37.164,16.275)
C6: (-13.828,37.526,17.971)
C5: (-13.184,36.459,18.638)
C4: (-12.093,35.874,18.047)
P: (-12.619,32.756,23.591)
C4': (-10.053,32.670,20.612)
C2': (-9.374,34.578,19.412)
O2': (-8.231,33.975,18.844)
N1: (-13.189,37.820,16.761)
N2: (-11.620,37.570,15.111)
N3: (-11.506,36.176,16.879)
N7: (-13.494,35.857,19.845)
N9: (-11.736,34.872,18.893)
O5': (-11.793,33.023,22.244)
O3': (-8.508,34.206,21.680)
Image (generated by PyMOL):