Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0281:0347
Extra
PDB:
ATOM 1 O3' G A 280 50.998 127.015 2.239 1.00 60.84 O
ATOM 2 P A A 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 3 OP1 A A 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 4 OP2 A A 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 5 O5' A A 281 50.664 126.673 4.703 1.00 61.26 O
ATOM 6 C5' A A 281 49.431 126.433 5.417 1.00 59.91 C
ATOM 7 C4' A A 281 48.516 125.547 4.603 1.00 59.50 C
ATOM 8 O4' A A 281 49.275 124.442 4.042 1.00 60.69 O
ATOM 9 C3' A A 281 47.395 124.868 5.374 1.00 58.81 C
ATOM 10 O3' A A 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 11 C2' A A 281 47.072 123.679 4.481 1.00 58.91 C
ATOM 12 O2' A A 281 46.298 124.024 3.350 1.00 57.09 O
ATOM 13 C1' A A 281 48.474 123.268 4.029 1.00 59.47 C
ATOM 14 N9 A A 281 49.080 122.300 4.941 1.00 60.05 N
ATOM 15 C8 A A 281 50.252 122.430 5.648 1.00 60.24 C
ATOM 16 N7 A A 281 50.535 121.394 6.397 1.00 60.65 N
ATOM 17 C5 A A 281 49.482 120.519 6.168 1.00 60.33 C
ATOM 18 C6 A A 281 49.195 119.233 6.664 1.00 60.06 C
ATOM 19 N6 A A 281 49.978 118.581 7.530 1.00 58.32 N
ATOM 20 N1 A A 281 48.064 118.633 6.231 1.00 59.81 N
ATOM 21 C2 A A 281 47.283 119.287 5.361 1.00 59.67 C
ATOM 22 N3 A A 281 47.445 120.494 4.825 1.00 59.83 N
ATOM 23 C4 A A 281 48.578 121.064 5.274 1.00 60.16 C
ATOM 24 P C A 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 25 OP1 C A 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 26 OP2 C A 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 27 O5' C A 282 44.419 124.259 6.501 1.00 58.95 O
TER
ATOM 1 O3' G B 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 2 P U B 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U B 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U B 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U B 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U B 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U B 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U B 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U B 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U B 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U B 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U B 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U B 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U B 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U B 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U B 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U B 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U B 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U B 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U B 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U B 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A B 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A B 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A B 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A B 348 56.160 115.860 6.532 1.00 64.60 O
TER
ATOM 2 P A A 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 3 OP1 A A 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 4 OP2 A A 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 5 O5' A A 281 50.664 126.673 4.703 1.00 61.26 O
ATOM 6 C5' A A 281 49.431 126.433 5.417 1.00 59.91 C
ATOM 7 C4' A A 281 48.516 125.547 4.603 1.00 59.50 C
ATOM 8 O4' A A 281 49.275 124.442 4.042 1.00 60.69 O
ATOM 9 C3' A A 281 47.395 124.868 5.374 1.00 58.81 C
ATOM 10 O3' A A 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 11 C2' A A 281 47.072 123.679 4.481 1.00 58.91 C
ATOM 12 O2' A A 281 46.298 124.024 3.350 1.00 57.09 O
ATOM 13 C1' A A 281 48.474 123.268 4.029 1.00 59.47 C
ATOM 14 N9 A A 281 49.080 122.300 4.941 1.00 60.05 N
ATOM 15 C8 A A 281 50.252 122.430 5.648 1.00 60.24 C
ATOM 16 N7 A A 281 50.535 121.394 6.397 1.00 60.65 N
ATOM 17 C5 A A 281 49.482 120.519 6.168 1.00 60.33 C
ATOM 18 C6 A A 281 49.195 119.233 6.664 1.00 60.06 C
ATOM 19 N6 A A 281 49.978 118.581 7.530 1.00 58.32 N
ATOM 20 N1 A A 281 48.064 118.633 6.231 1.00 59.81 N
ATOM 21 C2 A A 281 47.283 119.287 5.361 1.00 59.67 C
ATOM 22 N3 A A 281 47.445 120.494 4.825 1.00 59.83 N
ATOM 23 C4 A A 281 48.578 121.064 5.274 1.00 60.16 C
ATOM 24 P C A 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 25 OP1 C A 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 26 OP2 C A 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 27 O5' C A 282 44.419 124.259 6.501 1.00 58.95 O
TER
ATOM 1 O3' G B 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 2 P U B 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U B 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U B 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U B 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U B 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U B 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U B 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U B 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U B 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U B 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U B 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U B 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U B 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U B 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U B 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U B 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U B 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U B 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U B 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U B 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A B 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A B 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A B 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A B 348 56.160 115.860 6.532 1.00 64.60 O
TER
Atoms:
OP1: (49.484,128.542,3.488)
OP2: (52.021,128.606,3.901)
C3': (47.395,124.868,5.374)
C1': (48.474,123.268,4.029)
C5': (49.431,126.433,5.417)
O4': (49.275,124.442,4.042)
C8: (50.252,122.430,5.648)
O2': (46.298,124.024,3.350)
C6: (49.195,119.233,6.664)
C5: (49.482,120.519,6.168)
C4: (48.578,121.064,5.274)
P: (50.787,127.829,3.609)
C4': (48.516,125.547,4.603)
C2': (47.072,123.679,4.481)
C2: (47.283,119.287,5.361)
N1: (48.064,118.633,6.231)
N3: (47.445,120.494,4.825)
N6: (49.978,118.581,7.530)
N7: (50.535,121.394,6.397)
N9: (49.080,122.300,4.941)
O5': (50.664,126.673,4.703)
O3': (46.278,125.716,5.598)
OP2: (52.021,128.606,3.901)
C3': (47.395,124.868,5.374)
C1': (48.474,123.268,4.029)
C5': (49.431,126.433,5.417)
O4': (49.275,124.442,4.042)
C8: (50.252,122.430,5.648)
O2': (46.298,124.024,3.350)
C6: (49.195,119.233,6.664)
C5: (49.482,120.519,6.168)
C4: (48.578,121.064,5.274)
P: (50.787,127.829,3.609)
C4': (48.516,125.547,4.603)
C2': (47.072,123.679,4.481)
C2: (47.283,119.287,5.361)
N1: (48.064,118.633,6.231)
N3: (47.445,120.494,4.825)
N6: (49.978,118.581,7.530)
N7: (50.535,121.394,6.397)
N9: (49.080,122.300,4.941)
O5': (50.664,126.673,4.703)
O3': (46.278,125.716,5.598)
C4: (53.709,122.638,7.241)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
Image (generated by PyMOL):