Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21178:21585
Extra
PDB:
ATOM 1 O3' C A1177 -63.430 -49.682 57.024 1.00 77.87 O
ATOM 2 P A A1178 -63.659 -51.270 57.182 1.00 73.55 P
ATOM 3 OP1 A A1178 -64.978 -51.439 57.847 1.00 73.95 O
ATOM 4 OP2 A A1178 -62.477 -51.873 57.817 1.00 73.48 O
ATOM 5 O5' A A1178 -63.736 -51.693 55.653 1.00 73.57 O
ATOM 6 C5' A A1178 -64.059 -53.015 55.270 1.00 73.96 C
ATOM 7 C4' A A1178 -65.555 -53.276 55.277 1.00 74.38 C
ATOM 8 O4' A A1178 -65.770 -54.363 54.355 1.00 74.66 O
ATOM 9 C3' A A1178 -66.097 -53.738 56.639 1.00 74.73 C
ATOM 10 O3' A A1178 -67.317 -53.041 57.124 1.00 74.90 O
ATOM 11 C2' A A1178 -66.235 -55.262 56.510 1.00 75.16 C
ATOM 12 O2' A A1178 -67.320 -55.855 57.199 1.00 75.66 O
ATOM 13 C1' A A1178 -66.298 -55.494 55.005 1.00 75.13 C
ATOM 14 N9 A A1178 -65.559 -56.691 54.576 1.00 75.24 N
ATOM 15 C8 A A1178 -64.964 -57.530 55.480 1.00 75.40 C
ATOM 16 N7 A A1178 -64.407 -58.596 54.974 1.00 75.53 N
ATOM 17 C5 A A1178 -64.694 -58.502 53.629 1.00 75.47 C
ATOM 18 C6 A A1178 -64.393 -59.378 52.575 1.00 75.58 C
ATOM 19 N6 A A1178 -63.719 -60.528 52.736 1.00 75.78 N
ATOM 20 N1 A A1178 -64.787 -59.015 51.339 1.00 75.50 N
ATOM 21 C2 A A1178 -65.454 -57.863 51.199 1.00 75.34 C
ATOM 22 N3 A A1178 -65.819 -56.968 52.118 1.00 75.23 N
ATOM 23 C4 A A1178 -65.401 -57.340 53.350 1.00 75.30 C
ATOM 24 P C A1179 -68.532 -52.522 56.182 1.00 72.18 P
ATOM 25 OP1 C A1179 -69.745 -52.494 57.021 1.00 72.58 O
ATOM 26 OP2 C A1179 -68.532 -53.367 54.974 1.00 72.32 O
ATOM 27 O5' C A1179 -68.138 -51.031 55.790 1.00 71.69 O
TER
ATOM 1 O3' C B1584 -69.446 -57.724 56.904 1.00 71.43 O
ATOM 2 P U B1585 -70.543 -57.998 58.012 1.00 76.11 P
ATOM 3 OP1 U B1585 -70.120 -57.229 59.227 1.00 75.90 O
ATOM 4 OP2 U B1585 -70.699 -59.465 58.107 1.00 76.59 O
ATOM 5 O5' U B1585 -71.843 -57.341 57.382 1.00 76.25 O
ATOM 6 C5' U B1585 -71.975 -55.929 57.355 1.00 75.90 C
ATOM 7 C4' U B1585 -72.886 -55.469 56.252 1.00 75.97 C
ATOM 8 O4' U B1585 -72.687 -56.286 55.079 1.00 76.03 O
ATOM 9 C3' U B1585 -74.370 -55.563 56.536 1.00 76.50 C
ATOM 10 O3' U B1585 -74.840 -54.464 57.285 1.00 76.44 O
ATOM 11 C2' U B1585 -74.969 -55.633 55.144 1.00 76.62 C
ATOM 12 O2' U B1585 -75.037 -54.336 54.577 1.00 76.29 O
ATOM 13 C1' U B1585 -73.903 -56.431 54.388 1.00 76.41 C
ATOM 14 N1 U B1585 -74.216 -57.879 54.294 1.00 76.88 N
ATOM 15 C2 U B1585 -75.226 -58.319 53.453 1.00 77.28 C
ATOM 16 O2 U B1585 -75.920 -57.536 52.811 1.00 77.28 O
ATOM 17 N3 U B1585 -75.392 -59.697 53.416 1.00 77.69 N
ATOM 18 C4 U B1585 -74.670 -60.658 54.113 1.00 77.77 C
ATOM 19 O4 U B1585 -74.911 -61.872 53.998 1.00 78.18 O
ATOM 20 C5 U B1585 -73.641 -60.096 54.938 1.00 77.35 C
ATOM 21 C6 U B1585 -73.443 -58.774 54.996 1.00 76.93 C
ATOM 22 P U B1586 -75.786 -54.686 58.568 1.00 81.85 P
ATOM 23 OP1 U B1586 -75.587 -53.521 59.464 1.00 81.57 O
ATOM 24 OP2 U B1586 -75.512 -56.048 59.091 1.00 82.17 O
ATOM 25 O5' U B1586 -77.243 -54.643 57.946 1.00 82.30 O
TER
ATOM 2 P A A1178 -63.659 -51.270 57.182 1.00 73.55 P
ATOM 3 OP1 A A1178 -64.978 -51.439 57.847 1.00 73.95 O
ATOM 4 OP2 A A1178 -62.477 -51.873 57.817 1.00 73.48 O
ATOM 5 O5' A A1178 -63.736 -51.693 55.653 1.00 73.57 O
ATOM 6 C5' A A1178 -64.059 -53.015 55.270 1.00 73.96 C
ATOM 7 C4' A A1178 -65.555 -53.276 55.277 1.00 74.38 C
ATOM 8 O4' A A1178 -65.770 -54.363 54.355 1.00 74.66 O
ATOM 9 C3' A A1178 -66.097 -53.738 56.639 1.00 74.73 C
ATOM 10 O3' A A1178 -67.317 -53.041 57.124 1.00 74.90 O
ATOM 11 C2' A A1178 -66.235 -55.262 56.510 1.00 75.16 C
ATOM 12 O2' A A1178 -67.320 -55.855 57.199 1.00 75.66 O
ATOM 13 C1' A A1178 -66.298 -55.494 55.005 1.00 75.13 C
ATOM 14 N9 A A1178 -65.559 -56.691 54.576 1.00 75.24 N
ATOM 15 C8 A A1178 -64.964 -57.530 55.480 1.00 75.40 C
ATOM 16 N7 A A1178 -64.407 -58.596 54.974 1.00 75.53 N
ATOM 17 C5 A A1178 -64.694 -58.502 53.629 1.00 75.47 C
ATOM 18 C6 A A1178 -64.393 -59.378 52.575 1.00 75.58 C
ATOM 19 N6 A A1178 -63.719 -60.528 52.736 1.00 75.78 N
ATOM 20 N1 A A1178 -64.787 -59.015 51.339 1.00 75.50 N
ATOM 21 C2 A A1178 -65.454 -57.863 51.199 1.00 75.34 C
ATOM 22 N3 A A1178 -65.819 -56.968 52.118 1.00 75.23 N
ATOM 23 C4 A A1178 -65.401 -57.340 53.350 1.00 75.30 C
ATOM 24 P C A1179 -68.532 -52.522 56.182 1.00 72.18 P
ATOM 25 OP1 C A1179 -69.745 -52.494 57.021 1.00 72.58 O
ATOM 26 OP2 C A1179 -68.532 -53.367 54.974 1.00 72.32 O
ATOM 27 O5' C A1179 -68.138 -51.031 55.790 1.00 71.69 O
TER
ATOM 1 O3' C B1584 -69.446 -57.724 56.904 1.00 71.43 O
ATOM 2 P U B1585 -70.543 -57.998 58.012 1.00 76.11 P
ATOM 3 OP1 U B1585 -70.120 -57.229 59.227 1.00 75.90 O
ATOM 4 OP2 U B1585 -70.699 -59.465 58.107 1.00 76.59 O
ATOM 5 O5' U B1585 -71.843 -57.341 57.382 1.00 76.25 O
ATOM 6 C5' U B1585 -71.975 -55.929 57.355 1.00 75.90 C
ATOM 7 C4' U B1585 -72.886 -55.469 56.252 1.00 75.97 C
ATOM 8 O4' U B1585 -72.687 -56.286 55.079 1.00 76.03 O
ATOM 9 C3' U B1585 -74.370 -55.563 56.536 1.00 76.50 C
ATOM 10 O3' U B1585 -74.840 -54.464 57.285 1.00 76.44 O
ATOM 11 C2' U B1585 -74.969 -55.633 55.144 1.00 76.62 C
ATOM 12 O2' U B1585 -75.037 -54.336 54.577 1.00 76.29 O
ATOM 13 C1' U B1585 -73.903 -56.431 54.388 1.00 76.41 C
ATOM 14 N1 U B1585 -74.216 -57.879 54.294 1.00 76.88 N
ATOM 15 C2 U B1585 -75.226 -58.319 53.453 1.00 77.28 C
ATOM 16 O2 U B1585 -75.920 -57.536 52.811 1.00 77.28 O
ATOM 17 N3 U B1585 -75.392 -59.697 53.416 1.00 77.69 N
ATOM 18 C4 U B1585 -74.670 -60.658 54.113 1.00 77.77 C
ATOM 19 O4 U B1585 -74.911 -61.872 53.998 1.00 78.18 O
ATOM 20 C5 U B1585 -73.641 -60.096 54.938 1.00 77.35 C
ATOM 21 C6 U B1585 -73.443 -58.774 54.996 1.00 76.93 C
ATOM 22 P U B1586 -75.786 -54.686 58.568 1.00 81.85 P
ATOM 23 OP1 U B1586 -75.587 -53.521 59.464 1.00 81.57 O
ATOM 24 OP2 U B1586 -75.512 -56.048 59.091 1.00 82.17 O
ATOM 25 O5' U B1586 -77.243 -54.643 57.946 1.00 82.30 O
TER
Atoms:
OP1: (-64.978,-51.439,57.847)
OP2: (-62.477,-51.873,57.817)
C3': (-66.097,-53.738,56.639)
C1': (-66.298,-55.494,55.005)
C5': (-64.059,-53.015,55.270)
O4': (-65.770,-54.363,54.355)
C8: (-64.964,-57.530,55.480)
O2': (-67.320,-55.855,57.199)
C6: (-64.393,-59.378,52.575)
C5: (-64.694,-58.502,53.629)
C4: (-65.401,-57.340,53.350)
P: (-63.659,-51.270,57.182)
C4': (-65.555,-53.276,55.277)
C2': (-66.235,-55.262,56.510)
C2: (-65.454,-57.863,51.199)
N1: (-64.787,-59.015,51.339)
N3: (-65.819,-56.968,52.118)
N6: (-63.719,-60.528,52.736)
N7: (-64.407,-58.596,54.974)
N9: (-65.559,-56.691,54.576)
O5': (-63.736,-51.693,55.653)
O3': (-67.317,-53.041,57.124)
OP2: (-62.477,-51.873,57.817)
C3': (-66.097,-53.738,56.639)
C1': (-66.298,-55.494,55.005)
C5': (-64.059,-53.015,55.270)
O4': (-65.770,-54.363,54.355)
C8: (-64.964,-57.530,55.480)
O2': (-67.320,-55.855,57.199)
C6: (-64.393,-59.378,52.575)
C5: (-64.694,-58.502,53.629)
C4: (-65.401,-57.340,53.350)
P: (-63.659,-51.270,57.182)
C4': (-65.555,-53.276,55.277)
C2': (-66.235,-55.262,56.510)
C2: (-65.454,-57.863,51.199)
N1: (-64.787,-59.015,51.339)
N3: (-65.819,-56.968,52.118)
N6: (-63.719,-60.528,52.736)
N7: (-64.407,-58.596,54.974)
N9: (-65.559,-56.691,54.576)
O5': (-63.736,-51.693,55.653)
O3': (-67.317,-53.041,57.124)
C4: (-74.670,-60.658,54.113)
N3: (-75.392,-59.697,53.416)
OP1: (-70.120,-57.229,59.227)
OP2: (-70.699,-59.465,58.107)
C2: (-75.226,-58.319,53.453)
C1': (-73.903,-56.431,54.388)
C3': (-74.370,-55.563,56.536)
O5': (-71.843,-57.341,57.382)
O4': (-72.687,-56.286,55.079)
C5': (-71.975,-55.929,57.355)
P: (-70.543,-57.998,58.012)
C4': (-72.886,-55.469,56.252)
C2': (-74.969,-55.633,55.144)
O2': (-75.037,-54.336,54.577)
N1: (-74.216,-57.879,54.294)
O4: (-74.911,-61.872,53.998)
O2: (-75.920,-57.536,52.811)
C6: (-73.443,-58.774,54.996)
C5: (-73.641,-60.096,54.938)
O3': (-74.840,-54.464,57.285)
N3: (-75.392,-59.697,53.416)
OP1: (-70.120,-57.229,59.227)
OP2: (-70.699,-59.465,58.107)
C2: (-75.226,-58.319,53.453)
C1': (-73.903,-56.431,54.388)
C3': (-74.370,-55.563,56.536)
O5': (-71.843,-57.341,57.382)
O4': (-72.687,-56.286,55.079)
C5': (-71.975,-55.929,57.355)
P: (-70.543,-57.998,58.012)
C4': (-72.886,-55.469,56.252)
C2': (-74.969,-55.633,55.144)
O2': (-75.037,-54.336,54.577)
N1: (-74.216,-57.879,54.294)
O4: (-74.911,-61.872,53.998)
O2: (-75.920,-57.536,52.811)
C6: (-73.443,-58.774,54.996)
C5: (-73.641,-60.096,54.938)
O3': (-74.840,-54.464,57.285)
Image (generated by PyMOL):