Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1124:A2018
Extra
PDB:
ATOM 1 O3' U A1123 -56.832 101.774 180.459 1.00 0.01 O
ATOM 2 P G A1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 3 OP1 G A1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 4 OP2 G A1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 5 O5' G A1124 -58.874 101.163 181.771 1.00 0.01 O
ATOM 6 C5' G A1124 -60.099 100.469 181.902 1.00 0.01 C
ATOM 7 C4' G A1124 -60.985 101.149 182.886 1.00 0.01 C
ATOM 8 O4' G A1124 -60.221 101.395 184.092 1.00 0.01 O
ATOM 9 C3' G A1124 -61.494 102.494 182.435 1.00 0.01 C
ATOM 10 O3' G A1124 -62.787 102.713 182.969 1.00 0.01 O
ATOM 11 C2' G A1124 -60.502 103.465 183.055 1.00 0.01 C
ATOM 12 O2' G A1124 -61.019 104.751 183.285 1.00 0.01 O
ATOM 13 C1' G A1124 -60.138 102.770 184.349 1.00 0.01 C
ATOM 14 N9 G A1124 -58.783 103.054 184.796 1.00 0.01 N
ATOM 15 C8 G A1124 -57.671 103.223 184.017 1.00 0.01 C
ATOM 16 N7 G A1124 -56.582 103.483 184.695 1.00 0.01 N
ATOM 17 C5 G A1124 -57.024 103.482 185.998 1.00 0.01 C
ATOM 18 C6 G A1124 -56.312 103.704 187.172 1.00 0.01 C
ATOM 19 O6 G A1124 -55.120 103.932 187.308 1.00 0.01 O
ATOM 20 N1 G A1124 -57.142 103.623 188.259 1.00 0.01 N
ATOM 21 C2 G A1124 -58.474 103.340 188.192 1.00 0.01 C
ATOM 22 N2 G A1124 -59.148 103.277 189.331 1.00 0.01 N
ATOM 23 N3 G A1124 -59.149 103.133 187.111 1.00 0.01 N
ATOM 24 C4 G A1124 -58.360 103.217 186.065 1.00 0.01 C
ATOM 25 P U A1125 -64.036 101.866 182.422 1.00 1.64 P
ATOM 26 OP1 U A1125 -63.597 101.145 181.198 1.00 1.64 O
ATOM 27 OP2 U A1125 -65.185 102.799 182.322 1.00 1.64 O
ATOM 28 O5' U A1125 -64.283 100.827 183.590 1.00 1.64 O
TER
ATOM 1 O3' C B2017 -58.972 106.949 182.855 1.00 0.01 O
ATOM 2 P U B2018 -59.088 107.881 181.566 1.00 0.01 P
ATOM 3 OP1 U B2018 -58.905 107.012 180.401 1.00 0.01 O
ATOM 4 OP2 U B2018 -58.162 109.021 181.749 1.00 0.01 O
ATOM 5 O5' U B2018 -60.574 108.401 181.634 1.00 0.01 O
ATOM 6 C5' U B2018 -61.631 107.506 181.794 1.00 0.01 C
ATOM 7 C4' U B2018 -62.705 108.100 182.630 1.00 0.01 C
ATOM 8 O4' U B2018 -62.186 108.392 183.936 1.00 0.01 O
ATOM 9 C3' U B2018 -63.223 109.441 182.198 1.00 0.01 C
ATOM 10 O3' U B2018 -64.044 109.402 181.068 1.00 0.01 O
ATOM 11 C2' U B2018 -63.930 109.901 183.450 1.00 0.01 C
ATOM 12 O2' U B2018 -65.147 109.193 183.638 1.00 0.01 O
ATOM 13 C1' U B2018 -62.936 109.444 184.503 1.00 0.01 C
ATOM 14 N1 U B2018 -62.040 110.518 184.871 1.00 0.01 N
ATOM 15 C2 U B2018 -62.669 111.544 185.501 1.00 0.01 C
ATOM 16 O2 U B2018 -63.855 111.481 185.713 1.00 0.01 O
ATOM 17 N3 U B2018 -61.886 112.595 185.858 1.00 0.01 N
ATOM 18 C4 U B2018 -60.532 112.693 185.629 1.00 0.01 C
ATOM 19 O4 U B2018 -59.913 113.694 185.992 1.00 0.01 O
ATOM 20 C5 U B2018 -59.950 111.564 184.961 1.00 0.01 C
ATOM 21 C6 U B2018 -60.718 110.529 184.601 1.00 0.01 C
ATOM 22 P G B2019 -63.880 110.541 179.949 1.00 0.01 P
ATOM 23 OP1 G B2019 -64.776 110.170 178.837 1.00 0.01 O
ATOM 24 OP2 G B2019 -62.418 110.710 179.681 1.00 0.01 O
ATOM 25 O5' G B2019 -64.425 111.836 180.677 1.00 0.01 O
TER
ATOM 2 P G A1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 3 OP1 G A1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 4 OP2 G A1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 5 O5' G A1124 -58.874 101.163 181.771 1.00 0.01 O
ATOM 6 C5' G A1124 -60.099 100.469 181.902 1.00 0.01 C
ATOM 7 C4' G A1124 -60.985 101.149 182.886 1.00 0.01 C
ATOM 8 O4' G A1124 -60.221 101.395 184.092 1.00 0.01 O
ATOM 9 C3' G A1124 -61.494 102.494 182.435 1.00 0.01 C
ATOM 10 O3' G A1124 -62.787 102.713 182.969 1.00 0.01 O
ATOM 11 C2' G A1124 -60.502 103.465 183.055 1.00 0.01 C
ATOM 12 O2' G A1124 -61.019 104.751 183.285 1.00 0.01 O
ATOM 13 C1' G A1124 -60.138 102.770 184.349 1.00 0.01 C
ATOM 14 N9 G A1124 -58.783 103.054 184.796 1.00 0.01 N
ATOM 15 C8 G A1124 -57.671 103.223 184.017 1.00 0.01 C
ATOM 16 N7 G A1124 -56.582 103.483 184.695 1.00 0.01 N
ATOM 17 C5 G A1124 -57.024 103.482 185.998 1.00 0.01 C
ATOM 18 C6 G A1124 -56.312 103.704 187.172 1.00 0.01 C
ATOM 19 O6 G A1124 -55.120 103.932 187.308 1.00 0.01 O
ATOM 20 N1 G A1124 -57.142 103.623 188.259 1.00 0.01 N
ATOM 21 C2 G A1124 -58.474 103.340 188.192 1.00 0.01 C
ATOM 22 N2 G A1124 -59.148 103.277 189.331 1.00 0.01 N
ATOM 23 N3 G A1124 -59.149 103.133 187.111 1.00 0.01 N
ATOM 24 C4 G A1124 -58.360 103.217 186.065 1.00 0.01 C
ATOM 25 P U A1125 -64.036 101.866 182.422 1.00 1.64 P
ATOM 26 OP1 U A1125 -63.597 101.145 181.198 1.00 1.64 O
ATOM 27 OP2 U A1125 -65.185 102.799 182.322 1.00 1.64 O
ATOM 28 O5' U A1125 -64.283 100.827 183.590 1.00 1.64 O
TER
ATOM 1 O3' C B2017 -58.972 106.949 182.855 1.00 0.01 O
ATOM 2 P U B2018 -59.088 107.881 181.566 1.00 0.01 P
ATOM 3 OP1 U B2018 -58.905 107.012 180.401 1.00 0.01 O
ATOM 4 OP2 U B2018 -58.162 109.021 181.749 1.00 0.01 O
ATOM 5 O5' U B2018 -60.574 108.401 181.634 1.00 0.01 O
ATOM 6 C5' U B2018 -61.631 107.506 181.794 1.00 0.01 C
ATOM 7 C4' U B2018 -62.705 108.100 182.630 1.00 0.01 C
ATOM 8 O4' U B2018 -62.186 108.392 183.936 1.00 0.01 O
ATOM 9 C3' U B2018 -63.223 109.441 182.198 1.00 0.01 C
ATOM 10 O3' U B2018 -64.044 109.402 181.068 1.00 0.01 O
ATOM 11 C2' U B2018 -63.930 109.901 183.450 1.00 0.01 C
ATOM 12 O2' U B2018 -65.147 109.193 183.638 1.00 0.01 O
ATOM 13 C1' U B2018 -62.936 109.444 184.503 1.00 0.01 C
ATOM 14 N1 U B2018 -62.040 110.518 184.871 1.00 0.01 N
ATOM 15 C2 U B2018 -62.669 111.544 185.501 1.00 0.01 C
ATOM 16 O2 U B2018 -63.855 111.481 185.713 1.00 0.01 O
ATOM 17 N3 U B2018 -61.886 112.595 185.858 1.00 0.01 N
ATOM 18 C4 U B2018 -60.532 112.693 185.629 1.00 0.01 C
ATOM 19 O4 U B2018 -59.913 113.694 185.992 1.00 0.01 O
ATOM 20 C5 U B2018 -59.950 111.564 184.961 1.00 0.01 C
ATOM 21 C6 U B2018 -60.718 110.529 184.601 1.00 0.01 C
ATOM 22 P G B2019 -63.880 110.541 179.949 1.00 0.01 P
ATOM 23 OP1 G B2019 -64.776 110.170 178.837 1.00 0.01 O
ATOM 24 OP2 G B2019 -62.418 110.710 179.681 1.00 0.01 O
ATOM 25 O5' G B2019 -64.425 111.836 180.677 1.00 0.01 O
TER
Atoms:
OP1: (-56.822,99.776,181.902)
OP2: (-58.200,99.813,179.789)
C3': (-61.494,102.494,182.435)
C1': (-60.138,102.770,184.349)
C5': (-60.099,100.469,181.902)
O6: (-55.120,103.932,187.308)
O4': (-60.221,101.395,184.092)
C8: (-57.671,103.223,184.017)
C2: (-58.474,103.340,188.192)
C6: (-56.312,103.704,187.172)
C5: (-57.024,103.482,185.998)
C4: (-58.360,103.217,186.065)
P: (-57.676,100.509,180.979)
C4': (-60.985,101.149,182.886)
C2': (-60.502,103.465,183.055)
O2': (-61.019,104.751,183.285)
N1: (-57.142,103.623,188.259)
N2: (-59.148,103.277,189.331)
N3: (-59.149,103.133,187.111)
N7: (-56.582,103.483,184.695)
N9: (-58.783,103.054,184.796)
O5': (-58.874,101.163,181.771)
O3': (-62.787,102.713,182.969)
OP2: (-58.200,99.813,179.789)
C3': (-61.494,102.494,182.435)
C1': (-60.138,102.770,184.349)
C5': (-60.099,100.469,181.902)
O6: (-55.120,103.932,187.308)
O4': (-60.221,101.395,184.092)
C8: (-57.671,103.223,184.017)
C2: (-58.474,103.340,188.192)
C6: (-56.312,103.704,187.172)
C5: (-57.024,103.482,185.998)
C4: (-58.360,103.217,186.065)
P: (-57.676,100.509,180.979)
C4': (-60.985,101.149,182.886)
C2': (-60.502,103.465,183.055)
O2': (-61.019,104.751,183.285)
N1: (-57.142,103.623,188.259)
N2: (-59.148,103.277,189.331)
N3: (-59.149,103.133,187.111)
N7: (-56.582,103.483,184.695)
N9: (-58.783,103.054,184.796)
O5': (-58.874,101.163,181.771)
O3': (-62.787,102.713,182.969)
C4: (-60.532,112.693,185.629)
N3: (-61.886,112.595,185.858)
OP1: (-58.905,107.012,180.401)
OP2: (-58.162,109.021,181.749)
C2: (-62.669,111.544,185.501)
C1': (-62.936,109.444,184.503)
C3': (-63.223,109.441,182.198)
O5': (-60.574,108.401,181.634)
O4': (-62.186,108.392,183.936)
C5': (-61.631,107.506,181.794)
P: (-59.088,107.881,181.566)
C4': (-62.705,108.100,182.630)
C2': (-63.930,109.901,183.450)
O2': (-65.147,109.193,183.638)
N1: (-62.040,110.518,184.871)
O4: (-59.913,113.694,185.992)
O2: (-63.855,111.481,185.713)
C6: (-60.718,110.529,184.601)
C5: (-59.950,111.564,184.961)
O3': (-64.044,109.402,181.068)
N3: (-61.886,112.595,185.858)
OP1: (-58.905,107.012,180.401)
OP2: (-58.162,109.021,181.749)
C2: (-62.669,111.544,185.501)
C1': (-62.936,109.444,184.503)
C3': (-63.223,109.441,182.198)
O5': (-60.574,108.401,181.634)
O4': (-62.186,108.392,183.936)
C5': (-61.631,107.506,181.794)
P: (-59.088,107.881,181.566)
C4': (-62.705,108.100,182.630)
C2': (-63.930,109.901,183.450)
O2': (-65.147,109.193,183.638)
N1: (-62.040,110.518,184.871)
O4: (-59.913,113.694,185.992)
O2: (-63.855,111.481,185.713)
C6: (-60.718,110.529,184.601)
C5: (-59.950,111.564,184.961)
O3': (-64.044,109.402,181.068)
Image (generated by PyMOL):