ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1922:A1923

Extra

PDB:
ATOM 1 O3' C A1921 111.033 124.776 108.141 1.00 60.71 O
ATOM 2 P G A1922 110.580 124.656 109.684 1.00 60.86 P
ATOM 3 OP1 G A1922 109.833 125.899 110.036 1.00 61.13 O
ATOM 4 OP2 G A1922 111.759 124.265 110.486 1.00 61.05 O
ATOM 5 O5' G A1922 109.570 123.415 109.753 1.00 59.29 O
ATOM 6 C5' G A1922 108.365 123.374 108.966 1.00 57.74 C
ATOM 7 C4' G A1922 107.685 122.022 109.058 1.00 56.54 C
ATOM 8 O4' G A1922 108.565 120.976 108.568 1.00 57.86 O
ATOM 9 C3' G A1922 107.197 121.525 110.403 1.00 55.35 C
ATOM 10 O3' G A1922 105.948 122.124 110.765 1.00 52.97 O
ATOM 11 C2' G A1922 107.076 120.020 110.154 1.00 57.23 C
ATOM 12 O2' G A1922 105.891 119.652 109.478 1.00 57.13 O
ATOM 13 C1' G A1922 108.243 119.747 109.201 1.00 59.78 C
ATOM 14 N9 G A1922 109.438 119.236 109.876 1.00 62.81 N
ATOM 15 C8 G A1922 110.617 119.911 110.049 1.00 62.83 C
ATOM 16 N7 G A1922 111.509 119.235 110.715 1.00 62.55 N
ATOM 17 C5 G A1922 110.889 118.034 111.003 1.00 64.30 C
ATOM 18 C6 G A1922 111.365 116.912 111.729 1.00 66.26 C
ATOM 19 O6 G A1922 112.452 116.765 112.305 1.00 67.25 O
ATOM 20 N1 G A1922 110.422 115.895 111.767 1.00 67.49 N
ATOM 21 C2 G A1922 109.175 115.950 111.197 1.00 67.53 C
ATOM 22 N2 G A1922 108.412 114.849 111.336 1.00 68.53 N
ATOM 23 N3 G A1922 108.708 117.001 110.537 1.00 66.82 N
ATOM 24 C4 G A1922 109.613 118.003 110.479 1.00 64.15 C
ATOM 25 P U A1923 105.406 122.009 112.282 1.00 51.53 P
ATOM 26 OP1 U A1923 104.523 123.157 112.565 1.00 51.75 O
ATOM 27 OP2 U A1923 106.545 121.719 113.193 1.00 51.66 O
ATOM 28 O5' U A1923 104.476 120.724 112.248 1.00 52.69 O
TER

ATOM 1 O3' G B1922 105.948 122.124 110.765 1.00 52.97 O
ATOM 2 P U B1923 105.406 122.009 112.282 1.00 51.53 P
ATOM 3 OP1 U B1923 104.523 123.157 112.565 1.00 51.75 O
ATOM 4 OP2 U B1923 106.545 121.719 113.193 1.00 51.66 O
ATOM 5 O5' U B1923 104.476 120.724 112.248 1.00 52.69 O
ATOM 6 C5' U B1923 103.621 120.475 111.128 1.00 52.25 C
ATOM 7 C4' U B1923 102.208 120.248 111.588 1.00 52.51 C
ATOM 8 O4' U B1923 102.121 118.943 112.225 1.00 53.81 O
ATOM 9 C3' U B1923 101.640 121.272 112.570 1.00 51.66 C
ATOM 10 O3' U B1923 100.291 121.573 112.204 1.00 52.77 O
ATOM 11 C2' U B1923 101.695 120.513 113.901 1.00 52.05 C
ATOM 12 O2' U B1923 100.698 120.844 114.832 1.00 52.33 O
ATOM 13 C1' U B1923 101.462 119.071 113.465 1.00 53.44 C
ATOM 14 N1 U B1923 101.961 118.055 114.413 1.00 55.78 N
ATOM 15 C2 U B1923 101.015 117.284 115.101 1.00 56.56 C
ATOM 16 O2 U B1923 99.818 117.431 114.976 1.00 56.59 O
ATOM 17 N3 U B1923 101.531 116.333 115.945 1.00 57.86 N
ATOM 18 C4 U B1923 102.859 116.068 116.178 1.00 58.69 C
ATOM 19 O4 U B1923 103.162 115.087 116.863 1.00 60.78 O
ATOM 20 C5 U B1923 103.776 116.918 115.462 1.00 57.72 C
ATOM 21 C6 U B1923 103.309 117.853 114.625 1.00 56.47 C
ATOM 22 P A B1924 99.897 123.031 111.614 1.00 52.19 P
ATOM 23 OP1 A B1924 100.195 124.077 112.638 1.00 52.69 O
ATOM 24 OP2 A B1924 98.506 122.846 111.158 1.00 52.89 O
ATOM 25 O5' A B1924 100.807 123.219 110.318 1.00 49.69 O
TER

Atoms:
OP1: (109.833,125.899,110.036)
OP2: (111.759,124.265,110.486)
C3': (107.197,121.525,110.403)
C1': (108.243,119.747,109.201)
C5': (108.365,123.374,108.966)
O6: (112.452,116.765,112.305)
O4': (108.565,120.976,108.568)
C8: (110.617,119.911,110.049)
C2: (109.175,115.950,111.197)
C6: (111.365,116.912,111.729)
C5: (110.889,118.034,111.003)
C4: (109.613,118.003,110.479)
P: (110.580,124.656,109.684)
C4': (107.685,122.022,109.058)
C2': (107.076,120.020,110.154)
O2': (105.891,119.652,109.478)
N1: (110.422,115.895,111.767)
N2: (108.412,114.849,111.336)
N3: (108.708,117.001,110.537)
N7: (111.509,119.235,110.715)
N9: (109.438,119.236,109.876)
O5': (109.570,123.415,109.753)
O3': (105.948,122.124,110.765)
C4: (102.859,116.068,116.178)
N3: (101.531,116.333,115.945)
OP1: (104.523,123.157,112.565)
OP2: (106.545,121.719,113.193)
C2: (101.015,117.284,115.101)
C1': (101.462,119.071,113.465)
C3': (101.640,121.272,112.570)
O5': (104.476,120.724,112.248)
O4': (102.121,118.943,112.225)
C5': (103.621,120.475,111.128)
P: (105.406,122.009,112.282)
C4': (102.208,120.248,111.588)
C2': (101.695,120.513,113.901)
O2': (100.698,120.844,114.832)
N1: (101.961,118.055,114.413)
O4: (103.162,115.087,116.863)
O2: (99.818,117.431,114.976)
C6: (103.309,117.853,114.625)
C5: (103.776,116.918,115.462)
O3': (100.291,121.573,112.204)
Image (generated by PyMOL):
PyMOL image
show in jmol