ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01922:01923

Extra

PDB:
ATOM 1 O3' C A1921 110.931 124.555 107.694 1.00 54.00 O
ATOM 2 P G A1922 110.606 124.432 109.262 1.00 54.93 P
ATOM 3 OP1 G A1922 109.957 125.692 109.707 1.00 56.41 O
ATOM 4 OP2 G A1922 111.831 123.961 109.946 1.00 56.46 O
ATOM 5 O5' G A1922 109.537 123.254 109.355 1.00 54.65 O
ATOM 6 C5' G A1922 108.294 123.336 108.647 1.00 54.06 C
ATOM 7 C4' G A1922 107.590 122.002 108.659 1.00 53.74 C
ATOM 8 O4' G A1922 108.485 120.976 108.166 1.00 54.25 O
ATOM 9 C3' G A1922 107.146 121.480 110.010 1.00 53.55 C
ATOM 10 O3' G A1922 105.905 122.066 110.366 1.00 55.14 O
ATOM 11 C2' G A1922 107.001 119.992 109.741 1.00 54.42 C
ATOM 12 O2' G A1922 105.805 119.714 109.042 1.00 52.58 O
ATOM 13 C1' G A1922 108.181 119.741 108.796 1.00 56.17 C
ATOM 14 N9 G A1922 109.403 119.222 109.415 1.00 58.22 N
ATOM 15 C8 G A1922 110.616 119.862 109.495 1.00 59.70 C
ATOM 16 N7 G A1922 111.540 119.143 110.069 1.00 60.04 N
ATOM 17 C5 G A1922 110.901 117.959 110.399 1.00 60.25 C
ATOM 18 C6 G A1922 111.400 116.805 111.042 1.00 62.25 C
ATOM 19 O6 G A1922 112.547 116.591 111.458 1.00 65.34 O
ATOM 20 N1 G A1922 110.415 115.834 111.189 1.00 61.89 N
ATOM 21 C2 G A1922 109.117 115.960 110.774 1.00 60.96 C
ATOM 22 N2 G A1922 108.319 114.908 111.019 1.00 60.03 N
ATOM 23 N3 G A1922 108.637 117.035 110.166 1.00 60.95 N
ATOM 24 C4 G A1922 109.579 117.990 110.012 1.00 59.34 C
ATOM 25 P U A1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 26 OP1 U A1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 27 OP2 U A1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 28 O5' U A1923 104.548 120.561 111.881 1.00 56.13 O
TER

ATOM 1 O3' G B1922 105.905 122.066 110.366 1.00 55.14 O
ATOM 2 P U B1923 105.358 121.934 111.871 1.00 57.70 P
ATOM 3 OP1 U B1923 104.389 123.036 112.120 1.00 56.51 O
ATOM 4 OP2 U B1923 106.540 121.784 112.763 1.00 60.16 O
ATOM 5 O5' U B1923 104.548 120.561 111.881 1.00 56.13 O
ATOM 6 C5' U B1923 103.727 120.184 110.759 1.00 54.94 C
ATOM 7 C4' U B1923 102.282 120.006 111.174 1.00 52.45 C
ATOM 8 O4' U B1923 102.093 118.721 111.822 1.00 50.95 O
ATOM 9 C3' U B1923 101.674 121.058 112.096 1.00 51.46 C
ATOM 10 O3' U B1923 100.348 121.330 111.677 1.00 52.32 O
ATOM 11 C2' U B1923 101.656 120.345 113.447 1.00 52.14 C
ATOM 12 O2' U B1923 100.630 120.789 114.313 1.00 52.50 O
ATOM 13 C1' U B1923 101.388 118.903 113.028 1.00 51.78 C
ATOM 14 N1 U B1923 101.843 117.892 113.995 1.00 53.57 N
ATOM 15 C2 U B1923 100.879 117.109 114.608 1.00 54.95 C
ATOM 16 O2 U B1923 99.683 117.232 114.396 1.00 56.37 O
ATOM 17 N3 U B1923 101.364 116.173 115.484 1.00 55.52 N
ATOM 18 C4 U B1923 102.683 115.942 115.808 1.00 56.31 C
ATOM 19 O4 U B1923 102.962 115.024 116.588 1.00 58.19 O
ATOM 20 C5 U B1923 103.620 116.797 115.144 1.00 54.97 C
ATOM 21 C6 U B1923 103.180 117.717 114.282 1.00 54.04 C
ATOM 22 P A B1924 99.958 122.805 111.167 1.00 53.27 P
ATOM 23 OP1 A B1924 100.412 123.772 112.203 1.00 53.52 O
ATOM 24 OP2 A B1924 98.527 122.788 110.760 1.00 54.40 O
ATOM 25 O5' A B1924 100.837 123.011 109.853 1.00 51.41 O
TER

Atoms:
OP1: (109.957,125.692,109.707)
OP2: (111.831,123.961,109.946)
C3': (107.146,121.480,110.010)
C1': (108.181,119.741,108.796)
C5': (108.294,123.336,108.647)
O6: (112.547,116.591,111.458)
O4': (108.485,120.976,108.166)
C8: (110.616,119.862,109.495)
C2: (109.117,115.960,110.774)
C6: (111.400,116.805,111.042)
C5: (110.901,117.959,110.399)
C4: (109.579,117.990,110.012)
P: (110.606,124.432,109.262)
C4': (107.590,122.002,108.659)
C2': (107.001,119.992,109.741)
O2': (105.805,119.714,109.042)
N1: (110.415,115.834,111.189)
N2: (108.319,114.908,111.019)
N3: (108.637,117.035,110.166)
N7: (111.540,119.143,110.069)
N9: (109.403,119.222,109.415)
O5': (109.537,123.254,109.355)
O3': (105.905,122.066,110.366)
C4: (102.683,115.942,115.808)
N3: (101.364,116.173,115.484)
OP1: (104.389,123.036,112.120)
OP2: (106.540,121.784,112.763)
C2: (100.879,117.109,114.608)
C1': (101.388,118.903,113.028)
C3': (101.674,121.058,112.096)
O5': (104.548,120.561,111.881)
O4': (102.093,118.721,111.822)
C5': (103.727,120.184,110.759)
P: (105.358,121.934,111.871)
C4': (102.282,120.006,111.174)
C2': (101.656,120.345,113.447)
O2': (100.630,120.789,114.313)
N1: (101.843,117.892,113.995)
O4: (102.962,115.024,116.588)
O2: (99.683,117.232,114.396)
C6: (103.180,117.717,114.282)
C5: (103.620,116.797,115.144)
O3': (100.348,121.330,111.677)
Image (generated by PyMOL):
PyMOL image
show in jmol