ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61190:61597

Extra

PDB:
ATOM 1 O3' C A1189 237.228 -41.802 264.340 1.00 74.07 O
ATOM 2 P A A1190 238.639 -42.544 264.131 1.00 66.17 P
ATOM 3 OP1 A A1190 239.569 -41.634 263.404 1.00 65.98 O
ATOM 4 OP2 A A1190 238.349 -43.845 263.551 1.00 66.21 O
ATOM 5 O5' A A1190 239.132 -42.693 265.630 1.00 66.28 O
ATOM 6 C5' A A1190 239.007 -43.908 266.338 1.00 66.42 C
ATOM 7 C4' A A1190 240.298 -44.673 266.327 1.00 66.37 C
ATOM 8 O4' A A1190 240.105 -45.835 267.161 1.00 66.52 O
ATOM 9 C3' A A1190 240.697 -45.177 264.935 1.00 66.25 C
ATOM 10 O3' A A1190 241.977 -44.669 264.422 1.00 66.12 O
ATOM 11 C2' A A1190 240.650 -46.711 265.014 1.00 66.35 C
ATOM 12 O2' A A1190 241.740 -47.383 264.394 1.00 66.31 O
ATOM 13 C1' A A1190 240.573 -46.995 266.519 1.00 66.50 C
ATOM 14 N9 A A1190 239.699 -48.139 266.870 1.00 66.66 N
ATOM 15 C8 A A1190 239.113 -49.015 265.974 1.00 66.69 C
ATOM 16 N7 A A1190 238.481 -50.014 266.510 1.00 66.85 N
ATOM 17 C5 A A1190 238.674 -49.800 267.863 1.00 66.94 C
ATOM 18 C6 A A1190 238.253 -50.506 268.987 1.00 67.13 C
ATOM 19 N6 A A1190 237.542 -51.617 268.888 1.00 67.26 N
ATOM 20 N1 A A1190 238.567 -50.065 270.209 1.00 67.20 N
ATOM 21 C2 A A1190 239.298 -48.967 270.297 1.00 67.09 C
ATOM 22 N3 A A1190 239.772 -48.200 269.321 1.00 66.90 N
ATOM 23 C4 A A1190 239.421 -48.672 268.109 1.00 66.83 C
ATOM 24 P C A1191 243.148 -44.041 265.322 1.00 58.33 P
ATOM 25 OP1 C A1191 244.211 -43.691 264.411 1.00 58.22 O
ATOM 26 OP2 C A1191 243.438 -45.011 266.410 1.00 58.47 O
ATOM 27 O5' C A1191 242.523 -42.732 265.917 1.00 58.33 O
TER

ATOM 1 O3' C B1596 243.704 -49.552 264.750 1.00 61.01 O
ATOM 2 P U B1597 245.052 -49.619 263.893 1.00 55.63 P
ATOM 3 OP1 U B1597 244.867 -48.699 262.735 1.00 55.50 O
ATOM 4 OP2 U B1597 245.317 -51.033 263.626 1.00 55.76 O
ATOM 5 O5' U B1597 246.149 -49.027 264.878 1.00 55.65 O
ATOM 6 C5' U B1597 246.448 -47.640 264.846 1.00 55.55 C
ATOM 7 C4' U B1597 247.329 -47.206 265.986 1.00 55.63 C
ATOM 8 O4' U B1597 247.009 -47.947 267.172 1.00 55.75 O
ATOM 9 C3' U B1597 248.807 -47.419 265.797 1.00 55.72 C
ATOM 10 O3' U B1597 249.379 -46.397 265.015 1.00 55.64 O
ATOM 11 C2' U B1597 249.312 -47.441 267.227 1.00 55.85 C
ATOM 12 O2' U B1597 249.382 -46.125 267.736 1.00 55.82 O
ATOM 13 C1' U B1597 248.166 -48.135 267.940 1.00 55.88 C
ATOM 14 N1 U B1597 248.368 -49.587 268.137 1.00 56.00 N
ATOM 15 C2 U B1597 249.218 -50.067 269.116 1.00 56.17 C
ATOM 16 O2 U B1597 249.896 -49.317 269.779 1.00 56.22 O
ATOM 17 N3 U B1597 249.281 -51.438 269.256 1.00 56.28 N
ATOM 18 C4 U B1597 248.527 -52.364 268.540 1.00 56.25 C
ATOM 19 O4 U B1597 248.614 -53.578 268.730 1.00 56.37 O
ATOM 20 C5 U B1597 247.644 -51.782 267.570 1.00 56.09 C
ATOM 21 C6 U B1597 247.585 -50.451 267.412 1.00 55.98 C
ATOM 22 P U B1598 250.724 -46.636 264.187 1.00 63.80 P
ATOM 23 OP1 U B1598 250.995 -45.393 263.459 1.00 63.70 O
ATOM 24 OP2 U B1598 250.577 -47.879 263.434 1.00 63.86 O
ATOM 25 O5' U B1598 251.803 -46.839 265.307 1.00 63.99 O
TER

Atoms:
OP1: (239.569,-41.634,263.404)
OP2: (238.349,-43.845,263.551)
C3': (240.697,-45.177,264.935)
C1': (240.573,-46.995,266.519)
C5': (239.007,-43.908,266.338)
O4': (240.105,-45.835,267.161)
C8: (239.113,-49.015,265.974)
O2': (241.740,-47.383,264.394)
C6: (238.253,-50.506,268.987)
C5: (238.674,-49.800,267.863)
C4: (239.421,-48.672,268.109)
P: (238.639,-42.544,264.131)
C4': (240.298,-44.673,266.327)
C2': (240.650,-46.711,265.014)
C2: (239.298,-48.967,270.297)
N1: (238.567,-50.065,270.209)
N3: (239.772,-48.200,269.321)
N6: (237.542,-51.617,268.888)
N7: (238.481,-50.014,266.510)
N9: (239.699,-48.139,266.870)
O5': (239.132,-42.693,265.630)
O3': (241.977,-44.669,264.422)
C4: (248.527,-52.364,268.540)
N3: (249.281,-51.438,269.256)
OP1: (244.867,-48.699,262.735)
OP2: (245.317,-51.033,263.626)
C2: (249.218,-50.067,269.116)
C1': (248.166,-48.135,267.940)
C3': (248.807,-47.419,265.797)
O5': (246.149,-49.027,264.878)
O4': (247.009,-47.947,267.172)
C5': (246.448,-47.640,264.846)
P: (245.052,-49.619,263.893)
C4': (247.329,-47.206,265.986)
C2': (249.312,-47.441,267.227)
O2': (249.382,-46.125,267.736)
N1: (248.368,-49.587,268.137)
O4: (248.614,-53.578,268.730)
O2: (249.896,-49.317,269.779)
C6: (247.585,-50.451,267.412)
C5: (247.644,-51.782,267.570)
O3': (249.379,-46.397,265.015)
Image (generated by PyMOL):
PyMOL image
show in jmol