Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01218:01055
Extra
PDB:
ATOM 1 O3' G A1217 17.098 103.723 108.605 1.00 36.63 O
ATOM 2 P A A1218 16.458 103.695 107.139 1.00 37.62 P
ATOM 3 OP1 A A1218 16.816 104.981 106.492 1.00 35.92 O
ATOM 4 OP2 A A1218 15.036 103.286 107.216 1.00 38.72 O
ATOM 5 O5' A A1218 17.261 102.535 106.412 1.00 36.33 O
ATOM 6 C5' A A1218 16.839 102.054 105.138 1.00 35.85 C
ATOM 7 C4' A A1218 18.013 101.976 104.205 1.00 35.69 C
ATOM 8 O4' A A1218 19.034 101.134 104.791 1.00 36.27 O
ATOM 9 C3' A A1218 17.706 101.341 102.864 1.00 35.39 C
ATOM 10 O3' A A1218 17.190 102.325 101.975 1.00 33.90 O
ATOM 11 C2' A A1218 19.067 100.810 102.446 1.00 35.38 C
ATOM 12 O2' A A1218 19.895 101.852 101.978 1.00 36.82 O
ATOM 13 C1' A A1218 19.625 100.332 103.788 1.00 35.60 C
ATOM 14 N9 A A1218 19.322 98.941 104.114 1.00 36.25 N
ATOM 15 C8 A A1218 18.249 98.477 104.835 1.00 36.94 C
ATOM 16 N7 A A1218 18.247 97.180 105.005 1.00 37.47 N
ATOM 17 C5 A A1218 19.391 96.755 104.346 1.00 36.78 C
ATOM 18 C6 A A1218 19.953 95.480 104.156 1.00 36.98 C
ATOM 19 N6 A A1218 19.425 94.349 104.650 1.00 35.18 N
ATOM 20 N1 A A1218 21.091 95.402 103.432 1.00 38.09 N
ATOM 21 C2 A A1218 21.621 96.531 102.943 1.00 37.48 C
ATOM 22 N3 A A1218 21.190 97.784 103.061 1.00 37.04 N
ATOM 23 C4 A A1218 20.058 97.829 103.783 1.00 36.67 C
ATOM 24 P G A1219 15.959 101.967 101.011 1.00 34.82 P
ATOM 25 OP1 G A1219 15.256 103.231 100.691 1.00 34.15 O
ATOM 26 OP2 G A1219 15.196 100.843 101.625 1.00 32.76 O
ATOM 27 O5' G A1219 16.673 101.451 99.684 1.00 33.85 O
TER
ATOM 1 O3' U B1054 9.035 94.368 110.079 1.00 39.60 O
ATOM 2 P U B1055 10.204 94.547 111.162 1.00 41.56 P
ATOM 3 OP1 U B1055 9.694 94.024 112.449 1.00 43.35 O
ATOM 4 OP2 U B1055 10.706 95.941 111.084 1.00 42.59 O
ATOM 5 O5' U B1055 11.346 93.561 110.654 1.00 41.16 O
ATOM 6 C5' U B1055 12.730 93.773 110.997 1.00 39.12 C
ATOM 7 C4' U B1055 13.617 93.139 109.952 1.00 39.29 C
ATOM 8 O4' U B1055 13.389 93.769 108.661 1.00 39.97 O
ATOM 9 C3' U B1055 15.109 93.288 110.162 1.00 37.02 C
ATOM 10 O3' U B1055 15.611 92.323 111.065 1.00 35.08 O
ATOM 11 C2' U B1055 15.650 93.074 108.758 1.00 37.83 C
ATOM 12 O2' U B1055 15.672 91.713 108.385 1.00 35.44 O
ATOM 13 C1' U B1055 14.604 93.814 107.926 1.00 39.76 C
ATOM 14 N1 U B1055 14.965 95.225 107.704 1.00 42.96 N
ATOM 15 C2 U B1055 15.957 95.513 106.769 1.00 43.77 C
ATOM 16 O2 U B1055 16.530 94.657 106.113 1.00 44.40 O
ATOM 17 N3 U B1055 16.256 96.845 106.635 1.00 44.62 N
ATOM 18 C4 U B1055 15.690 97.898 107.318 1.00 46.41 C
ATOM 19 O4 U B1055 16.113 99.038 107.128 1.00 49.01 O
ATOM 20 C5 U B1055 14.670 97.527 108.249 1.00 46.12 C
ATOM 21 C6 U B1055 14.349 96.239 108.406 1.00 44.69 C
ATOM 22 P A B1056 17.014 92.580 111.781 1.00 34.69 P
ATOM 23 OP1 A B1056 17.382 91.364 112.546 1.00 35.15 O
ATOM 24 OP2 A B1056 16.909 93.878 112.476 1.00 34.42 O
ATOM 25 O5' A B1056 18.038 92.726 110.572 1.00 36.30 O
TER
ATOM 2 P A A1218 16.458 103.695 107.139 1.00 37.62 P
ATOM 3 OP1 A A1218 16.816 104.981 106.492 1.00 35.92 O
ATOM 4 OP2 A A1218 15.036 103.286 107.216 1.00 38.72 O
ATOM 5 O5' A A1218 17.261 102.535 106.412 1.00 36.33 O
ATOM 6 C5' A A1218 16.839 102.054 105.138 1.00 35.85 C
ATOM 7 C4' A A1218 18.013 101.976 104.205 1.00 35.69 C
ATOM 8 O4' A A1218 19.034 101.134 104.791 1.00 36.27 O
ATOM 9 C3' A A1218 17.706 101.341 102.864 1.00 35.39 C
ATOM 10 O3' A A1218 17.190 102.325 101.975 1.00 33.90 O
ATOM 11 C2' A A1218 19.067 100.810 102.446 1.00 35.38 C
ATOM 12 O2' A A1218 19.895 101.852 101.978 1.00 36.82 O
ATOM 13 C1' A A1218 19.625 100.332 103.788 1.00 35.60 C
ATOM 14 N9 A A1218 19.322 98.941 104.114 1.00 36.25 N
ATOM 15 C8 A A1218 18.249 98.477 104.835 1.00 36.94 C
ATOM 16 N7 A A1218 18.247 97.180 105.005 1.00 37.47 N
ATOM 17 C5 A A1218 19.391 96.755 104.346 1.00 36.78 C
ATOM 18 C6 A A1218 19.953 95.480 104.156 1.00 36.98 C
ATOM 19 N6 A A1218 19.425 94.349 104.650 1.00 35.18 N
ATOM 20 N1 A A1218 21.091 95.402 103.432 1.00 38.09 N
ATOM 21 C2 A A1218 21.621 96.531 102.943 1.00 37.48 C
ATOM 22 N3 A A1218 21.190 97.784 103.061 1.00 37.04 N
ATOM 23 C4 A A1218 20.058 97.829 103.783 1.00 36.67 C
ATOM 24 P G A1219 15.959 101.967 101.011 1.00 34.82 P
ATOM 25 OP1 G A1219 15.256 103.231 100.691 1.00 34.15 O
ATOM 26 OP2 G A1219 15.196 100.843 101.625 1.00 32.76 O
ATOM 27 O5' G A1219 16.673 101.451 99.684 1.00 33.85 O
TER
ATOM 1 O3' U B1054 9.035 94.368 110.079 1.00 39.60 O
ATOM 2 P U B1055 10.204 94.547 111.162 1.00 41.56 P
ATOM 3 OP1 U B1055 9.694 94.024 112.449 1.00 43.35 O
ATOM 4 OP2 U B1055 10.706 95.941 111.084 1.00 42.59 O
ATOM 5 O5' U B1055 11.346 93.561 110.654 1.00 41.16 O
ATOM 6 C5' U B1055 12.730 93.773 110.997 1.00 39.12 C
ATOM 7 C4' U B1055 13.617 93.139 109.952 1.00 39.29 C
ATOM 8 O4' U B1055 13.389 93.769 108.661 1.00 39.97 O
ATOM 9 C3' U B1055 15.109 93.288 110.162 1.00 37.02 C
ATOM 10 O3' U B1055 15.611 92.323 111.065 1.00 35.08 O
ATOM 11 C2' U B1055 15.650 93.074 108.758 1.00 37.83 C
ATOM 12 O2' U B1055 15.672 91.713 108.385 1.00 35.44 O
ATOM 13 C1' U B1055 14.604 93.814 107.926 1.00 39.76 C
ATOM 14 N1 U B1055 14.965 95.225 107.704 1.00 42.96 N
ATOM 15 C2 U B1055 15.957 95.513 106.769 1.00 43.77 C
ATOM 16 O2 U B1055 16.530 94.657 106.113 1.00 44.40 O
ATOM 17 N3 U B1055 16.256 96.845 106.635 1.00 44.62 N
ATOM 18 C4 U B1055 15.690 97.898 107.318 1.00 46.41 C
ATOM 19 O4 U B1055 16.113 99.038 107.128 1.00 49.01 O
ATOM 20 C5 U B1055 14.670 97.527 108.249 1.00 46.12 C
ATOM 21 C6 U B1055 14.349 96.239 108.406 1.00 44.69 C
ATOM 22 P A B1056 17.014 92.580 111.781 1.00 34.69 P
ATOM 23 OP1 A B1056 17.382 91.364 112.546 1.00 35.15 O
ATOM 24 OP2 A B1056 16.909 93.878 112.476 1.00 34.42 O
ATOM 25 O5' A B1056 18.038 92.726 110.572 1.00 36.30 O
TER
Atoms:
OP1: (16.816,104.981,106.492)
OP2: (15.036,103.286,107.216)
C3': (17.706,101.341,102.864)
C1': (19.625,100.332,103.788)
C5': (16.839,102.054,105.138)
O4': (19.034,101.134,104.791)
C8: (18.249,98.477,104.835)
O2': (19.895,101.852,101.978)
C6: (19.953,95.480,104.156)
C5: (19.391,96.755,104.346)
C4: (20.058,97.829,103.783)
P: (16.458,103.695,107.139)
C4': (18.013,101.976,104.205)
C2': (19.067,100.810,102.446)
C2: (21.621,96.531,102.943)
N1: (21.091,95.402,103.432)
N3: (21.190,97.784,103.061)
N6: (19.425,94.349,104.650)
N7: (18.247,97.180,105.005)
N9: (19.322,98.941,104.114)
O5': (17.261,102.535,106.412)
O3': (17.190,102.325,101.975)
OP2: (15.036,103.286,107.216)
C3': (17.706,101.341,102.864)
C1': (19.625,100.332,103.788)
C5': (16.839,102.054,105.138)
O4': (19.034,101.134,104.791)
C8: (18.249,98.477,104.835)
O2': (19.895,101.852,101.978)
C6: (19.953,95.480,104.156)
C5: (19.391,96.755,104.346)
C4: (20.058,97.829,103.783)
P: (16.458,103.695,107.139)
C4': (18.013,101.976,104.205)
C2': (19.067,100.810,102.446)
C2: (21.621,96.531,102.943)
N1: (21.091,95.402,103.432)
N3: (21.190,97.784,103.061)
N6: (19.425,94.349,104.650)
N7: (18.247,97.180,105.005)
N9: (19.322,98.941,104.114)
O5': (17.261,102.535,106.412)
O3': (17.190,102.325,101.975)
C4: (15.690,97.898,107.318)
N3: (16.256,96.845,106.635)
OP1: (9.694,94.024,112.449)
OP2: (10.706,95.941,111.084)
C2: (15.957,95.513,106.769)
C1': (14.604,93.814,107.926)
C3': (15.109,93.288,110.162)
O5': (11.346,93.561,110.654)
O4': (13.389,93.769,108.661)
C5': (12.730,93.773,110.997)
P: (10.204,94.547,111.162)
C4': (13.617,93.139,109.952)
C2': (15.650,93.074,108.758)
O2': (15.672,91.713,108.385)
N1: (14.965,95.225,107.704)
O4: (16.113,99.038,107.128)
O2: (16.530,94.657,106.113)
C6: (14.349,96.239,108.406)
C5: (14.670,97.527,108.249)
O3': (15.611,92.323,111.065)
N3: (16.256,96.845,106.635)
OP1: (9.694,94.024,112.449)
OP2: (10.706,95.941,111.084)
C2: (15.957,95.513,106.769)
C1': (14.604,93.814,107.926)
C3': (15.109,93.288,110.162)
O5': (11.346,93.561,110.654)
O4': (13.389,93.769,108.661)
C5': (12.730,93.773,110.997)
P: (10.204,94.547,111.162)
C4': (13.617,93.139,109.952)
C2': (15.650,93.074,108.758)
O2': (15.672,91.713,108.385)
N1: (14.965,95.225,107.704)
O4: (16.113,99.038,107.128)
O2: (16.530,94.657,106.113)
C6: (14.349,96.239,108.406)
C5: (14.670,97.527,108.249)
O3': (15.611,92.323,111.065)
Image (generated by PyMOL):