ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A1924:A1954

Extra

PDB:
ATOM 1 O3' U A1923 99.958 120.904 111.607 1.00 37.44 O
ATOM 2 P A A1924 99.507 122.335 111.047 1.00 39.08 P
ATOM 3 OP1 A A1924 99.805 123.355 112.084 1.00 40.96 O
ATOM 4 OP2 A A1924 98.119 122.185 110.545 1.00 42.61 O
ATOM 5 O5' A A1924 100.460 122.576 109.798 1.00 37.59 O
ATOM 6 C5' A A1924 101.463 123.599 109.827 1.00 37.79 C
ATOM 7 C4' A A1924 102.051 123.790 108.453 1.00 37.58 C
ATOM 8 O4' A A1924 102.836 122.617 108.105 1.00 36.45 O
ATOM 9 C3' A A1924 101.053 124.004 107.306 1.00 37.79 C
ATOM 10 O3' A A1924 101.596 124.919 106.358 1.00 37.96 O
ATOM 11 C2' A A1924 101.014 122.629 106.653 1.00 38.34 C
ATOM 12 O2' A A1924 100.725 122.615 105.267 1.00 38.78 O
ATOM 13 C1' A A1924 102.460 122.197 106.818 1.00 36.79 C
ATOM 14 N9 A A1924 102.601 120.755 106.698 1.00 36.11 N
ATOM 15 C8 A A1924 101.678 119.766 106.932 1.00 34.93 C
ATOM 16 N7 A A1924 102.105 118.568 106.622 1.00 36.78 N
ATOM 17 C5 A A1924 103.400 118.785 106.170 1.00 35.73 C
ATOM 18 C6 A A1924 104.383 117.926 105.683 1.00 35.57 C
ATOM 19 N6 A A1924 104.208 116.612 105.530 1.00 37.37 N
ATOM 20 N1 A A1924 105.573 118.467 105.345 1.00 36.66 N
ATOM 21 C2 A A1924 105.747 119.787 105.485 1.00 35.69 C
ATOM 22 N3 A A1924 104.897 120.695 105.916 1.00 35.15 N
ATOM 23 C4 A A1924 103.727 120.122 106.244 1.00 35.77 C
ATOM 24 P G A1925 101.028 126.418 106.273 1.00 38.70 P
ATOM 25 OP1 G A1925 102.127 127.224 105.704 1.00 39.64 O
ATOM 26 OP2 G A1925 100.421 126.815 107.573 1.00 38.95 O
ATOM 27 O5' G A1925 99.850 126.354 105.213 1.00 38.65 O
TER

ATOM 1 O3' A B1953 102.662 111.547 102.778 1.00 46.75 O
ATOM 2 P U B1954 104.040 112.217 103.219 1.00 47.18 P
ATOM 3 OP1 U B1954 105.146 111.449 102.571 1.00 46.43 O
ATOM 4 OP2 U B1954 104.038 112.399 104.693 1.00 47.95 O
ATOM 5 O5' U B1954 103.919 113.663 102.579 1.00 46.28 O
ATOM 6 C5' U B1954 104.699 114.027 101.464 1.00 43.55 C
ATOM 7 C4' U B1954 105.260 115.401 101.674 1.00 41.28 C
ATOM 8 O4' U B1954 105.841 115.521 102.993 1.00 41.20 O
ATOM 9 C3' U B1954 106.390 115.695 100.732 1.00 41.14 C
ATOM 10 O3' U B1954 105.866 116.119 99.501 1.00 40.27 O
ATOM 11 C2' U B1954 107.172 116.756 101.476 1.00 42.65 C
ATOM 12 O2' U B1954 106.566 118.029 101.370 1.00 44.26 O
ATOM 13 C1' U B1954 107.059 116.241 102.915 1.00 42.07 C
ATOM 14 N1 U B1954 108.144 115.341 103.356 1.00 42.13 N
ATOM 15 C2 U B1954 109.462 115.759 103.215 1.00 42.11 C
ATOM 16 O2 U B1954 109.773 116.825 102.717 1.00 44.29 O
ATOM 17 N3 U B1954 110.404 114.871 103.677 1.00 41.64 N
ATOM 18 C4 U B1954 110.177 113.638 104.249 1.00 41.31 C
ATOM 19 O4 U B1954 111.134 112.964 104.646 1.00 43.74 O
ATOM 20 C5 U B1954 108.801 113.273 104.346 1.00 42.38 C
ATOM 21 C6 U B1954 107.858 114.110 103.909 1.00 42.07 C
ATOM 22 P G B1955 106.446 115.493 98.158 1.00 41.61 P
ATOM 23 OP1 G B1955 105.723 116.144 97.026 1.00 41.30 O
ATOM 24 OP2 G B1955 106.459 114.017 98.283 1.00 39.81 O
ATOM 25 O5' G B1955 107.949 115.997 98.166 1.00 41.47 O
TER

Atoms:
OP1: (99.805,123.355,112.084)
OP2: (98.119,122.185,110.545)
C3': (101.053,124.004,107.306)
C1': (102.460,122.197,106.818)
C5': (101.463,123.599,109.827)
O4': (102.836,122.617,108.105)
C8: (101.678,119.766,106.932)
O2': (100.725,122.615,105.267)
C6: (104.383,117.926,105.683)
C5: (103.400,118.785,106.170)
C4: (103.727,120.122,106.244)
P: (99.507,122.335,111.047)
C4': (102.051,123.790,108.453)
C2': (101.014,122.629,106.653)
C2: (105.747,119.787,105.485)
N1: (105.573,118.467,105.345)
N3: (104.897,120.695,105.916)
N6: (104.208,116.612,105.530)
N7: (102.105,118.568,106.622)
N9: (102.601,120.755,106.698)
O5': (100.460,122.576,109.798)
O3': (101.596,124.919,106.358)
C4: (110.177,113.638,104.249)
N3: (110.404,114.871,103.677)
OP1: (105.146,111.449,102.571)
OP2: (104.038,112.399,104.693)
C2: (109.462,115.759,103.215)
C1': (107.059,116.241,102.915)
C3': (106.390,115.695,100.732)
O5': (103.919,113.663,102.579)
O4': (105.841,115.521,102.993)
C5': (104.699,114.027,101.464)
P: (104.040,112.217,103.219)
C4': (105.260,115.401,101.674)
C2': (107.172,116.756,101.476)
O2': (106.566,118.029,101.370)
N1: (108.144,115.341,103.356)
O4: (111.134,112.964,104.646)
O2: (109.773,116.825,102.717)
C6: (107.858,114.110,103.909)
C5: (108.801,113.273,104.346)
O3': (105.866,116.119,99.501)
Image (generated by PyMOL):
PyMOL image
show in jmol