Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01922:01923
Extra
PDB:
ATOM 1 O3' C A1921 110.756 124.461 107.830 1.00 45.93 O
ATOM 2 P G A1922 110.421 124.320 109.392 1.00 46.37 P
ATOM 3 OP1 G A1922 109.807 125.596 109.854 1.00 47.46 O
ATOM 4 OP2 G A1922 111.636 123.806 110.065 1.00 48.50 O
ATOM 5 O5' G A1922 109.320 123.173 109.467 1.00 45.18 O
ATOM 6 C5' G A1922 108.110 123.275 108.715 1.00 45.91 C
ATOM 7 C4' G A1922 107.407 121.947 108.678 1.00 46.79 C
ATOM 8 O4' G A1922 108.303 120.941 108.139 1.00 49.38 O
ATOM 9 C3' G A1922 106.978 121.380 110.016 1.00 45.74 C
ATOM 10 O3' G A1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 11 C2' G A1922 106.846 119.897 109.694 1.00 48.18 C
ATOM 12 O2' G A1922 105.681 119.601 108.951 1.00 47.66 O
ATOM 13 C1' G A1922 108.041 119.691 108.762 1.00 51.27 C
ATOM 14 N9 G A1922 109.259 119.248 109.439 1.00 55.10 N
ATOM 15 C8 G A1922 110.422 119.963 109.590 1.00 55.63 C
ATOM 16 N7 G A1922 111.348 119.306 110.230 1.00 57.08 N
ATOM 17 C5 G A1922 110.764 118.083 110.521 1.00 57.33 C
ATOM 18 C6 G A1922 111.292 116.957 111.197 1.00 59.35 C
ATOM 19 O6 G A1922 112.424 116.810 111.682 1.00 61.29 O
ATOM 20 N1 G A1922 110.359 115.927 111.280 1.00 58.92 N
ATOM 21 C2 G A1922 109.087 115.971 110.774 1.00 57.80 C
ATOM 22 N2 G A1922 108.339 114.871 110.963 1.00 55.66 N
ATOM 23 N3 G A1922 108.585 117.015 110.132 1.00 57.94 N
ATOM 24 C4 G A1922 109.473 118.029 110.044 1.00 56.51 C
ATOM 25 P U A1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 26 OP1 U A1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 27 OP2 U A1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 28 O5' U A1923 104.343 120.460 111.863 1.00 45.25 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
ATOM 2 P G A1922 110.421 124.320 109.392 1.00 46.37 P
ATOM 3 OP1 G A1922 109.807 125.596 109.854 1.00 47.46 O
ATOM 4 OP2 G A1922 111.636 123.806 110.065 1.00 48.50 O
ATOM 5 O5' G A1922 109.320 123.173 109.467 1.00 45.18 O
ATOM 6 C5' G A1922 108.110 123.275 108.715 1.00 45.91 C
ATOM 7 C4' G A1922 107.407 121.947 108.678 1.00 46.79 C
ATOM 8 O4' G A1922 108.303 120.941 108.139 1.00 49.38 O
ATOM 9 C3' G A1922 106.978 121.380 110.016 1.00 45.74 C
ATOM 10 O3' G A1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 11 C2' G A1922 106.846 119.897 109.694 1.00 48.18 C
ATOM 12 O2' G A1922 105.681 119.601 108.951 1.00 47.66 O
ATOM 13 C1' G A1922 108.041 119.691 108.762 1.00 51.27 C
ATOM 14 N9 G A1922 109.259 119.248 109.439 1.00 55.10 N
ATOM 15 C8 G A1922 110.422 119.963 109.590 1.00 55.63 C
ATOM 16 N7 G A1922 111.348 119.306 110.230 1.00 57.08 N
ATOM 17 C5 G A1922 110.764 118.083 110.521 1.00 57.33 C
ATOM 18 C6 G A1922 111.292 116.957 111.197 1.00 59.35 C
ATOM 19 O6 G A1922 112.424 116.810 111.682 1.00 61.29 O
ATOM 20 N1 G A1922 110.359 115.927 111.280 1.00 58.92 N
ATOM 21 C2 G A1922 109.087 115.971 110.774 1.00 57.80 C
ATOM 22 N2 G A1922 108.339 114.871 110.963 1.00 55.66 N
ATOM 23 N3 G A1922 108.585 117.015 110.132 1.00 57.94 N
ATOM 24 C4 G A1922 109.473 118.029 110.044 1.00 56.51 C
ATOM 25 P U A1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 26 OP1 U A1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 27 OP2 U A1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 28 O5' U A1923 104.343 120.460 111.863 1.00 45.25 O
TER
ATOM 1 O3' G B1922 105.756 121.979 110.422 1.00 44.21 O
ATOM 2 P U B1923 105.222 121.786 111.926 1.00 46.04 P
ATOM 3 OP1 U B1923 104.305 122.913 112.243 1.00 46.17 O
ATOM 4 OP2 U B1923 106.383 121.521 112.811 1.00 49.18 O
ATOM 5 O5' U B1923 104.343 120.460 111.863 1.00 45.25 O
ATOM 6 C5' U B1923 103.508 120.189 110.726 1.00 43.54 C
ATOM 7 C4' U B1923 102.066 120.017 111.146 1.00 43.49 C
ATOM 8 O4' U B1923 101.882 118.731 111.800 1.00 44.23 O
ATOM 9 C3' U B1923 101.477 121.072 112.077 1.00 42.08 C
ATOM 10 O3' U B1923 100.140 121.333 111.685 1.00 43.55 O
ATOM 11 C2' U B1923 101.487 120.371 113.433 1.00 43.68 C
ATOM 12 O2' U B1923 100.462 120.811 114.305 1.00 43.74 O
ATOM 13 C1' U B1923 101.220 118.922 113.033 1.00 44.30 C
ATOM 14 N1 U B1923 101.727 117.931 113.997 1.00 46.49 N
ATOM 15 C2 U B1923 100.800 117.124 114.642 1.00 47.76 C
ATOM 16 O2 U B1923 99.599 117.206 114.455 1.00 49.65 O
ATOM 17 N3 U B1923 101.334 116.213 115.516 1.00 48.15 N
ATOM 18 C4 U B1923 102.666 116.026 115.809 1.00 47.83 C
ATOM 19 O4 U B1923 102.991 115.121 116.579 1.00 48.73 O
ATOM 20 C5 U B1923 103.561 116.901 115.113 1.00 46.86 C
ATOM 21 C6 U B1923 103.075 117.799 114.253 1.00 45.41 C
ATOM 22 P A B1924 99.713 122.819 111.250 1.00 44.26 P
ATOM 23 OP1 A B1924 100.149 123.751 112.327 1.00 45.25 O
ATOM 24 OP2 A B1924 98.286 122.790 110.847 1.00 47.05 O
ATOM 25 O5' A B1924 100.577 123.093 109.943 1.00 42.06 O
TER
Atoms:
OP1: (109.807,125.596,109.854)
OP2: (111.636,123.806,110.065)
C3': (106.978,121.380,110.016)
C1': (108.041,119.691,108.762)
C5': (108.110,123.275,108.715)
O6: (112.424,116.810,111.682)
O4': (108.303,120.941,108.139)
C8: (110.422,119.963,109.590)
C2: (109.087,115.971,110.774)
C6: (111.292,116.957,111.197)
C5: (110.764,118.083,110.521)
C4: (109.473,118.029,110.044)
P: (110.421,124.320,109.392)
C4': (107.407,121.947,108.678)
C2': (106.846,119.897,109.694)
O2': (105.681,119.601,108.951)
N1: (110.359,115.927,111.280)
N2: (108.339,114.871,110.963)
N3: (108.585,117.015,110.132)
N7: (111.348,119.306,110.230)
N9: (109.259,119.248,109.439)
O5': (109.320,123.173,109.467)
O3': (105.756,121.979,110.422)
OP2: (111.636,123.806,110.065)
C3': (106.978,121.380,110.016)
C1': (108.041,119.691,108.762)
C5': (108.110,123.275,108.715)
O6: (112.424,116.810,111.682)
O4': (108.303,120.941,108.139)
C8: (110.422,119.963,109.590)
C2: (109.087,115.971,110.774)
C6: (111.292,116.957,111.197)
C5: (110.764,118.083,110.521)
C4: (109.473,118.029,110.044)
P: (110.421,124.320,109.392)
C4': (107.407,121.947,108.678)
C2': (106.846,119.897,109.694)
O2': (105.681,119.601,108.951)
N1: (110.359,115.927,111.280)
N2: (108.339,114.871,110.963)
N3: (108.585,117.015,110.132)
N7: (111.348,119.306,110.230)
N9: (109.259,119.248,109.439)
O5': (109.320,123.173,109.467)
O3': (105.756,121.979,110.422)
C4: (102.666,116.026,115.809)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
N3: (101.334,116.213,115.516)
OP1: (104.305,122.913,112.243)
OP2: (106.383,121.521,112.811)
C2: (100.800,117.124,114.642)
C1': (101.220,118.922,113.033)
C3': (101.477,121.072,112.077)
O5': (104.343,120.460,111.863)
O4': (101.882,118.731,111.800)
C5': (103.508,120.189,110.726)
P: (105.222,121.786,111.926)
C4': (102.066,120.017,111.146)
C2': (101.487,120.371,113.433)
O2': (100.462,120.811,114.305)
N1: (101.727,117.931,113.997)
O4: (102.991,115.121,116.579)
O2: (99.599,117.206,114.455)
C6: (103.075,117.799,114.253)
C5: (103.561,116.901,115.113)
O3': (100.140,121.333,111.685)
Image (generated by PyMOL):