Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A56:A44
Extra
PDB:
ATOM 1 O3' G A 55 6.984 6.099 4.117 1.00 67.87 O
ATOM 2 P U A 56 6.625 5.795 5.641 1.00 71.67 P
ATOM 3 OP1 U A 56 5.171 5.540 5.783 1.00 71.27 O
ATOM 4 OP2 U A 56 7.302 6.796 6.503 1.00 69.37 O
ATOM 5 O5' U A 56 7.383 4.402 5.754 1.00 53.53 O
ATOM 6 C5' U A 56 7.416 3.630 6.940 1.00 45.23 C
ATOM 7 C4' U A 56 7.733 2.240 6.443 1.00 42.88 C
ATOM 8 O4' U A 56 8.988 2.256 5.712 1.00 44.66 O
ATOM 9 C3' U A 56 7.957 1.167 7.476 1.00 41.65 C
ATOM 10 O3' U A 56 6.718 0.797 8.048 1.00 42.27 O
ATOM 11 C2' U A 56 8.485 0.110 6.522 1.00 40.77 C
ATOM 12 O2' U A 56 7.452 -0.366 5.695 1.00 36.97 O
ATOM 13 C1' U A 56 9.468 0.927 5.691 1.00 43.52 C
ATOM 14 N1 U A 56 10.812 0.915 6.284 1.00 44.20 N
ATOM 15 C2 U A 56 11.489 -0.280 6.292 1.00 44.35 C
ATOM 16 O2 U A 56 11.027 -1.304 5.827 1.00 46.35 O
ATOM 17 N3 U A 56 12.733 -0.235 6.864 1.00 45.44 N
ATOM 18 C4 U A 56 13.337 0.877 7.415 1.00 47.44 C
ATOM 19 O4 U A 56 14.457 0.749 7.887 1.00 49.20 O
ATOM 20 C5 U A 56 12.569 2.101 7.375 1.00 46.02 C
ATOM 21 C6 U A 56 11.348 2.073 6.822 1.00 45.35 C
ATOM 22 P G A 57 6.589 0.777 9.647 1.00 51.97 P
ATOM 23 OP1 G A 57 5.244 0.263 9.993 1.00 46.46 O
ATOM 24 OP2 G A 57 7.045 2.092 10.162 1.00 53.55 O
ATOM 25 O5' G A 57 7.673 -0.338 10.050 1.00 43.76 O
TER
ATOM 1 O3' C B 43 23.474 -0.183 14.918 1.00 46.34 O
ATOM 2 P A B 44 24.120 -0.455 13.483 1.00 59.88 P
ATOM 3 OP1 A B 44 25.145 -1.510 13.622 1.00 63.22 O
ATOM 4 OP2 A B 44 24.474 0.868 12.927 1.00 64.74 O
ATOM 5 O5' A B 44 22.918 -1.050 12.604 1.00 57.93 O
ATOM 6 C5' A B 44 22.389 -2.341 12.847 1.00 53.31 C
ATOM 7 C4' A B 44 21.358 -2.687 11.789 1.00 49.56 C
ATOM 8 O4' A B 44 20.216 -1.811 11.940 1.00 50.16 O
ATOM 9 C3' A B 44 21.836 -2.516 10.355 1.00 45.56 C
ATOM 10 O3' A B 44 22.284 -3.774 9.880 1.00 40.22 O
ATOM 11 C2' A B 44 20.573 -2.101 9.615 1.00 46.30 C
ATOM 12 O2' A B 44 19.823 -3.230 9.220 1.00 45.83 O
ATOM 13 C1' A B 44 19.779 -1.359 10.680 1.00 48.26 C
ATOM 14 N9 A B 44 19.905 0.092 10.705 1.00 50.58 N
ATOM 15 C8 A B 44 20.878 0.832 11.313 1.00 50.19 C
ATOM 16 N7 A B 44 20.708 2.126 11.187 1.00 47.84 N
ATOM 17 C5 A B 44 19.538 2.239 10.461 1.00 48.76 C
ATOM 18 C6 A B 44 18.811 3.350 9.996 1.00 50.91 C
ATOM 19 N6 A B 44 19.181 4.615 10.206 1.00 46.92 N
ATOM 20 N1 A B 44 17.684 3.109 9.295 1.00 55.00 N
ATOM 21 C2 A B 44 17.311 1.842 9.083 1.00 53.59 C
ATOM 22 N3 A B 44 17.911 0.719 9.470 1.00 51.01 N
ATOM 23 C4 A B 44 19.028 0.994 10.159 1.00 50.16 C
ATOM 24 P A B 45 23.211 -3.862 8.581 1.00 50.56 P
ATOM 25 OP1 A B 45 23.670 -5.270 8.485 1.00 51.22 O
ATOM 26 OP2 A B 45 24.169 -2.738 8.623 1.00 51.73 O
ATOM 27 O5' A B 45 22.240 -3.559 7.349 1.00 51.11 O
TER
ATOM 2 P U A 56 6.625 5.795 5.641 1.00 71.67 P
ATOM 3 OP1 U A 56 5.171 5.540 5.783 1.00 71.27 O
ATOM 4 OP2 U A 56 7.302 6.796 6.503 1.00 69.37 O
ATOM 5 O5' U A 56 7.383 4.402 5.754 1.00 53.53 O
ATOM 6 C5' U A 56 7.416 3.630 6.940 1.00 45.23 C
ATOM 7 C4' U A 56 7.733 2.240 6.443 1.00 42.88 C
ATOM 8 O4' U A 56 8.988 2.256 5.712 1.00 44.66 O
ATOM 9 C3' U A 56 7.957 1.167 7.476 1.00 41.65 C
ATOM 10 O3' U A 56 6.718 0.797 8.048 1.00 42.27 O
ATOM 11 C2' U A 56 8.485 0.110 6.522 1.00 40.77 C
ATOM 12 O2' U A 56 7.452 -0.366 5.695 1.00 36.97 O
ATOM 13 C1' U A 56 9.468 0.927 5.691 1.00 43.52 C
ATOM 14 N1 U A 56 10.812 0.915 6.284 1.00 44.20 N
ATOM 15 C2 U A 56 11.489 -0.280 6.292 1.00 44.35 C
ATOM 16 O2 U A 56 11.027 -1.304 5.827 1.00 46.35 O
ATOM 17 N3 U A 56 12.733 -0.235 6.864 1.00 45.44 N
ATOM 18 C4 U A 56 13.337 0.877 7.415 1.00 47.44 C
ATOM 19 O4 U A 56 14.457 0.749 7.887 1.00 49.20 O
ATOM 20 C5 U A 56 12.569 2.101 7.375 1.00 46.02 C
ATOM 21 C6 U A 56 11.348 2.073 6.822 1.00 45.35 C
ATOM 22 P G A 57 6.589 0.777 9.647 1.00 51.97 P
ATOM 23 OP1 G A 57 5.244 0.263 9.993 1.00 46.46 O
ATOM 24 OP2 G A 57 7.045 2.092 10.162 1.00 53.55 O
ATOM 25 O5' G A 57 7.673 -0.338 10.050 1.00 43.76 O
TER
ATOM 1 O3' C B 43 23.474 -0.183 14.918 1.00 46.34 O
ATOM 2 P A B 44 24.120 -0.455 13.483 1.00 59.88 P
ATOM 3 OP1 A B 44 25.145 -1.510 13.622 1.00 63.22 O
ATOM 4 OP2 A B 44 24.474 0.868 12.927 1.00 64.74 O
ATOM 5 O5' A B 44 22.918 -1.050 12.604 1.00 57.93 O
ATOM 6 C5' A B 44 22.389 -2.341 12.847 1.00 53.31 C
ATOM 7 C4' A B 44 21.358 -2.687 11.789 1.00 49.56 C
ATOM 8 O4' A B 44 20.216 -1.811 11.940 1.00 50.16 O
ATOM 9 C3' A B 44 21.836 -2.516 10.355 1.00 45.56 C
ATOM 10 O3' A B 44 22.284 -3.774 9.880 1.00 40.22 O
ATOM 11 C2' A B 44 20.573 -2.101 9.615 1.00 46.30 C
ATOM 12 O2' A B 44 19.823 -3.230 9.220 1.00 45.83 O
ATOM 13 C1' A B 44 19.779 -1.359 10.680 1.00 48.26 C
ATOM 14 N9 A B 44 19.905 0.092 10.705 1.00 50.58 N
ATOM 15 C8 A B 44 20.878 0.832 11.313 1.00 50.19 C
ATOM 16 N7 A B 44 20.708 2.126 11.187 1.00 47.84 N
ATOM 17 C5 A B 44 19.538 2.239 10.461 1.00 48.76 C
ATOM 18 C6 A B 44 18.811 3.350 9.996 1.00 50.91 C
ATOM 19 N6 A B 44 19.181 4.615 10.206 1.00 46.92 N
ATOM 20 N1 A B 44 17.684 3.109 9.295 1.00 55.00 N
ATOM 21 C2 A B 44 17.311 1.842 9.083 1.00 53.59 C
ATOM 22 N3 A B 44 17.911 0.719 9.470 1.00 51.01 N
ATOM 23 C4 A B 44 19.028 0.994 10.159 1.00 50.16 C
ATOM 24 P A B 45 23.211 -3.862 8.581 1.00 50.56 P
ATOM 25 OP1 A B 45 23.670 -5.270 8.485 1.00 51.22 O
ATOM 26 OP2 A B 45 24.169 -2.738 8.623 1.00 51.73 O
ATOM 27 O5' A B 45 22.240 -3.559 7.349 1.00 51.11 O
TER
Atoms:
C4: (13.337,0.877,7.415)
N3: (12.733,-0.235,6.864)
OP1: (5.171,5.540,5.783)
OP2: (7.302,6.796,6.503)
C2: (11.489,-0.280,6.292)
C1': (9.468,0.927,5.691)
C3': (7.957,1.167,7.476)
O5': (7.383,4.402,5.754)
O4': (8.988,2.256,5.712)
C5': (7.416,3.630,6.940)
P: (6.625,5.795,5.641)
C4': (7.733,2.240,6.443)
C2': (8.485,0.110,6.522)
O2': (7.452,-0.366,5.695)
N1: (10.812,0.915,6.284)
O4: (14.457,0.749,7.887)
O2: (11.027,-1.304,5.827)
C6: (11.348,2.073,6.822)
C5: (12.569,2.101,7.375)
O3': (6.718,0.797,8.048)
N3: (12.733,-0.235,6.864)
OP1: (5.171,5.540,5.783)
OP2: (7.302,6.796,6.503)
C2: (11.489,-0.280,6.292)
C1': (9.468,0.927,5.691)
C3': (7.957,1.167,7.476)
O5': (7.383,4.402,5.754)
O4': (8.988,2.256,5.712)
C5': (7.416,3.630,6.940)
P: (6.625,5.795,5.641)
C4': (7.733,2.240,6.443)
C2': (8.485,0.110,6.522)
O2': (7.452,-0.366,5.695)
N1: (10.812,0.915,6.284)
O4: (14.457,0.749,7.887)
O2: (11.027,-1.304,5.827)
C6: (11.348,2.073,6.822)
C5: (12.569,2.101,7.375)
O3': (6.718,0.797,8.048)
OP1: (25.145,-1.510,13.622)
OP2: (24.474,0.868,12.927)
C3': (21.836,-2.516,10.355)
C1': (19.779,-1.359,10.680)
C5': (22.389,-2.341,12.847)
O4': (20.216,-1.811,11.940)
C8: (20.878,0.832,11.313)
O2': (19.823,-3.230,9.220)
C6: (18.811,3.350,9.996)
C5: (19.538,2.239,10.461)
C4: (19.028,0.994,10.159)
P: (24.120,-0.455,13.483)
C4': (21.358,-2.687,11.789)
C2': (20.573,-2.101,9.615)
C2: (17.311,1.842,9.083)
N1: (17.684,3.109,9.295)
N3: (17.911,0.719,9.470)
N6: (19.181,4.615,10.206)
N7: (20.708,2.126,11.187)
N9: (19.905,0.092,10.705)
O5': (22.918,-1.050,12.604)
O3': (22.284,-3.774,9.880)
OP2: (24.474,0.868,12.927)
C3': (21.836,-2.516,10.355)
C1': (19.779,-1.359,10.680)
C5': (22.389,-2.341,12.847)
O4': (20.216,-1.811,11.940)
C8: (20.878,0.832,11.313)
O2': (19.823,-3.230,9.220)
C6: (18.811,3.350,9.996)
C5: (19.538,2.239,10.461)
C4: (19.028,0.994,10.159)
P: (24.120,-0.455,13.483)
C4': (21.358,-2.687,11.789)
C2': (20.573,-2.101,9.615)
C2: (17.311,1.842,9.083)
N1: (17.684,3.109,9.295)
N3: (17.911,0.719,9.470)
N6: (19.181,4.615,10.206)
N7: (20.708,2.126,11.187)
N9: (19.905,0.092,10.705)
O5': (22.918,-1.050,12.604)
O3': (22.284,-3.774,9.880)
Image (generated by PyMOL):