Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A13:A7
Extra
PDB:
ATOM 1 O3' C A 12 15.937 6.523 -0.436 1.00 34.16 O
ATOM 2 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 3 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 4 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 5 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
ATOM 6 C5' A A 13 18.937 5.608 -0.455 1.00 32.44 C
ATOM 7 C4' A A 13 19.938 4.768 0.298 1.00 30.45 C
ATOM 8 O4' A A 13 19.337 4.156 1.443 1.00 28.49 O
ATOM 9 C3' A A 13 20.595 3.561 -0.337 1.00 29.60 C
ATOM 10 O3' A A 13 21.570 3.924 -1.298 1.00 30.67 O
ATOM 11 C2' A A 13 21.291 2.959 0.884 1.00 28.28 C
ATOM 12 O2' A A 13 22.463 3.619 1.346 1.00 30.57 O
ATOM 13 C1' A A 13 20.247 3.202 1.957 1.00 26.06 C
ATOM 14 N9 A A 13 19.545 1.968 2.192 1.00 23.51 N
ATOM 15 C8 A A 13 18.262 1.605 1.864 1.00 22.47 C
ATOM 16 N7 A A 13 17.954 0.396 2.238 1.00 22.90 N
ATOM 17 C5 A A 13 19.111 -0.067 2.854 1.00 22.61 C
ATOM 18 C6 A A 13 19.439 -1.281 3.451 1.00 21.89 C
ATOM 19 N6 A A 13 18.561 -2.276 3.615 1.00 24.37 N
ATOM 20 N1 A A 13 20.707 -1.442 3.903 1.00 21.94 N
ATOM 21 C2 A A 13 21.559 -0.423 3.810 1.00 20.09 C
ATOM 22 N3 A A 13 21.352 0.789 3.307 1.00 23.63 N
ATOM 23 C4 A A 13 20.097 0.893 2.825 1.00 23.57 C
ATOM 24 P G A 14 21.768 3.016 -2.601 1.00 27.75 P
ATOM 25 OP1 G A 14 22.908 3.644 -3.341 1.00 30.01 O
ATOM 26 OP2 G A 14 20.461 2.861 -3.259 1.00 28.07 O
ATOM 27 O5' G A 14 22.208 1.612 -2.011 1.00 26.43 O
TER
ATOM 1 O3' U B 6 8.568 -1.716 -1.317 1.00 29.86 O
ATOM 2 P U B 7 8.910 -1.171 0.175 1.00 29.64 P
ATOM 3 OP1 U B 7 7.815 -1.657 1.044 1.00 26.35 O
ATOM 4 OP2 U B 7 9.222 0.268 0.084 1.00 28.99 O
ATOM 5 O5' U B 7 10.209 -1.982 0.526 1.00 29.68 O
ATOM 6 C5' U B 7 10.111 -3.375 0.663 1.00 29.30 C
ATOM 7 C4' U B 7 11.188 -3.862 1.572 1.00 29.58 C
ATOM 8 O4' U B 7 12.454 -3.582 0.930 1.00 29.55 O
ATOM 9 C3' U B 7 11.321 -3.145 2.905 1.00 29.37 C
ATOM 10 O3' U B 7 10.387 -3.505 3.936 1.00 33.14 O
ATOM 11 C2' U B 7 12.757 -3.480 3.264 1.00 29.01 C
ATOM 12 O2' U B 7 12.894 -4.815 3.707 1.00 27.22 O
ATOM 13 C1' U B 7 13.430 -3.306 1.910 1.00 27.11 C
ATOM 14 N1 U B 7 13.880 -1.930 1.693 1.00 27.94 N
ATOM 15 C2 U B 7 15.079 -1.549 2.255 1.00 26.96 C
ATOM 16 O2 U B 7 15.744 -2.276 2.970 1.00 30.58 O
ATOM 17 N3 U B 7 15.468 -0.282 1.969 1.00 25.19 N
ATOM 18 C4 U B 7 14.794 0.636 1.235 1.00 24.48 C
ATOM 19 O4 U B 7 15.252 1.760 1.143 1.00 26.21 O
ATOM 20 C5 U B 7 13.551 0.190 0.708 1.00 26.03 C
ATOM 21 C6 U B 7 13.145 -1.052 0.947 1.00 26.65 C
ATOM 22 P A B 8 9.877 -2.352 4.991 1.00 24.19 P
ATOM 23 OP1 A B 8 8.406 -2.439 5.189 1.00 28.19 O
ATOM 24 OP2 A B 8 10.468 -1.046 4.578 1.00 24.97 O
ATOM 25 O5' A B 8 10.492 -2.758 6.406 1.00 25.32 O
TER
ATOM 2 P A A 13 16.592 5.584 -1.570 1.00 36.45 P
ATOM 3 OP1 A A 13 17.153 6.512 -2.597 1.00 36.66 O
ATOM 4 OP2 A A 13 15.604 4.511 -1.982 1.00 36.85 O
ATOM 5 O5' A A 13 17.806 4.860 -0.823 1.00 35.55 O
ATOM 6 C5' A A 13 18.937 5.608 -0.455 1.00 32.44 C
ATOM 7 C4' A A 13 19.938 4.768 0.298 1.00 30.45 C
ATOM 8 O4' A A 13 19.337 4.156 1.443 1.00 28.49 O
ATOM 9 C3' A A 13 20.595 3.561 -0.337 1.00 29.60 C
ATOM 10 O3' A A 13 21.570 3.924 -1.298 1.00 30.67 O
ATOM 11 C2' A A 13 21.291 2.959 0.884 1.00 28.28 C
ATOM 12 O2' A A 13 22.463 3.619 1.346 1.00 30.57 O
ATOM 13 C1' A A 13 20.247 3.202 1.957 1.00 26.06 C
ATOM 14 N9 A A 13 19.545 1.968 2.192 1.00 23.51 N
ATOM 15 C8 A A 13 18.262 1.605 1.864 1.00 22.47 C
ATOM 16 N7 A A 13 17.954 0.396 2.238 1.00 22.90 N
ATOM 17 C5 A A 13 19.111 -0.067 2.854 1.00 22.61 C
ATOM 18 C6 A A 13 19.439 -1.281 3.451 1.00 21.89 C
ATOM 19 N6 A A 13 18.561 -2.276 3.615 1.00 24.37 N
ATOM 20 N1 A A 13 20.707 -1.442 3.903 1.00 21.94 N
ATOM 21 C2 A A 13 21.559 -0.423 3.810 1.00 20.09 C
ATOM 22 N3 A A 13 21.352 0.789 3.307 1.00 23.63 N
ATOM 23 C4 A A 13 20.097 0.893 2.825 1.00 23.57 C
ATOM 24 P G A 14 21.768 3.016 -2.601 1.00 27.75 P
ATOM 25 OP1 G A 14 22.908 3.644 -3.341 1.00 30.01 O
ATOM 26 OP2 G A 14 20.461 2.861 -3.259 1.00 28.07 O
ATOM 27 O5' G A 14 22.208 1.612 -2.011 1.00 26.43 O
TER
ATOM 1 O3' U B 6 8.568 -1.716 -1.317 1.00 29.86 O
ATOM 2 P U B 7 8.910 -1.171 0.175 1.00 29.64 P
ATOM 3 OP1 U B 7 7.815 -1.657 1.044 1.00 26.35 O
ATOM 4 OP2 U B 7 9.222 0.268 0.084 1.00 28.99 O
ATOM 5 O5' U B 7 10.209 -1.982 0.526 1.00 29.68 O
ATOM 6 C5' U B 7 10.111 -3.375 0.663 1.00 29.30 C
ATOM 7 C4' U B 7 11.188 -3.862 1.572 1.00 29.58 C
ATOM 8 O4' U B 7 12.454 -3.582 0.930 1.00 29.55 O
ATOM 9 C3' U B 7 11.321 -3.145 2.905 1.00 29.37 C
ATOM 10 O3' U B 7 10.387 -3.505 3.936 1.00 33.14 O
ATOM 11 C2' U B 7 12.757 -3.480 3.264 1.00 29.01 C
ATOM 12 O2' U B 7 12.894 -4.815 3.707 1.00 27.22 O
ATOM 13 C1' U B 7 13.430 -3.306 1.910 1.00 27.11 C
ATOM 14 N1 U B 7 13.880 -1.930 1.693 1.00 27.94 N
ATOM 15 C2 U B 7 15.079 -1.549 2.255 1.00 26.96 C
ATOM 16 O2 U B 7 15.744 -2.276 2.970 1.00 30.58 O
ATOM 17 N3 U B 7 15.468 -0.282 1.969 1.00 25.19 N
ATOM 18 C4 U B 7 14.794 0.636 1.235 1.00 24.48 C
ATOM 19 O4 U B 7 15.252 1.760 1.143 1.00 26.21 O
ATOM 20 C5 U B 7 13.551 0.190 0.708 1.00 26.03 C
ATOM 21 C6 U B 7 13.145 -1.052 0.947 1.00 26.65 C
ATOM 22 P A B 8 9.877 -2.352 4.991 1.00 24.19 P
ATOM 23 OP1 A B 8 8.406 -2.439 5.189 1.00 28.19 O
ATOM 24 OP2 A B 8 10.468 -1.046 4.578 1.00 24.97 O
ATOM 25 O5' A B 8 10.492 -2.758 6.406 1.00 25.32 O
TER
Atoms:
OP1: (17.153,6.512,-2.597)
OP2: (15.604,4.511,-1.982)
C3': (20.595,3.561,-0.337)
C1': (20.247,3.202,1.957)
C5': (18.937,5.608,-0.455)
O4': (19.337,4.156,1.443)
C8: (18.262,1.605,1.864)
O2': (22.463,3.619,1.346)
C6: (19.439,-1.281,3.451)
C5: (19.111,-0.067,2.854)
C4: (20.097,0.893,2.825)
P: (16.592,5.584,-1.570)
C4': (19.938,4.768,0.298)
C2': (21.291,2.959,0.884)
C2: (21.559,-0.423,3.810)
N1: (20.707,-1.442,3.903)
N3: (21.352,0.789,3.307)
N6: (18.561,-2.276,3.615)
N7: (17.954,0.396,2.238)
N9: (19.545,1.968,2.192)
O5': (17.806,4.860,-0.823)
O3': (21.570,3.924,-1.298)
OP2: (15.604,4.511,-1.982)
C3': (20.595,3.561,-0.337)
C1': (20.247,3.202,1.957)
C5': (18.937,5.608,-0.455)
O4': (19.337,4.156,1.443)
C8: (18.262,1.605,1.864)
O2': (22.463,3.619,1.346)
C6: (19.439,-1.281,3.451)
C5: (19.111,-0.067,2.854)
C4: (20.097,0.893,2.825)
P: (16.592,5.584,-1.570)
C4': (19.938,4.768,0.298)
C2': (21.291,2.959,0.884)
C2: (21.559,-0.423,3.810)
N1: (20.707,-1.442,3.903)
N3: (21.352,0.789,3.307)
N6: (18.561,-2.276,3.615)
N7: (17.954,0.396,2.238)
N9: (19.545,1.968,2.192)
O5': (17.806,4.860,-0.823)
O3': (21.570,3.924,-1.298)
C4: (14.794,0.636,1.235)
N3: (15.468,-0.282,1.969)
OP1: (7.815,-1.657,1.044)
OP2: (9.222,0.268,0.084)
C2: (15.079,-1.549,2.255)
C1': (13.430,-3.306,1.910)
C3': (11.321,-3.145,2.905)
O5': (10.209,-1.982,0.526)
O4': (12.454,-3.582,0.930)
C5': (10.111,-3.375,0.663)
P: (8.910,-1.171,0.175)
C4': (11.188,-3.862,1.572)
C2': (12.757,-3.480,3.264)
O2': (12.894,-4.815,3.707)
N1: (13.880,-1.930,1.693)
O4: (15.252,1.760,1.143)
O2: (15.744,-2.276,2.970)
C6: (13.145,-1.052,0.947)
C5: (13.551,0.190,0.708)
O3': (10.387,-3.505,3.936)
N3: (15.468,-0.282,1.969)
OP1: (7.815,-1.657,1.044)
OP2: (9.222,0.268,0.084)
C2: (15.079,-1.549,2.255)
C1': (13.430,-3.306,1.910)
C3': (11.321,-3.145,2.905)
O5': (10.209,-1.982,0.526)
O4': (12.454,-3.582,0.930)
C5': (10.111,-3.375,0.663)
P: (8.910,-1.171,0.175)
C4': (11.188,-3.862,1.572)
C2': (12.757,-3.480,3.264)
O2': (12.894,-4.815,3.707)
N1: (13.880,-1.930,1.693)
O4: (15.252,1.760,1.143)
O2: (15.744,-2.276,2.970)
C6: (13.145,-1.052,0.947)
C5: (13.551,0.190,0.708)
O3': (10.387,-3.505,3.936)
Image (generated by PyMOL):