Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A620:A606
Extra
PDB:
ATOM 1 O3' G A 619 -88.178 -79.097 78.362 1.00 0.01 O
ATOM 2 P A A 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A A 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A A 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A A 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A A 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A A 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A A 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A A 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A A 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A A 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A A 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A A 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A A 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A A 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A A 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A A 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A A 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A A 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A A 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A A 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A A 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A A 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G A 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G A 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G A 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G A 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
ATOM 1 O3' U B 605 -85.429 -87.112 69.151 1.00 0.01 O
ATOM 2 P U B 606 -84.595 -87.833 70.300 1.00 0.01 P
ATOM 3 OP1 U B 606 -83.223 -88.095 69.767 1.00 0.01 O
ATOM 4 OP2 U B 606 -85.408 -88.984 70.769 1.00 0.01 O
ATOM 5 O5' U B 606 -84.532 -86.707 71.405 1.00 0.01 O
ATOM 6 C5' U B 606 -83.439 -85.803 71.438 1.00 0.01 C
ATOM 7 C4' U B 606 -83.805 -84.490 70.819 1.00 0.01 C
ATOM 8 O4' U B 606 -84.823 -83.853 71.623 1.00 0.01 O
ATOM 9 C3' U B 606 -82.715 -83.435 70.751 1.00 0.01 C
ATOM 10 O3' U B 606 -81.793 -83.632 69.719 1.00 0.01 O
ATOM 11 C2' U B 606 -83.535 -82.197 70.564 1.00 0.01 C
ATOM 12 O2' U B 606 -84.107 -82.188 69.264 1.00 0.01 O
ATOM 13 C1' U B 606 -84.635 -82.458 71.584 1.00 0.01 C
ATOM 14 N1 U B 606 -84.232 -81.998 72.927 1.00 0.01 N
ATOM 15 C2 U B 606 -84.414 -80.679 73.228 1.00 0.01 C
ATOM 16 O2 U B 606 -84.930 -79.907 72.467 1.00 0.01 O
ATOM 17 N3 U B 606 -83.996 -80.254 74.449 1.00 0.01 N
ATOM 18 C4 U B 606 -83.404 -81.010 75.408 1.00 0.01 C
ATOM 19 O4 U B 606 -83.100 -80.470 76.461 1.00 0.01 O
ATOM 20 C5 U B 606 -83.220 -82.374 75.034 1.00 0.01 C
ATOM 21 C6 U B 606 -83.627 -82.803 73.833 1.00 0.01 C
ATOM 22 P A B 607 -80.342 -82.990 69.827 1.00 0.01 P
ATOM 23 OP1 A B 607 -79.633 -83.329 68.598 1.00 0.01 O
ATOM 24 OP2 A B 607 -79.772 -83.417 71.110 1.00 0.01 O
ATOM 25 O5' A B 607 -80.624 -81.440 69.842 1.00 0.01 O
TER
ATOM 2 P A A 620 -88.291 -77.718 79.156 1.00 0.01 P
ATOM 3 OP1 A A 620 -88.425 -78.059 80.602 1.00 0.01 O
ATOM 4 OP2 A A 620 -89.374 -76.944 78.490 1.00 0.01 O
ATOM 5 O5' A A 620 -86.889 -76.999 78.919 1.00 0.01 O
ATOM 6 C5' A A 620 -86.642 -75.739 79.536 1.00 0.01 C
ATOM 7 C4' A A 620 -85.796 -74.805 78.684 1.00 0.01 C
ATOM 8 O4' A A 620 -84.714 -75.528 78.075 1.00 0.01 O
ATOM 9 C3' A A 620 -86.458 -74.139 77.488 1.00 0.01 C
ATOM 10 O3' A A 620 -87.319 -73.088 77.815 1.00 0.01 O
ATOM 11 C2' A A 620 -85.264 -73.691 76.706 1.00 0.01 C
ATOM 12 O2' A A 620 -84.645 -72.607 77.348 1.00 0.01 O
ATOM 13 C1' A A 620 -84.370 -74.897 76.862 1.00 0.01 C
ATOM 14 N9 A A 620 -84.557 -75.834 75.751 1.00 0.01 N
ATOM 15 C8 A A 620 -85.100 -77.083 75.660 1.00 0.01 C
ATOM 16 N7 A A 620 -85.047 -77.549 74.432 1.00 0.01 N
ATOM 17 C5 A A 620 -84.426 -76.544 73.693 1.00 0.01 C
ATOM 18 C6 A A 620 -84.067 -76.394 72.341 1.00 0.01 C
ATOM 19 N6 A A 620 -84.267 -77.281 71.378 1.00 0.01 N
ATOM 20 N1 A A 620 -83.465 -75.255 71.986 1.00 0.01 N
ATOM 21 C2 A A 620 -83.235 -74.339 72.926 1.00 0.01 C
ATOM 22 N3 A A 620 -83.540 -74.346 74.198 1.00 0.01 N
ATOM 23 C4 A A 620 -84.133 -75.487 74.510 1.00 0.01 C
ATOM 24 P G A 621 -88.877 -73.291 77.642 1.00 0.01 P
ATOM 25 OP1 G A 621 -89.509 -72.035 78.061 1.00 0.01 O
ATOM 26 OP2 G A 621 -89.225 -74.533 78.362 1.00 0.01 O
ATOM 27 O5' G A 621 -89.053 -73.523 76.067 1.00 0.01 O
TER
ATOM 1 O3' U B 605 -85.429 -87.112 69.151 1.00 0.01 O
ATOM 2 P U B 606 -84.595 -87.833 70.300 1.00 0.01 P
ATOM 3 OP1 U B 606 -83.223 -88.095 69.767 1.00 0.01 O
ATOM 4 OP2 U B 606 -85.408 -88.984 70.769 1.00 0.01 O
ATOM 5 O5' U B 606 -84.532 -86.707 71.405 1.00 0.01 O
ATOM 6 C5' U B 606 -83.439 -85.803 71.438 1.00 0.01 C
ATOM 7 C4' U B 606 -83.805 -84.490 70.819 1.00 0.01 C
ATOM 8 O4' U B 606 -84.823 -83.853 71.623 1.00 0.01 O
ATOM 9 C3' U B 606 -82.715 -83.435 70.751 1.00 0.01 C
ATOM 10 O3' U B 606 -81.793 -83.632 69.719 1.00 0.01 O
ATOM 11 C2' U B 606 -83.535 -82.197 70.564 1.00 0.01 C
ATOM 12 O2' U B 606 -84.107 -82.188 69.264 1.00 0.01 O
ATOM 13 C1' U B 606 -84.635 -82.458 71.584 1.00 0.01 C
ATOM 14 N1 U B 606 -84.232 -81.998 72.927 1.00 0.01 N
ATOM 15 C2 U B 606 -84.414 -80.679 73.228 1.00 0.01 C
ATOM 16 O2 U B 606 -84.930 -79.907 72.467 1.00 0.01 O
ATOM 17 N3 U B 606 -83.996 -80.254 74.449 1.00 0.01 N
ATOM 18 C4 U B 606 -83.404 -81.010 75.408 1.00 0.01 C
ATOM 19 O4 U B 606 -83.100 -80.470 76.461 1.00 0.01 O
ATOM 20 C5 U B 606 -83.220 -82.374 75.034 1.00 0.01 C
ATOM 21 C6 U B 606 -83.627 -82.803 73.833 1.00 0.01 C
ATOM 22 P A B 607 -80.342 -82.990 69.827 1.00 0.01 P
ATOM 23 OP1 A B 607 -79.633 -83.329 68.598 1.00 0.01 O
ATOM 24 OP2 A B 607 -79.772 -83.417 71.110 1.00 0.01 O
ATOM 25 O5' A B 607 -80.624 -81.440 69.842 1.00 0.01 O
TER
Atoms:
OP1: (-88.425,-78.059,80.602)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
OP2: (-89.374,-76.944,78.490)
C3': (-86.458,-74.139,77.488)
C1': (-84.370,-74.897,76.862)
C5': (-86.642,-75.739,79.536)
O4': (-84.714,-75.528,78.075)
C8: (-85.100,-77.083,75.660)
O2': (-84.645,-72.607,77.348)
C6: (-84.067,-76.394,72.341)
C5: (-84.426,-76.544,73.693)
C4: (-84.133,-75.487,74.510)
P: (-88.291,-77.718,79.156)
C4': (-85.796,-74.805,78.684)
C2': (-85.264,-73.691,76.706)
C2: (-83.235,-74.339,72.926)
N1: (-83.465,-75.255,71.986)
N3: (-83.540,-74.346,74.198)
N6: (-84.267,-77.281,71.378)
N7: (-85.047,-77.549,74.432)
N9: (-84.557,-75.834,75.751)
O5': (-86.889,-76.999,78.919)
O3': (-87.319,-73.088,77.815)
C4: (-83.404,-81.010,75.408)
N3: (-83.996,-80.254,74.449)
OP1: (-83.223,-88.095,69.767)
OP2: (-85.408,-88.984,70.769)
C2: (-84.414,-80.679,73.228)
C1': (-84.635,-82.458,71.584)
C3': (-82.715,-83.435,70.751)
O5': (-84.532,-86.707,71.405)
O4': (-84.823,-83.853,71.623)
C5': (-83.439,-85.803,71.438)
P: (-84.595,-87.833,70.300)
C4': (-83.805,-84.490,70.819)
C2': (-83.535,-82.197,70.564)
O2': (-84.107,-82.188,69.264)
N1: (-84.232,-81.998,72.927)
O4: (-83.100,-80.470,76.461)
O2: (-84.930,-79.907,72.467)
C6: (-83.627,-82.803,73.833)
C5: (-83.220,-82.374,75.034)
O3': (-81.793,-83.632,69.719)
N3: (-83.996,-80.254,74.449)
OP1: (-83.223,-88.095,69.767)
OP2: (-85.408,-88.984,70.769)
C2: (-84.414,-80.679,73.228)
C1': (-84.635,-82.458,71.584)
C3': (-82.715,-83.435,70.751)
O5': (-84.532,-86.707,71.405)
O4': (-84.823,-83.853,71.623)
C5': (-83.439,-85.803,71.438)
P: (-84.595,-87.833,70.300)
C4': (-83.805,-84.490,70.819)
C2': (-83.535,-82.197,70.564)
O2': (-84.107,-82.188,69.264)
N1: (-84.232,-81.998,72.927)
O4: (-83.100,-80.470,76.461)
O2: (-84.930,-79.907,72.467)
C6: (-83.627,-82.803,73.833)
C5: (-83.220,-82.374,75.034)
O3': (-81.793,-83.632,69.719)
Image (generated by PyMOL):