Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2570:A2561
Extra
PDB:
ATOM 1 O3' G A2569 59.702 -58.375 153.442 1.00125.00 O
ATOM 2 P A A2570 61.009 -57.835 152.683 1.00121.15 P
ATOM 3 OP1 A A2570 61.637 -58.969 151.963 1.00118.84 O
ATOM 4 OP2 A A2570 61.807 -57.078 153.689 1.00121.99 O
ATOM 5 O5' A A2570 60.409 -56.814 151.610 1.00122.21 O
ATOM 6 C5' A A2570 60.504 -57.062 150.202 1.00119.95 C
ATOM 7 C4' A A2570 59.308 -57.853 149.723 1.00115.68 C
ATOM 8 O4' A A2570 58.102 -57.291 150.299 1.00116.04 O
ATOM 9 C3' A A2570 59.051 -57.822 148.226 1.00114.14 C
ATOM 10 O3' A A2570 59.836 -58.733 147.475 1.00114.19 O
ATOM 11 C2' A A2570 57.563 -58.123 148.137 1.00115.74 C
ATOM 12 O2' A A2570 57.258 -59.499 148.213 1.00115.55 O
ATOM 13 C1' A A2570 57.033 -57.398 149.373 1.00116.33 C
ATOM 14 N9 A A2570 56.578 -56.052 149.015 1.00117.38 N
ATOM 15 C8 A A2570 57.005 -54.832 149.485 1.00119.60 C
ATOM 16 N7 A A2570 56.412 -53.811 148.912 1.00122.66 N
ATOM 17 C5 A A2570 55.530 -54.398 148.011 1.00122.47 C
ATOM 18 C6 A A2570 54.614 -53.855 147.091 1.00122.61 C
ATOM 19 N6 A A2570 54.441 -52.546 146.907 1.00123.39 N
ATOM 20 N1 A A2570 53.878 -54.715 146.352 1.00118.72 N
ATOM 21 C2 A A2570 54.065 -56.026 146.523 1.00116.13 C
ATOM 22 N3 A A2570 54.901 -56.657 147.345 1.00117.12 N
ATOM 23 C4 A A2570 55.613 -55.774 148.073 1.00117.95 C
ATOM 24 P C A2571 60.211 -58.371 145.956 1.00117.73 P
ATOM 25 OP1 C A2571 61.228 -59.325 145.457 1.00107.97 O
ATOM 26 OP2 C A2571 60.509 -56.921 145.949 1.00125.17 O
ATOM 27 O5' C A2571 58.845 -58.588 145.163 1.00111.78 O
TER
ATOM 1 O3' G B2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 2 P U B2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 3 OP1 U B2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 4 OP2 U B2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 5 O5' U B2561 56.913 -46.980 153.290 1.00113.37 O
ATOM 6 C5' U B2561 57.293 -46.093 152.246 1.00119.49 C
ATOM 7 C4' U B2561 56.517 -46.417 151.001 1.00122.32 C
ATOM 8 O4' U B2561 57.303 -47.315 150.189 1.00120.27 O
ATOM 9 C3' U B2561 55.168 -47.074 151.295 1.00125.59 C
ATOM 10 O3' U B2561 54.033 -46.306 150.898 1.00128.93 O
ATOM 11 C2' U B2561 55.193 -48.425 150.587 1.00125.84 C
ATOM 12 O2' U B2561 54.197 -48.514 149.598 1.00123.94 O
ATOM 13 C1' U B2561 56.567 -48.486 149.918 1.00124.26 C
ATOM 14 N1 U B2561 57.336 -49.672 150.337 1.00124.53 N
ATOM 15 C2 U B2561 57.388 -50.757 149.460 1.00120.53 C
ATOM 16 O2 U B2561 56.886 -50.744 148.345 1.00118.11 O
ATOM 17 N3 U B2561 58.048 -51.859 149.939 1.00121.23 N
ATOM 18 C4 U B2561 58.644 -52.006 151.174 1.00127.38 C
ATOM 19 O4 U B2561 59.007 -53.131 151.535 1.00131.04 O
ATOM 20 C5 U B2561 58.594 -50.837 152.002 1.00126.77 C
ATOM 21 C6 U B2561 57.958 -49.738 151.569 1.00126.25 C
ATOM 22 P A B2562 52.609 -46.554 151.617 1.00130.71 P
ATOM 23 OP1 A B2562 51.769 -45.344 151.413 1.00125.96 O
ATOM 24 OP2 A B2562 52.871 -47.041 153.001 1.00121.27 O
ATOM 25 O5' A B2562 51.952 -47.761 150.803 1.00128.59 O
TER
ATOM 2 P A A2570 61.009 -57.835 152.683 1.00121.15 P
ATOM 3 OP1 A A2570 61.637 -58.969 151.963 1.00118.84 O
ATOM 4 OP2 A A2570 61.807 -57.078 153.689 1.00121.99 O
ATOM 5 O5' A A2570 60.409 -56.814 151.610 1.00122.21 O
ATOM 6 C5' A A2570 60.504 -57.062 150.202 1.00119.95 C
ATOM 7 C4' A A2570 59.308 -57.853 149.723 1.00115.68 C
ATOM 8 O4' A A2570 58.102 -57.291 150.299 1.00116.04 O
ATOM 9 C3' A A2570 59.051 -57.822 148.226 1.00114.14 C
ATOM 10 O3' A A2570 59.836 -58.733 147.475 1.00114.19 O
ATOM 11 C2' A A2570 57.563 -58.123 148.137 1.00115.74 C
ATOM 12 O2' A A2570 57.258 -59.499 148.213 1.00115.55 O
ATOM 13 C1' A A2570 57.033 -57.398 149.373 1.00116.33 C
ATOM 14 N9 A A2570 56.578 -56.052 149.015 1.00117.38 N
ATOM 15 C8 A A2570 57.005 -54.832 149.485 1.00119.60 C
ATOM 16 N7 A A2570 56.412 -53.811 148.912 1.00122.66 N
ATOM 17 C5 A A2570 55.530 -54.398 148.011 1.00122.47 C
ATOM 18 C6 A A2570 54.614 -53.855 147.091 1.00122.61 C
ATOM 19 N6 A A2570 54.441 -52.546 146.907 1.00123.39 N
ATOM 20 N1 A A2570 53.878 -54.715 146.352 1.00118.72 N
ATOM 21 C2 A A2570 54.065 -56.026 146.523 1.00116.13 C
ATOM 22 N3 A A2570 54.901 -56.657 147.345 1.00117.12 N
ATOM 23 C4 A A2570 55.613 -55.774 148.073 1.00117.95 C
ATOM 24 P C A2571 60.211 -58.371 145.956 1.00117.73 P
ATOM 25 OP1 C A2571 61.228 -59.325 145.457 1.00107.97 O
ATOM 26 OP2 C A2571 60.509 -56.921 145.949 1.00125.17 O
ATOM 27 O5' C A2571 58.845 -58.588 145.163 1.00111.78 O
TER
ATOM 1 O3' G B2560 59.154 -47.342 154.324 1.00133.40 O
ATOM 2 P U B2561 57.640 -46.944 154.698 1.00119.91 P
ATOM 3 OP1 U B2561 57.614 -45.553 155.224 1.00123.89 O
ATOM 4 OP2 U B2561 57.035 -48.037 155.501 1.00128.09 O
ATOM 5 O5' U B2561 56.913 -46.980 153.290 1.00113.37 O
ATOM 6 C5' U B2561 57.293 -46.093 152.246 1.00119.49 C
ATOM 7 C4' U B2561 56.517 -46.417 151.001 1.00122.32 C
ATOM 8 O4' U B2561 57.303 -47.315 150.189 1.00120.27 O
ATOM 9 C3' U B2561 55.168 -47.074 151.295 1.00125.59 C
ATOM 10 O3' U B2561 54.033 -46.306 150.898 1.00128.93 O
ATOM 11 C2' U B2561 55.193 -48.425 150.587 1.00125.84 C
ATOM 12 O2' U B2561 54.197 -48.514 149.598 1.00123.94 O
ATOM 13 C1' U B2561 56.567 -48.486 149.918 1.00124.26 C
ATOM 14 N1 U B2561 57.336 -49.672 150.337 1.00124.53 N
ATOM 15 C2 U B2561 57.388 -50.757 149.460 1.00120.53 C
ATOM 16 O2 U B2561 56.886 -50.744 148.345 1.00118.11 O
ATOM 17 N3 U B2561 58.048 -51.859 149.939 1.00121.23 N
ATOM 18 C4 U B2561 58.644 -52.006 151.174 1.00127.38 C
ATOM 19 O4 U B2561 59.007 -53.131 151.535 1.00131.04 O
ATOM 20 C5 U B2561 58.594 -50.837 152.002 1.00126.77 C
ATOM 21 C6 U B2561 57.958 -49.738 151.569 1.00126.25 C
ATOM 22 P A B2562 52.609 -46.554 151.617 1.00130.71 P
ATOM 23 OP1 A B2562 51.769 -45.344 151.413 1.00125.96 O
ATOM 24 OP2 A B2562 52.871 -47.041 153.001 1.00121.27 O
ATOM 25 O5' A B2562 51.952 -47.761 150.803 1.00128.59 O
TER
Atoms:
OP1: (61.637,-58.969,151.963)
OP2: (61.807,-57.078,153.689)
C3': (59.051,-57.822,148.226)
C1': (57.033,-57.398,149.373)
C5': (60.504,-57.062,150.202)
O4': (58.102,-57.291,150.299)
C8: (57.005,-54.832,149.485)
O2': (57.258,-59.499,148.213)
C6: (54.614,-53.855,147.091)
C5: (55.530,-54.398,148.011)
C4: (55.613,-55.774,148.073)
P: (61.009,-57.835,152.683)
C4': (59.308,-57.853,149.723)
C2': (57.563,-58.123,148.137)
C2: (54.065,-56.026,146.523)
N1: (53.878,-54.715,146.352)
N3: (54.901,-56.657,147.345)
N6: (54.441,-52.546,146.907)
N7: (56.412,-53.811,148.912)
N9: (56.578,-56.052,149.015)
O5': (60.409,-56.814,151.610)
O3': (59.836,-58.733,147.475)
OP2: (61.807,-57.078,153.689)
C3': (59.051,-57.822,148.226)
C1': (57.033,-57.398,149.373)
C5': (60.504,-57.062,150.202)
O4': (58.102,-57.291,150.299)
C8: (57.005,-54.832,149.485)
O2': (57.258,-59.499,148.213)
C6: (54.614,-53.855,147.091)
C5: (55.530,-54.398,148.011)
C4: (55.613,-55.774,148.073)
P: (61.009,-57.835,152.683)
C4': (59.308,-57.853,149.723)
C2': (57.563,-58.123,148.137)
C2: (54.065,-56.026,146.523)
N1: (53.878,-54.715,146.352)
N3: (54.901,-56.657,147.345)
N6: (54.441,-52.546,146.907)
N7: (56.412,-53.811,148.912)
N9: (56.578,-56.052,149.015)
O5': (60.409,-56.814,151.610)
O3': (59.836,-58.733,147.475)
C4: (58.644,-52.006,151.174)
N3: (58.048,-51.859,149.939)
OP1: (57.614,-45.553,155.224)
OP2: (57.035,-48.037,155.501)
C2: (57.388,-50.757,149.460)
C1': (56.567,-48.486,149.918)
C3': (55.168,-47.074,151.295)
O5': (56.913,-46.980,153.290)
O4': (57.303,-47.315,150.189)
C5': (57.293,-46.093,152.246)
P: (57.640,-46.944,154.698)
C4': (56.517,-46.417,151.001)
C2': (55.193,-48.425,150.587)
O2': (54.197,-48.514,149.598)
N1: (57.336,-49.672,150.337)
O4: (59.007,-53.131,151.535)
O2: (56.886,-50.744,148.345)
C6: (57.958,-49.738,151.569)
C5: (58.594,-50.837,152.002)
O3': (54.033,-46.306,150.898)
N3: (58.048,-51.859,149.939)
OP1: (57.614,-45.553,155.224)
OP2: (57.035,-48.037,155.501)
C2: (57.388,-50.757,149.460)
C1': (56.567,-48.486,149.918)
C3': (55.168,-47.074,151.295)
O5': (56.913,-46.980,153.290)
O4': (57.303,-47.315,150.189)
C5': (57.293,-46.093,152.246)
P: (57.640,-46.944,154.698)
C4': (56.517,-46.417,151.001)
C2': (55.193,-48.425,150.587)
O2': (54.197,-48.514,149.598)
N1: (57.336,-49.672,150.337)
O4: (59.007,-53.131,151.535)
O2: (56.886,-50.744,148.345)
C6: (57.958,-49.738,151.569)
C5: (58.594,-50.837,152.002)
O3': (54.033,-46.306,150.898)
Image (generated by PyMOL):