ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01922:01923

Extra

PDB:
ATOM 1 O3' C A1921 111.044 124.589 108.304 1.00 58.71 O
ATOM 2 P G A1922 110.568 124.401 109.830 1.00 59.39 P
ATOM 3 OP1 G A1922 109.794 125.606 110.228 1.00 59.69 O
ATOM 4 OP2 G A1922 111.742 123.986 110.644 1.00 59.84 O
ATOM 5 O5' G A1922 109.561 123.171 109.776 1.00 58.74 O
ATOM 6 C5' G A1922 108.358 123.245 108.997 1.00 59.23 C
ATOM 7 C4' G A1922 107.636 121.923 109.017 1.00 57.83 C
ATOM 8 O4' G A1922 108.520 120.892 108.512 1.00 59.83 O
ATOM 9 C3' G A1922 107.217 121.412 110.380 1.00 56.68 C
ATOM 10 O3' G A1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 11 C2' G A1922 107.075 119.920 110.122 1.00 59.17 C
ATOM 12 O2' G A1922 105.895 119.605 109.413 1.00 59.25 O
ATOM 13 C1' G A1922 108.260 119.672 109.187 1.00 62.09 C
ATOM 14 N9 G A1922 109.483 119.254 109.871 1.00 65.86 N
ATOM 15 C8 G A1922 110.637 119.984 110.024 1.00 67.93 C
ATOM 16 N7 G A1922 111.568 119.343 110.675 1.00 68.55 N
ATOM 17 C5 G A1922 110.995 118.117 110.971 1.00 69.39 C
ATOM 18 C6 G A1922 111.525 117.005 111.663 1.00 71.97 C
ATOM 19 O6 G A1922 112.652 116.878 112.169 1.00 75.70 O
ATOM 20 N1 G A1922 110.605 115.965 111.743 1.00 71.55 N
ATOM 21 C2 G A1922 109.339 115.992 111.225 1.00 70.37 C
ATOM 22 N2 G A1922 108.603 114.890 111.410 1.00 70.62 N
ATOM 23 N3 G A1922 108.832 117.023 110.575 1.00 69.95 N
ATOM 24 C4 G A1922 109.709 118.045 110.485 1.00 67.86 C
ATOM 25 P U A1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 26 OP1 U A1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 27 OP2 U A1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 28 O5' U A1923 104.565 120.538 112.247 1.00 53.80 O
TER

ATOM 1 O3' G B1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 2 P U B1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 3 OP1 U B1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 4 OP2 U B1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 5 O5' U B1923 104.565 120.538 112.247 1.00 53.80 O
ATOM 6 C5' U B1923 103.692 120.306 111.129 1.00 53.92 C
ATOM 7 C4' U B1923 102.255 120.172 111.582 1.00 53.05 C
ATOM 8 O4' U B1923 102.066 118.903 112.266 1.00 52.42 O
ATOM 9 C3' U B1923 101.703 121.252 112.505 1.00 52.23 C
ATOM 10 O3' U B1923 100.370 121.548 112.118 1.00 55.37 O
ATOM 11 C2' U B1923 101.714 120.567 113.870 1.00 52.37 C
ATOM 12 O2' U B1923 100.711 121.040 114.743 1.00 51.94 O
ATOM 13 C1' U B1923 101.409 119.123 113.490 1.00 52.59 C
ATOM 14 N1 U B1923 101.877 118.119 114.458 1.00 54.98 N
ATOM 15 C2 U B1923 100.920 117.317 115.063 1.00 57.32 C
ATOM 16 O2 U B1923 99.726 117.410 114.826 1.00 59.43 O
ATOM 17 N3 U B1923 101.412 116.397 115.954 1.00 57.62 N
ATOM 18 C4 U B1923 102.732 116.195 116.295 1.00 58.19 C
ATOM 19 O4 U B1923 103.017 115.298 117.087 1.00 59.03 O
ATOM 20 C5 U B1923 103.661 117.062 115.632 1.00 56.58 C
ATOM 21 C6 U B1923 103.213 117.970 114.758 1.00 55.04 C
ATOM 22 P A B1924 100.004 123.020 111.576 1.00 57.25 P
ATOM 23 OP1 A B1924 100.428 124.006 112.611 1.00 58.03 O
ATOM 24 OP2 A B1924 98.592 123.012 111.105 1.00 58.57 O
ATOM 25 O5' A B1924 100.941 123.207 110.305 1.00 55.68 O
TER

Atoms:
OP1: (109.794,125.606,110.228)
OP2: (111.742,123.986,110.644)
C3': (107.217,121.412,110.380)
C1': (108.260,119.672,109.187)
C5': (108.358,123.245,108.997)
O6: (112.652,116.878,112.169)
O4': (108.520,120.892,108.512)
C8: (110.637,119.984,110.024)
C2: (109.339,115.992,111.225)
C6: (111.525,117.005,111.663)
C5: (110.995,118.117,110.971)
C4: (109.709,118.045,110.485)
P: (110.568,124.401,109.830)
C4': (107.636,121.923,109.017)
C2': (107.075,119.920,110.122)
O2': (105.895,119.605,109.413)
N1: (110.605,115.965,111.743)
N2: (108.603,114.890,111.410)
N3: (108.832,117.023,110.575)
N7: (111.568,119.343,110.675)
N9: (109.483,119.254,109.871)
O5': (109.561,123.171,109.776)
O3': (106.002,122.021,110.791)
C4: (102.732,116.195,116.295)
N3: (101.412,116.397,115.954)
OP1: (104.615,122.991,112.614)
OP2: (106.632,121.526,113.189)
C2: (100.920,117.317,115.063)
C1': (101.409,119.123,113.490)
C3': (101.703,121.252,112.505)
O5': (104.565,120.538,112.247)
O4': (102.066,118.903,112.266)
C5': (103.692,120.306,111.129)
P: (105.482,121.836,112.302)
C4': (102.255,120.172,111.582)
C2': (101.714,120.567,113.870)
O2': (100.711,121.040,114.743)
N1: (101.877,118.119,114.458)
O4: (103.017,115.298,117.087)
O2: (99.726,117.410,114.826)
C6: (103.213,117.970,114.758)
C5: (103.661,117.062,115.632)
O3': (100.370,121.548,112.118)
Image (generated by PyMOL):
PyMOL image
show in jmol