Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2102:A2084
Extra
PDB:
ATOM 1 O3' G A2101 -10.203 173.346 112.515 1.00 0.79 O
ATOM 2 P A A2102 -11.106 174.282 111.593 1.00 2.65 P
ATOM 3 OP1 A A2102 -12.520 173.821 111.617 1.00 2.65 O
ATOM 4 OP2 A A2102 -10.401 174.448 110.283 1.00 2.65 O
ATOM 5 O5' A A2102 -10.980 175.668 112.358 1.00 11.02 O
ATOM 6 C5' A A2102 -12.139 176.386 112.759 1.00 11.02 C
ATOM 7 C4' A A2102 -12.384 176.195 114.229 1.00 11.02 C
ATOM 8 O4' A A2102 -11.128 176.362 114.933 1.00 11.02 O
ATOM 9 C3' A A2102 -13.345 177.223 114.790 1.00 11.02 C
ATOM 10 O3' A A2102 -14.412 176.644 115.577 1.00 11.02 O
ATOM 11 C2' A A2102 -12.420 178.322 115.318 1.00 11.02 C
ATOM 12 O2' A A2102 -12.879 179.120 116.393 1.00 11.02 O
ATOM 13 C1' A A2102 -11.103 177.599 115.601 1.00 11.02 C
ATOM 14 N9 A A2102 -9.999 178.373 115.036 1.00 0.90 N
ATOM 15 C8 A A2102 -9.459 178.243 113.782 1.00 0.91 C
ATOM 16 N7 A A2102 -8.485 179.086 113.532 1.00 0.96 N
ATOM 17 C5 A A2102 -8.368 179.812 114.700 1.00 0.87 C
ATOM 18 C6 A A2102 -7.510 180.834 115.072 1.00 0.79 C
ATOM 19 N6 A A2102 -6.563 181.322 114.279 1.00 0.79 N
ATOM 20 N1 A A2102 -7.648 181.350 116.303 1.00 0.80 N
ATOM 21 C2 A A2102 -8.595 180.858 117.099 1.00 0.89 C
ATOM 22 N3 A A2102 -9.465 179.887 116.868 1.00 0.95 N
ATOM 23 C4 A A2102 -9.296 179.393 115.634 1.00 0.95 C
ATOM 24 P C A2103 -14.239 176.348 117.156 1.00 48.93 P
ATOM 25 OP1 C A2103 -15.415 176.934 117.850 1.00 52.82 O
ATOM 26 OP2 C A2103 -12.873 176.674 117.614 1.00 53.04 O
ATOM 27 O5' C A2103 -14.371 174.769 117.256 1.00 17.00 O
TER
ATOM 1 O3' C B2083 -3.393 179.217 104.389 1.00 13.05 O
ATOM 2 P U B2084 -2.186 178.700 105.337 1.00 24.20 P
ATOM 3 OP1 U B2084 -0.866 179.133 104.760 1.00 39.78 O
ATOM 4 OP2 U B2084 -2.413 177.258 105.609 1.00 39.78 O
ATOM 5 O5' U B2084 -2.407 179.532 106.675 1.00 0.79 O
ATOM 6 C5' U B2084 -2.306 180.958 106.628 1.00 0.79 C
ATOM 7 C4' U B2084 -2.376 181.568 108.004 1.00 0.79 C
ATOM 8 O4' U B2084 -3.697 181.398 108.554 1.00 0.79 O
ATOM 9 C3' U B2084 -1.390 181.084 109.045 1.00 0.79 C
ATOM 10 O3' U B2084 -0.907 182.201 109.755 1.00 0.79 O
ATOM 11 C2' U B2084 -2.244 180.218 109.961 1.00 0.79 C
ATOM 12 O2' U B2084 -1.796 180.264 111.301 1.00 0.79 O
ATOM 13 C1' U B2084 -3.604 180.895 109.859 1.00 0.79 C
ATOM 14 N1 U B2084 -4.742 179.994 110.056 1.00 13.87 N
ATOM 15 C2 U B2084 -5.633 180.292 111.072 1.00 13.87 C
ATOM 16 O2 U B2084 -5.458 181.203 111.869 1.00 13.87 O
ATOM 17 N3 U B2084 -6.730 179.476 111.129 1.00 13.87 N
ATOM 18 C4 U B2084 -6.998 178.400 110.310 1.00 13.87 C
ATOM 19 O4 U B2084 -8.090 177.833 110.389 1.00 13.87 O
ATOM 20 C5 U B2084 -5.993 178.128 109.335 1.00 13.87 C
ATOM 21 C6 U B2084 -4.932 178.916 109.241 1.00 13.87 C
ATOM 22 P A B2085 0.647 182.560 109.676 1.00 59.97 P
ATOM 23 OP1 A B2085 0.745 183.909 109.087 1.00 57.74 O
ATOM 24 OP2 A B2085 1.389 181.431 109.058 1.00 57.74 O
ATOM 25 O5' A B2085 1.066 182.647 111.197 1.00 13.29 O
TER
ATOM 2 P A A2102 -11.106 174.282 111.593 1.00 2.65 P
ATOM 3 OP1 A A2102 -12.520 173.821 111.617 1.00 2.65 O
ATOM 4 OP2 A A2102 -10.401 174.448 110.283 1.00 2.65 O
ATOM 5 O5' A A2102 -10.980 175.668 112.358 1.00 11.02 O
ATOM 6 C5' A A2102 -12.139 176.386 112.759 1.00 11.02 C
ATOM 7 C4' A A2102 -12.384 176.195 114.229 1.00 11.02 C
ATOM 8 O4' A A2102 -11.128 176.362 114.933 1.00 11.02 O
ATOM 9 C3' A A2102 -13.345 177.223 114.790 1.00 11.02 C
ATOM 10 O3' A A2102 -14.412 176.644 115.577 1.00 11.02 O
ATOM 11 C2' A A2102 -12.420 178.322 115.318 1.00 11.02 C
ATOM 12 O2' A A2102 -12.879 179.120 116.393 1.00 11.02 O
ATOM 13 C1' A A2102 -11.103 177.599 115.601 1.00 11.02 C
ATOM 14 N9 A A2102 -9.999 178.373 115.036 1.00 0.90 N
ATOM 15 C8 A A2102 -9.459 178.243 113.782 1.00 0.91 C
ATOM 16 N7 A A2102 -8.485 179.086 113.532 1.00 0.96 N
ATOM 17 C5 A A2102 -8.368 179.812 114.700 1.00 0.87 C
ATOM 18 C6 A A2102 -7.510 180.834 115.072 1.00 0.79 C
ATOM 19 N6 A A2102 -6.563 181.322 114.279 1.00 0.79 N
ATOM 20 N1 A A2102 -7.648 181.350 116.303 1.00 0.80 N
ATOM 21 C2 A A2102 -8.595 180.858 117.099 1.00 0.89 C
ATOM 22 N3 A A2102 -9.465 179.887 116.868 1.00 0.95 N
ATOM 23 C4 A A2102 -9.296 179.393 115.634 1.00 0.95 C
ATOM 24 P C A2103 -14.239 176.348 117.156 1.00 48.93 P
ATOM 25 OP1 C A2103 -15.415 176.934 117.850 1.00 52.82 O
ATOM 26 OP2 C A2103 -12.873 176.674 117.614 1.00 53.04 O
ATOM 27 O5' C A2103 -14.371 174.769 117.256 1.00 17.00 O
TER
ATOM 1 O3' C B2083 -3.393 179.217 104.389 1.00 13.05 O
ATOM 2 P U B2084 -2.186 178.700 105.337 1.00 24.20 P
ATOM 3 OP1 U B2084 -0.866 179.133 104.760 1.00 39.78 O
ATOM 4 OP2 U B2084 -2.413 177.258 105.609 1.00 39.78 O
ATOM 5 O5' U B2084 -2.407 179.532 106.675 1.00 0.79 O
ATOM 6 C5' U B2084 -2.306 180.958 106.628 1.00 0.79 C
ATOM 7 C4' U B2084 -2.376 181.568 108.004 1.00 0.79 C
ATOM 8 O4' U B2084 -3.697 181.398 108.554 1.00 0.79 O
ATOM 9 C3' U B2084 -1.390 181.084 109.045 1.00 0.79 C
ATOM 10 O3' U B2084 -0.907 182.201 109.755 1.00 0.79 O
ATOM 11 C2' U B2084 -2.244 180.218 109.961 1.00 0.79 C
ATOM 12 O2' U B2084 -1.796 180.264 111.301 1.00 0.79 O
ATOM 13 C1' U B2084 -3.604 180.895 109.859 1.00 0.79 C
ATOM 14 N1 U B2084 -4.742 179.994 110.056 1.00 13.87 N
ATOM 15 C2 U B2084 -5.633 180.292 111.072 1.00 13.87 C
ATOM 16 O2 U B2084 -5.458 181.203 111.869 1.00 13.87 O
ATOM 17 N3 U B2084 -6.730 179.476 111.129 1.00 13.87 N
ATOM 18 C4 U B2084 -6.998 178.400 110.310 1.00 13.87 C
ATOM 19 O4 U B2084 -8.090 177.833 110.389 1.00 13.87 O
ATOM 20 C5 U B2084 -5.993 178.128 109.335 1.00 13.87 C
ATOM 21 C6 U B2084 -4.932 178.916 109.241 1.00 13.87 C
ATOM 22 P A B2085 0.647 182.560 109.676 1.00 59.97 P
ATOM 23 OP1 A B2085 0.745 183.909 109.087 1.00 57.74 O
ATOM 24 OP2 A B2085 1.389 181.431 109.058 1.00 57.74 O
ATOM 25 O5' A B2085 1.066 182.647 111.197 1.00 13.29 O
TER
Atoms:
OP1: (-12.520,173.821,111.617)
OP2: (-10.401,174.448,110.283)
C3': (-13.345,177.223,114.790)
C1': (-11.103,177.599,115.601)
C5': (-12.139,176.386,112.759)
O4': (-11.128,176.362,114.933)
C8: (-9.459,178.243,113.782)
O2': (-12.879,179.120,116.393)
C6: (-7.510,180.834,115.072)
C5: (-8.368,179.812,114.700)
C4: (-9.296,179.393,115.634)
P: (-11.106,174.282,111.593)
C4': (-12.384,176.195,114.229)
C2': (-12.420,178.322,115.318)
C2: (-8.595,180.858,117.099)
N1: (-7.648,181.350,116.303)
N3: (-9.465,179.887,116.868)
N6: (-6.563,181.322,114.279)
N7: (-8.485,179.086,113.532)
N9: (-9.999,178.373,115.036)
O5': (-10.980,175.668,112.358)
O3': (-14.412,176.644,115.577)
OP2: (-10.401,174.448,110.283)
C3': (-13.345,177.223,114.790)
C1': (-11.103,177.599,115.601)
C5': (-12.139,176.386,112.759)
O4': (-11.128,176.362,114.933)
C8: (-9.459,178.243,113.782)
O2': (-12.879,179.120,116.393)
C6: (-7.510,180.834,115.072)
C5: (-8.368,179.812,114.700)
C4: (-9.296,179.393,115.634)
P: (-11.106,174.282,111.593)
C4': (-12.384,176.195,114.229)
C2': (-12.420,178.322,115.318)
C2: (-8.595,180.858,117.099)
N1: (-7.648,181.350,116.303)
N3: (-9.465,179.887,116.868)
N6: (-6.563,181.322,114.279)
N7: (-8.485,179.086,113.532)
N9: (-9.999,178.373,115.036)
O5': (-10.980,175.668,112.358)
O3': (-14.412,176.644,115.577)
C4: (-6.998,178.400,110.310)
N3: (-6.730,179.476,111.129)
OP1: (-0.866,179.133,104.760)
OP2: (-2.413,177.258,105.609)
C2: (-5.633,180.292,111.072)
C1': (-3.604,180.895,109.859)
C3': (-1.390,181.084,109.045)
O5': (-2.407,179.532,106.675)
O4': (-3.697,181.398,108.554)
C5': (-2.306,180.958,106.628)
P: (-2.186,178.700,105.337)
C4': (-2.376,181.568,108.004)
C2': (-2.244,180.218,109.961)
O2': (-1.796,180.264,111.301)
N1: (-4.742,179.994,110.056)
O4: (-8.090,177.833,110.389)
O2: (-5.458,181.203,111.869)
C6: (-4.932,178.916,109.241)
C5: (-5.993,178.128,109.335)
O3': (-0.907,182.201,109.755)
N3: (-6.730,179.476,111.129)
OP1: (-0.866,179.133,104.760)
OP2: (-2.413,177.258,105.609)
C2: (-5.633,180.292,111.072)
C1': (-3.604,180.895,109.859)
C3': (-1.390,181.084,109.045)
O5': (-2.407,179.532,106.675)
O4': (-3.697,181.398,108.554)
C5': (-2.306,180.958,106.628)
P: (-2.186,178.700,105.337)
C4': (-2.376,181.568,108.004)
C2': (-2.244,180.218,109.961)
O2': (-1.796,180.264,111.301)
N1: (-4.742,179.994,110.056)
O4: (-8.090,177.833,110.389)
O2: (-5.458,181.203,111.869)
C6: (-4.932,178.916,109.241)
C5: (-5.993,178.128,109.335)
O3': (-0.907,182.201,109.755)
Image (generated by PyMOL):