Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1124:A2019
Extra
PDB:
ATOM 1 O3' U A1123 -79.452 -75.641 -22.503 1.00 0.01 O
ATOM 2 P G A1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 3 OP1 G A1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 4 OP2 G A1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 5 O5' G A1124 -80.621 -77.265 -23.975 1.00 0.01 O
ATOM 6 C5' G A1124 -81.867 -77.357 -24.644 1.00 0.01 C
ATOM 7 C4' G A1124 -82.625 -78.561 -24.203 1.00 0.01 C
ATOM 8 O4' G A1124 -81.666 -79.595 -23.977 1.00 0.01 O
ATOM 9 C3' G A1124 -83.383 -78.382 -22.902 1.00 0.01 C
ATOM 10 O3' G A1124 -84.604 -79.112 -22.899 1.00 0.01 O
ATOM 11 C2' G A1124 -82.462 -78.986 -21.873 1.00 0.01 C
ATOM 12 O2' G A1124 -83.138 -79.575 -20.795 1.00 0.01 O
ATOM 13 C1' G A1124 -81.710 -80.033 -22.658 1.00 0.01 C
ATOM 14 N9 G A1124 -80.344 -80.211 -22.187 1.00 0.01 N
ATOM 15 C8 G A1124 -79.546 -79.175 -21.806 1.00 0.01 C
ATOM 16 N7 G A1124 -78.378 -79.534 -21.343 1.00 0.01 N
ATOM 17 C5 G A1124 -78.441 -80.906 -21.423 1.00 0.01 C
ATOM 18 C6 G A1124 -77.452 -81.826 -21.070 1.00 0.01 C
ATOM 19 O6 G A1124 -76.348 -81.575 -20.630 1.00 0.01 O
ATOM 20 N1 G A1124 -77.819 -83.119 -21.284 1.00 0.01 N
ATOM 21 C2 G A1124 -79.031 -83.456 -21.792 1.00 0.01 C
ATOM 22 N2 G A1124 -79.193 -84.777 -21.914 1.00 0.01 N
ATOM 23 N3 G A1124 -79.995 -82.612 -22.148 1.00 0.01 N
ATOM 24 C4 G A1124 -79.631 -81.348 -21.929 1.00 0.01 C
ATOM 25 P U A1125 -85.709 -78.939 -24.047 1.00 0.01 P
ATOM 26 OP1 U A1125 -85.298 -77.806 -24.946 1.00 0.01 O
ATOM 27 OP2 U A1125 -87.009 -78.868 -23.373 1.00 0.01 O
ATOM 28 O5' U A1125 -85.560 -80.318 -24.803 1.00 0.01 O
TER
ATOM 1 O3' C B2018 -81.429 -78.745 -18.039 1.00 0.01 O
ATOM 2 P U B2019 -82.014 -77.584 -17.156 1.00 0.01 P
ATOM 3 OP1 U B2019 -82.087 -76.416 -18.023 1.00 0.01 O
ATOM 4 OP2 U B2019 -81.228 -77.509 -15.924 1.00 0.01 O
ATOM 5 O5' U B2019 -83.459 -78.100 -16.835 1.00 0.01 O
ATOM 6 C5' U B2019 -84.390 -78.296 -17.865 1.00 0.01 C
ATOM 7 C4' U B2019 -85.347 -79.387 -17.517 1.00 0.01 C
ATOM 8 O4' U B2019 -84.631 -80.618 -17.351 1.00 0.01 O
ATOM 9 C3' U B2019 -86.073 -79.238 -16.207 1.00 0.01 C
ATOM 10 O3' U B2019 -87.143 -78.345 -16.270 1.00 0.01 O
ATOM 11 C2' U B2019 -86.493 -80.659 -15.905 1.00 0.01 C
ATOM 12 O2' U B2019 -87.617 -81.031 -16.682 1.00 0.01 O
ATOM 13 C1' U B2019 -85.280 -81.421 -16.398 1.00 0.01 C
ATOM 14 N1 U B2019 -84.343 -81.699 -15.323 1.00 0.01 N
ATOM 15 C2 U B2019 -84.712 -82.635 -14.441 1.00 0.01 C
ATOM 16 O2 U B2019 -85.765 -83.175 -14.553 1.00 0.01 O
ATOM 17 N3 U B2019 -83.824 -82.894 -13.457 1.00 0.01 N
ATOM 18 C4 U B2019 -82.607 -82.314 -13.278 1.00 0.01 C
ATOM 19 O4 U B2019 -81.903 -82.653 -12.354 1.00 0.01 O
ATOM 20 C5 U B2019 -82.268 -81.355 -14.242 1.00 0.01 C
ATOM 21 C6 U B2019 -83.135 -81.091 -15.216 1.00 0.01 C
ATOM 22 P G B2020 -87.500 -77.486 -14.995 1.00 0.01 P
ATOM 23 OP1 G B2020 -88.630 -76.623 -15.368 1.00 0.01 O
ATOM 24 OP2 G B2020 -86.261 -76.862 -14.535 1.00 0.01 O
ATOM 25 O5' G B2020 -87.968 -78.581 -13.965 1.00 0.01 O
TER
ATOM 2 P G A1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 3 OP1 G A1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 4 OP2 G A1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 5 O5' G A1124 -80.621 -77.265 -23.975 1.00 0.01 O
ATOM 6 C5' G A1124 -81.867 -77.357 -24.644 1.00 0.01 C
ATOM 7 C4' G A1124 -82.625 -78.561 -24.203 1.00 0.01 C
ATOM 8 O4' G A1124 -81.666 -79.595 -23.977 1.00 0.01 O
ATOM 9 C3' G A1124 -83.383 -78.382 -22.902 1.00 0.01 C
ATOM 10 O3' G A1124 -84.604 -79.112 -22.899 1.00 0.01 O
ATOM 11 C2' G A1124 -82.462 -78.986 -21.873 1.00 0.01 C
ATOM 12 O2' G A1124 -83.138 -79.575 -20.795 1.00 0.01 O
ATOM 13 C1' G A1124 -81.710 -80.033 -22.658 1.00 0.01 C
ATOM 14 N9 G A1124 -80.344 -80.211 -22.187 1.00 0.01 N
ATOM 15 C8 G A1124 -79.546 -79.175 -21.806 1.00 0.01 C
ATOM 16 N7 G A1124 -78.378 -79.534 -21.343 1.00 0.01 N
ATOM 17 C5 G A1124 -78.441 -80.906 -21.423 1.00 0.01 C
ATOM 18 C6 G A1124 -77.452 -81.826 -21.070 1.00 0.01 C
ATOM 19 O6 G A1124 -76.348 -81.575 -20.630 1.00 0.01 O
ATOM 20 N1 G A1124 -77.819 -83.119 -21.284 1.00 0.01 N
ATOM 21 C2 G A1124 -79.031 -83.456 -21.792 1.00 0.01 C
ATOM 22 N2 G A1124 -79.193 -84.777 -21.914 1.00 0.01 N
ATOM 23 N3 G A1124 -79.995 -82.612 -22.148 1.00 0.01 N
ATOM 24 C4 G A1124 -79.631 -81.348 -21.929 1.00 0.01 C
ATOM 25 P U A1125 -85.709 -78.939 -24.047 1.00 0.01 P
ATOM 26 OP1 U A1125 -85.298 -77.806 -24.946 1.00 0.01 O
ATOM 27 OP2 U A1125 -87.009 -78.868 -23.373 1.00 0.01 O
ATOM 28 O5' U A1125 -85.560 -80.318 -24.803 1.00 0.01 O
TER
ATOM 1 O3' C B2018 -81.429 -78.745 -18.039 1.00 0.01 O
ATOM 2 P U B2019 -82.014 -77.584 -17.156 1.00 0.01 P
ATOM 3 OP1 U B2019 -82.087 -76.416 -18.023 1.00 0.01 O
ATOM 4 OP2 U B2019 -81.228 -77.509 -15.924 1.00 0.01 O
ATOM 5 O5' U B2019 -83.459 -78.100 -16.835 1.00 0.01 O
ATOM 6 C5' U B2019 -84.390 -78.296 -17.865 1.00 0.01 C
ATOM 7 C4' U B2019 -85.347 -79.387 -17.517 1.00 0.01 C
ATOM 8 O4' U B2019 -84.631 -80.618 -17.351 1.00 0.01 O
ATOM 9 C3' U B2019 -86.073 -79.238 -16.207 1.00 0.01 C
ATOM 10 O3' U B2019 -87.143 -78.345 -16.270 1.00 0.01 O
ATOM 11 C2' U B2019 -86.493 -80.659 -15.905 1.00 0.01 C
ATOM 12 O2' U B2019 -87.617 -81.031 -16.682 1.00 0.01 O
ATOM 13 C1' U B2019 -85.280 -81.421 -16.398 1.00 0.01 C
ATOM 14 N1 U B2019 -84.343 -81.699 -15.323 1.00 0.01 N
ATOM 15 C2 U B2019 -84.712 -82.635 -14.441 1.00 0.01 C
ATOM 16 O2 U B2019 -85.765 -83.175 -14.553 1.00 0.01 O
ATOM 17 N3 U B2019 -83.824 -82.894 -13.457 1.00 0.01 N
ATOM 18 C4 U B2019 -82.607 -82.314 -13.278 1.00 0.01 C
ATOM 19 O4 U B2019 -81.903 -82.653 -12.354 1.00 0.01 O
ATOM 20 C5 U B2019 -82.268 -81.355 -14.242 1.00 0.01 C
ATOM 21 C6 U B2019 -83.135 -81.091 -15.216 1.00 0.01 C
ATOM 22 P G B2020 -87.500 -77.486 -14.995 1.00 0.01 P
ATOM 23 OP1 G B2020 -88.630 -76.623 -15.368 1.00 0.01 O
ATOM 24 OP2 G B2020 -86.261 -76.862 -14.535 1.00 0.01 O
ATOM 25 O5' G B2020 -87.968 -78.581 -13.965 1.00 0.01 O
TER
Atoms:
OP1: (-78.522,-76.190,-24.685)
OP2: (-80.604,-74.840,-24.524)
C3': (-83.383,-78.382,-22.902)
C1': (-81.710,-80.033,-22.658)
C5': (-81.867,-77.357,-24.644)
O6: (-76.348,-81.575,-20.630)
O4': (-81.666,-79.595,-23.977)
C8: (-79.546,-79.175,-21.806)
C2: (-79.031,-83.456,-21.792)
C6: (-77.452,-81.826,-21.070)
C5: (-78.441,-80.906,-21.423)
C4: (-79.631,-81.348,-21.929)
P: (-79.777,-75.933,-24.039)
C4': (-82.625,-78.561,-24.203)
C2': (-82.462,-78.986,-21.873)
O2': (-83.138,-79.575,-20.795)
N1: (-77.819,-83.119,-21.284)
N2: (-79.193,-84.777,-21.914)
N3: (-79.995,-82.612,-22.148)
N7: (-78.378,-79.534,-21.343)
N9: (-80.344,-80.211,-22.187)
O5': (-80.621,-77.265,-23.975)
O3': (-84.604,-79.112,-22.899)
OP2: (-80.604,-74.840,-24.524)
C3': (-83.383,-78.382,-22.902)
C1': (-81.710,-80.033,-22.658)
C5': (-81.867,-77.357,-24.644)
O6: (-76.348,-81.575,-20.630)
O4': (-81.666,-79.595,-23.977)
C8: (-79.546,-79.175,-21.806)
C2: (-79.031,-83.456,-21.792)
C6: (-77.452,-81.826,-21.070)
C5: (-78.441,-80.906,-21.423)
C4: (-79.631,-81.348,-21.929)
P: (-79.777,-75.933,-24.039)
C4': (-82.625,-78.561,-24.203)
C2': (-82.462,-78.986,-21.873)
O2': (-83.138,-79.575,-20.795)
N1: (-77.819,-83.119,-21.284)
N2: (-79.193,-84.777,-21.914)
N3: (-79.995,-82.612,-22.148)
N7: (-78.378,-79.534,-21.343)
N9: (-80.344,-80.211,-22.187)
O5': (-80.621,-77.265,-23.975)
O3': (-84.604,-79.112,-22.899)
C4: (-82.607,-82.314,-13.278)
N3: (-83.824,-82.894,-13.457)
OP1: (-82.087,-76.416,-18.023)
OP2: (-81.228,-77.509,-15.924)
C2: (-84.712,-82.635,-14.441)
C1': (-85.280,-81.421,-16.398)
C3': (-86.073,-79.238,-16.207)
O5': (-83.459,-78.100,-16.835)
O4': (-84.631,-80.618,-17.351)
C5': (-84.390,-78.296,-17.865)
P: (-82.014,-77.584,-17.156)
C4': (-85.347,-79.387,-17.517)
C2': (-86.493,-80.659,-15.905)
O2': (-87.617,-81.031,-16.682)
N1: (-84.343,-81.699,-15.323)
O4: (-81.903,-82.653,-12.354)
O2: (-85.765,-83.175,-14.553)
C6: (-83.135,-81.091,-15.216)
C5: (-82.268,-81.355,-14.242)
O3': (-87.143,-78.345,-16.270)
N3: (-83.824,-82.894,-13.457)
OP1: (-82.087,-76.416,-18.023)
OP2: (-81.228,-77.509,-15.924)
C2: (-84.712,-82.635,-14.441)
C1': (-85.280,-81.421,-16.398)
C3': (-86.073,-79.238,-16.207)
O5': (-83.459,-78.100,-16.835)
O4': (-84.631,-80.618,-17.351)
C5': (-84.390,-78.296,-17.865)
P: (-82.014,-77.584,-17.156)
C4': (-85.347,-79.387,-17.517)
C2': (-86.493,-80.659,-15.905)
O2': (-87.617,-81.031,-16.682)
N1: (-84.343,-81.699,-15.323)
O4: (-81.903,-82.653,-12.354)
O2: (-85.765,-83.175,-14.553)
C6: (-83.135,-81.091,-15.216)
C5: (-82.268,-81.355,-14.242)
O3': (-87.143,-78.345,-16.270)
Image (generated by PyMOL):