ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01922:01923

Extra

PDB:
ATOM 1 O3' C A1921 111.076 123.650 107.437 1.00 68.96 O
ATOM 2 P G A1922 110.666 123.480 108.986 1.00 68.90 P
ATOM 3 OP1 G A1922 109.951 124.726 109.378 1.00 69.73 O
ATOM 4 OP2 G A1922 111.874 123.049 109.747 1.00 69.65 O
ATOM 5 O5' G A1922 109.623 122.275 109.000 1.00 67.03 O
ATOM 6 C5' G A1922 108.385 122.365 108.276 1.00 66.92 C
ATOM 7 C4' G A1922 107.690 121.022 108.252 1.00 67.97 C
ATOM 8 O4' G A1922 108.595 120.021 107.719 1.00 67.87 O
ATOM 9 C3' G A1922 107.250 120.458 109.595 1.00 66.49 C
ATOM 10 O3' G A1922 105.996 121.029 109.961 1.00 66.44 O
ATOM 11 C2' G A1922 107.167 118.963 109.299 1.00 66.74 C
ATOM 12 O2' G A1922 106.004 118.585 108.588 1.00 65.99 O
ATOM 13 C1' G A1922 108.362 118.779 108.361 1.00 66.77 C
ATOM 14 N9 G A1922 109.589 118.368 109.039 1.00 65.46 N
ATOM 15 C8 G A1922 110.738 119.104 109.218 1.00 63.99 C
ATOM 16 N7 G A1922 111.671 118.447 109.848 1.00 64.15 N
ATOM 17 C5 G A1922 111.104 117.206 110.103 1.00 64.10 C
ATOM 18 C6 G A1922 111.642 116.068 110.751 1.00 64.90 C
ATOM 19 O6 G A1922 112.771 115.921 111.239 1.00 67.26 O
ATOM 20 N1 G A1922 110.720 115.023 110.799 1.00 63.97 N
ATOM 21 C2 G A1922 109.445 115.069 110.287 1.00 63.71 C
ATOM 22 N2 G A1922 108.692 113.965 110.441 1.00 61.76 N
ATOM 23 N3 G A1922 108.940 116.121 109.671 1.00 63.45 N
ATOM 24 C4 G A1922 109.818 117.146 109.617 1.00 64.31 C
ATOM 25 P U A1923 105.390 120.795 111.431 1.00 65.97 P
ATOM 26 OP1 U A1923 104.376 121.855 111.638 1.00 67.65 O
ATOM 27 OP2 U A1923 106.500 120.645 112.403 1.00 67.55 O
ATOM 28 O5' U A1923 104.609 119.412 111.319 1.00 65.55 O
TER

ATOM 1 O3' G B1922 105.996 121.029 109.961 1.00 66.44 O
ATOM 2 P U B1923 105.390 120.795 111.431 1.00 65.97 P
ATOM 3 OP1 U B1923 104.376 121.855 111.638 1.00 67.65 O
ATOM 4 OP2 U B1923 106.500 120.645 112.403 1.00 67.55 O
ATOM 5 O5' U B1923 104.609 119.412 111.319 1.00 65.55 O
ATOM 6 C5' U B1923 103.769 119.141 110.181 1.00 63.45 C
ATOM 7 C4' U B1923 102.326 118.996 110.601 1.00 61.95 C
ATOM 8 O4' U B1923 102.137 117.723 111.280 1.00 61.46 O
ATOM 9 C3' U B1923 101.763 120.074 111.524 1.00 60.36 C
ATOM 10 O3' U B1923 100.405 120.328 111.190 1.00 60.06 O
ATOM 11 C2' U B1923 101.821 119.402 112.892 1.00 60.55 C
ATOM 12 O2' U B1923 100.838 119.897 113.777 1.00 60.94 O
ATOM 13 C1' U B1923 101.522 117.946 112.532 1.00 60.31 C
ATOM 14 N1 U B1923 102.056 116.967 113.491 1.00 59.00 N
ATOM 15 C2 U B1923 101.156 116.126 114.123 1.00 59.68 C
ATOM 16 O2 U B1923 99.957 116.153 113.909 1.00 59.31 O
ATOM 17 N3 U B1923 101.713 115.248 115.017 1.00 59.74 N
ATOM 18 C4 U B1923 103.049 115.126 115.339 1.00 60.90 C
ATOM 19 O4 U B1923 103.394 114.289 116.174 1.00 63.39 O
ATOM 20 C5 U B1923 103.919 116.022 114.639 1.00 59.22 C
ATOM 21 C6 U B1923 103.406 116.888 113.761 1.00 59.45 C
ATOM 22 P A B1924 99.928 121.827 110.858 1.00 59.13 P
ATOM 23 OP1 A B1924 100.393 122.724 111.947 1.00 59.71 O
ATOM 24 OP2 A B1924 98.481 121.759 110.530 1.00 60.78 O
ATOM 25 O5' A B1924 100.726 122.208 109.532 1.00 60.15 O
TER

Atoms:
OP1: (109.951,124.726,109.378)
OP2: (111.874,123.049,109.747)
C3': (107.250,120.458,109.595)
C1': (108.362,118.779,108.361)
C5': (108.385,122.365,108.276)
O6: (112.771,115.921,111.239)
O4': (108.595,120.021,107.719)
C8: (110.738,119.104,109.218)
C2: (109.445,115.069,110.287)
C6: (111.642,116.068,110.751)
C5: (111.104,117.206,110.103)
C4: (109.818,117.146,109.617)
P: (110.666,123.480,108.986)
C4': (107.690,121.022,108.252)
C2': (107.167,118.963,109.299)
O2': (106.004,118.585,108.588)
N1: (110.720,115.023,110.799)
N2: (108.692,113.965,110.441)
N3: (108.940,116.121,109.671)
N7: (111.671,118.447,109.848)
N9: (109.589,118.368,109.039)
O5': (109.623,122.275,109.000)
O3': (105.996,121.029,109.961)
C4: (103.049,115.126,115.339)
N3: (101.713,115.248,115.017)
OP1: (104.376,121.855,111.638)
OP2: (106.500,120.645,112.403)
C2: (101.156,116.126,114.123)
C1': (101.522,117.946,112.532)
C3': (101.763,120.074,111.524)
O5': (104.609,119.412,111.319)
O4': (102.137,117.723,111.280)
C5': (103.769,119.141,110.181)
P: (105.390,120.795,111.431)
C4': (102.326,118.996,110.601)
C2': (101.821,119.402,112.892)
O2': (100.838,119.897,113.777)
N1: (102.056,116.967,113.491)
O4: (103.394,114.289,116.174)
O2: (99.957,116.153,113.909)
C6: (103.406,116.888,113.761)
C5: (103.919,116.022,114.639)
O3': (100.405,120.328,111.190)
Image (generated by PyMOL):
PyMOL image
show in jmol