ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A744:A791

Extra

PDB:
ATOM 1 O3' G A 743 169.676 98.891 -50.700 1.00 55.08 O
ATOM 2 P A A 744 170.845 98.140 -51.504 1.00 54.53 P
ATOM 3 OP1 A A 744 170.614 98.395 -52.956 1.00 53.31 O
ATOM 4 OP2 A A 744 170.895 96.751 -50.973 1.00 53.89 O
ATOM 5 O5' A A 744 172.146 98.923 -51.069 1.00 53.18 O
ATOM 6 C5' A A 744 172.215 100.333 -51.224 1.00 52.53 C
ATOM 7 C4' A A 744 173.402 100.900 -50.477 1.00 53.87 C
ATOM 8 O4' A A 744 173.128 101.076 -49.062 1.00 53.75 O
ATOM 9 C3' A A 744 174.702 100.124 -50.473 1.00 54.23 C
ATOM 10 O3' A A 744 175.384 100.170 -51.704 1.00 55.99 O
ATOM 11 C2' A A 744 175.470 100.821 -49.351 1.00 53.56 C
ATOM 12 O2' A A 744 176.087 102.035 -49.743 1.00 53.00 O
ATOM 13 C1' A A 744 174.354 101.150 -48.359 1.00 51.67 C
ATOM 14 N9 A A 744 174.352 100.194 -47.257 1.00 48.07 N
ATOM 15 C8 A A 744 173.471 99.190 -46.966 1.00 49.22 C
ATOM 16 N7 A A 744 173.830 98.454 -45.934 1.00 48.47 N
ATOM 17 C5 A A 744 175.021 99.029 -45.518 1.00 46.25 C
ATOM 18 C6 A A 744 175.923 98.702 -44.493 1.00 45.85 C
ATOM 19 N6 A A 744 175.792 97.642 -43.697 1.00 46.14 N
ATOM 20 N1 A A 744 176.996 99.498 -44.325 1.00 46.41 N
ATOM 21 C2 A A 744 177.160 100.533 -45.158 1.00 49.61 C
ATOM 22 N3 A A 744 176.399 100.924 -46.177 1.00 48.80 N
ATOM 23 C4 A A 744 175.334 100.120 -46.303 1.00 46.83 C
ATOM 24 P A A 745 176.131 98.847 -52.231 1.00 58.54 P
ATOM 25 OP1 A A 745 176.812 99.261 -53.499 1.00 61.29 O
ATOM 26 OP2 A A 745 175.195 97.698 -52.226 1.00 56.20 O
ATOM 27 O5' A A 745 177.256 98.578 -51.124 1.00 58.23 O
TER

ATOM 1 O3' C B 790 167.451 91.067 -42.088 1.00 55.61 O
ATOM 2 P U B 791 167.244 92.594 -41.654 1.00 56.12 P
ATOM 3 OP1 U B 791 166.522 92.408 -40.370 1.00 58.42 O
ATOM 4 OP2 U B 791 166.692 93.462 -42.704 1.00 56.73 O
ATOM 5 O5' U B 791 168.683 93.083 -41.333 1.00 56.23 O
ATOM 6 C5' U B 791 169.547 92.307 -40.507 1.00 55.69 C
ATOM 7 C4' U B 791 170.933 92.873 -40.573 1.00 55.23 C
ATOM 8 O4' U B 791 171.347 92.965 -41.964 1.00 55.44 O
ATOM 9 C3' U B 791 171.030 94.298 -40.078 1.00 55.55 C
ATOM 10 O3' U B 791 171.167 94.320 -38.681 1.00 55.15 O
ATOM 11 C2' U B 791 172.265 94.823 -40.792 1.00 55.19 C
ATOM 12 O2' U B 791 173.437 94.393 -40.126 1.00 56.42 O
ATOM 13 C1' U B 791 172.179 94.095 -42.134 1.00 54.82 C
ATOM 14 N1 U B 791 171.685 94.901 -43.261 1.00 53.15 N
ATOM 15 C2 U B 791 172.592 95.739 -43.890 1.00 55.26 C
ATOM 16 O2 U B 791 173.758 95.829 -43.545 1.00 60.65 O
ATOM 17 N3 U B 791 172.094 96.459 -44.947 1.00 52.54 N
ATOM 18 C4 U B 791 170.817 96.419 -45.440 1.00 52.85 C
ATOM 19 O4 U B 791 170.561 97.011 -46.488 1.00 54.93 O
ATOM 20 C5 U B 791 169.933 95.542 -44.734 1.00 53.30 C
ATOM 21 C6 U B 791 170.388 94.830 -43.692 1.00 53.52 C
ATOM 22 P A B 792 170.538 95.541 -37.851 1.00 53.70 P
ATOM 23 OP1 A B 792 169.168 95.790 -38.433 1.00 51.65 O
ATOM 24 OP2 A B 792 170.750 95.200 -36.412 1.00 50.29 O
ATOM 25 O5' A B 792 171.436 96.781 -38.267 1.00 51.06 O
TER

Atoms:
OP1: (170.614,98.395,-52.956)
OP2: (170.895,96.751,-50.973)
C3': (174.702,100.124,-50.473)
C1': (174.354,101.150,-48.359)
C5': (172.215,100.333,-51.224)
O4': (173.128,101.076,-49.062)
C8: (173.471,99.190,-46.966)
O2': (176.087,102.035,-49.743)
C6: (175.923,98.702,-44.493)
C5: (175.021,99.029,-45.518)
C4: (175.334,100.120,-46.303)
P: (170.845,98.140,-51.504)
C4': (173.402,100.900,-50.477)
C2': (175.470,100.821,-49.351)
C2: (177.160,100.533,-45.158)
N1: (176.996,99.498,-44.325)
N3: (176.399,100.924,-46.177)
N6: (175.792,97.642,-43.697)
N7: (173.830,98.454,-45.934)
N9: (174.352,100.194,-47.257)
O5': (172.146,98.923,-51.069)
O3': (175.384,100.170,-51.704)
C4: (170.817,96.419,-45.440)
N3: (172.094,96.459,-44.947)
OP1: (166.522,92.408,-40.370)
OP2: (166.692,93.462,-42.704)
C2: (172.592,95.739,-43.890)
C1': (172.179,94.095,-42.134)
C3': (171.030,94.298,-40.078)
O5': (168.683,93.083,-41.333)
O4': (171.347,92.965,-41.964)
C5': (169.547,92.307,-40.507)
P: (167.244,92.594,-41.654)
C4': (170.933,92.873,-40.573)
C2': (172.265,94.823,-40.792)
O2': (173.437,94.393,-40.126)
N1: (171.685,94.901,-43.261)
O4: (170.561,97.011,-46.488)
O2: (173.758,95.829,-43.545)
C6: (170.388,94.830,-43.692)
C5: (169.933,95.542,-44.734)
O3': (171.167,94.320,-38.681)
Image (generated by PyMOL):
PyMOL image
show in jmol