ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01922:01923

Extra

PDB:
ATOM 1 O3' C A1921 110.982 124.380 107.661 1.00 48.53 O
ATOM 2 P G A1922 110.602 124.226 109.212 1.00 48.97 P
ATOM 3 OP1 G A1922 109.926 125.485 109.633 1.00 50.01 O
ATOM 4 OP2 G A1922 111.807 123.766 109.939 1.00 51.36 O
ATOM 5 O5' G A1922 109.546 123.033 109.248 1.00 48.49 O
ATOM 6 C5' G A1922 108.310 123.129 108.522 1.00 49.06 C
ATOM 7 C4' G A1922 107.598 121.803 108.515 1.00 47.96 C
ATOM 8 O4' G A1922 108.484 120.786 107.985 1.00 50.23 O
ATOM 9 C3' G A1922 107.179 121.260 109.866 1.00 46.62 C
ATOM 10 O3' G A1922 105.949 121.842 110.265 1.00 44.95 O
ATOM 11 C2' G A1922 107.052 119.772 109.578 1.00 48.33 C
ATOM 12 O2' G A1922 105.873 119.476 108.857 1.00 46.65 O
ATOM 13 C1' G A1922 108.243 119.553 108.643 1.00 51.26 C
ATOM 14 N9 G A1922 109.478 119.155 109.313 1.00 54.78 N
ATOM 15 C8 G A1922 110.606 119.922 109.472 1.00 56.52 C
ATOM 16 N7 G A1922 111.569 119.298 110.089 1.00 57.50 N
ATOM 17 C5 G A1922 111.046 118.044 110.360 1.00 57.15 C
ATOM 18 C6 G A1922 111.632 116.937 111.007 1.00 59.10 C
ATOM 19 O6 G A1922 112.775 116.838 111.482 1.00 61.53 O
ATOM 20 N1 G A1922 110.749 115.862 111.079 1.00 58.02 N
ATOM 21 C2 G A1922 109.469 115.858 110.591 1.00 56.39 C
ATOM 22 N2 G A1922 108.772 114.728 110.778 1.00 55.76 N
ATOM 23 N3 G A1922 108.914 116.885 109.973 1.00 56.50 N
ATOM 24 C4 G A1922 109.753 117.939 109.894 1.00 56.04 C
ATOM 25 P U A1923 105.412 121.627 111.763 1.00 46.58 P
ATOM 26 OP1 U A1923 104.479 122.737 112.098 1.00 45.89 O
ATOM 27 OP2 U A1923 106.578 121.365 112.641 1.00 47.41 O
ATOM 28 O5' U A1923 104.563 120.283 111.678 1.00 45.71 O
TER

ATOM 1 O3' G B1922 105.949 121.842 110.265 1.00 44.95 O
ATOM 2 P U B1923 105.412 121.627 111.763 1.00 46.58 P
ATOM 3 OP1 U B1923 104.479 122.737 112.098 1.00 45.89 O
ATOM 4 OP2 U B1923 106.578 121.365 112.641 1.00 47.41 O
ATOM 5 O5' U B1923 104.563 120.283 111.678 1.00 45.71 O
ATOM 6 C5' U B1923 103.702 120.033 110.558 1.00 43.71 C
ATOM 7 C4' U B1923 102.272 119.889 111.010 1.00 41.77 C
ATOM 8 O4' U B1923 102.092 118.616 111.683 1.00 42.10 O
ATOM 9 C3' U B1923 101.736 120.959 111.952 1.00 40.75 C
ATOM 10 O3' U B1923 100.392 121.230 111.611 1.00 42.30 O
ATOM 11 C2' U B1923 101.786 120.267 113.311 1.00 42.15 C
ATOM 12 O2' U B1923 100.807 120.748 114.212 1.00 41.84 O
ATOM 13 C1' U B1923 101.469 118.825 112.929 1.00 42.24 C
ATOM 14 N1 U B1923 101.962 117.810 113.871 1.00 44.90 N
ATOM 15 C2 U B1923 101.027 116.977 114.465 1.00 47.46 C
ATOM 16 O2 U B1923 99.829 117.058 114.252 1.00 49.24 O
ATOM 17 N3 U B1923 101.546 116.042 115.319 1.00 48.80 N
ATOM 18 C4 U B1923 102.872 115.855 115.639 1.00 50.05 C
ATOM 19 O4 U B1923 103.182 114.946 116.414 1.00 53.78 O
ATOM 20 C5 U B1923 103.777 116.757 114.993 1.00 47.53 C
ATOM 21 C6 U B1923 103.303 117.679 114.154 1.00 45.38 C
ATOM 22 P A B1924 99.994 122.676 111.047 1.00 44.01 P
ATOM 23 OP1 A B1924 100.369 123.683 112.073 1.00 45.35 O
ATOM 24 OP2 A B1924 98.589 122.610 110.567 1.00 45.39 O
ATOM 25 O5' A B1924 100.941 122.855 109.782 1.00 42.68 O
TER

Atoms:
OP1: (109.926,125.485,109.633)
OP2: (111.807,123.766,109.939)
C3': (107.179,121.260,109.866)
C1': (108.243,119.553,108.643)
C5': (108.310,123.129,108.522)
O6: (112.775,116.838,111.482)
O4': (108.484,120.786,107.985)
C8: (110.606,119.922,109.472)
C2: (109.469,115.858,110.591)
C6: (111.632,116.937,111.007)
C5: (111.046,118.044,110.360)
C4: (109.753,117.939,109.894)
P: (110.602,124.226,109.212)
C4': (107.598,121.803,108.515)
C2': (107.052,119.772,109.578)
O2': (105.873,119.476,108.857)
N1: (110.749,115.862,111.079)
N2: (108.772,114.728,110.778)
N3: (108.914,116.885,109.973)
N7: (111.569,119.298,110.089)
N9: (109.478,119.155,109.313)
O5': (109.546,123.033,109.248)
O3': (105.949,121.842,110.265)
C4: (102.872,115.855,115.639)
N3: (101.546,116.042,115.319)
OP1: (104.479,122.737,112.098)
OP2: (106.578,121.365,112.641)
C2: (101.027,116.977,114.465)
C1': (101.469,118.825,112.929)
C3': (101.736,120.959,111.952)
O5': (104.563,120.283,111.678)
O4': (102.092,118.616,111.683)
C5': (103.702,120.033,110.558)
P: (105.412,121.627,111.763)
C4': (102.272,119.889,111.010)
C2': (101.786,120.267,113.311)
O2': (100.807,120.748,114.212)
N1: (101.962,117.810,113.871)
O4: (103.182,114.946,116.414)
O2: (99.829,117.058,114.252)
C6: (103.303,117.679,114.154)
C5: (103.777,116.757,114.993)
O3': (100.392,121.230,111.611)
Image (generated by PyMOL):
PyMOL image
show in jmol