Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M8V:S4:S3
Extra
PDB:
ATOM 1 O3' U A 3 1.527 25.015 12.638 1.00 87.37 O
ATOM 2 P U A 4 2.209 23.687 13.292 0.92 97.27 P
ATOM 3 OP1 U A 4 1.387 22.464 13.132 1.00 91.39 O
ATOM 4 OP2 U A 4 2.685 24.064 14.646 0.35 98.37 O
ATOM 5 O5' U A 4 3.531 23.468 12.441 0.81 96.15 O
ATOM 6 C5' U A 4 3.567 22.514 11.370 1.00 89.00 C
ATOM 7 C4' U A 4 4.315 23.092 10.199 0.77 85.16 C
ATOM 8 O4' U A 4 3.492 24.088 9.548 1.00 77.76 O
ATOM 9 C3' U A 4 5.556 23.870 10.599 1.00 83.86 C
ATOM 10 O3' U A 4 6.655 22.991 10.795 0.90 89.96 O
ATOM 11 C2' U A 4 5.771 24.770 9.389 1.00 79.87 C
ATOM 12 O2' U A 4 6.390 24.061 8.332 1.00 71.99 O
ATOM 13 C1' U A 4 4.325 25.087 8.988 1.00 74.08 C
ATOM 14 N1 U A 4 3.799 26.405 9.376 1.00 65.50 N
ATOM 15 C2 U A 4 4.426 27.526 8.863 1.00 63.47 C
ATOM 16 O2 U A 4 5.421 27.470 8.167 0.85 68.33 O
ATOM 17 N3 U A 4 3.847 28.720 9.200 1.00 64.42 N
ATOM 18 C4 U A 4 2.738 28.911 9.993 1.00 63.94 C
ATOM 19 O4 U A 4 2.300 30.053 10.153 0.90 65.06 O
ATOM 20 C5 U A 4 2.166 27.706 10.520 1.00 65.75 C
ATOM 21 C6 U A 4 2.704 26.523 10.200 1.00 67.28 C
ATOM 22 P U A 5 7.083 22.549 12.284 1.00 92.87 P
ATOM 23 OP1 U A 5 5.969 22.856 13.221 0.34 95.54 O
ATOM 24 OP2 U A 5 8.437 23.131 12.534 0.94 93.76 O
ATOM 25 O5' U A 5 7.232 20.961 12.167 0.95 93.03 O
TER
ATOM 1 O3' U B 2 -1.116 28.624 14.463 0.01100.38 O
ATOM 2 P U B 3 -1.978 28.351 13.126 1.00 97.32 P
ATOM 3 OP1 U B 3 -1.282 28.968 11.975 1.00 96.50 O
ATOM 4 OP2 U B 3 -3.397 28.716 13.409 0.40 97.67 O
ATOM 5 O5' U B 3 -1.918 26.774 12.944 1.00 82.96 O
ATOM 6 C5' U B 3 -1.320 25.916 13.940 1.00 80.91 C
ATOM 7 C4' U B 3 -0.814 24.668 13.271 1.00 77.51 C
ATOM 8 O4' U B 3 -1.946 24.028 12.631 0.91 75.39 O
ATOM 9 C3' U B 3 0.172 24.974 12.145 0.82 80.40 C
ATOM 10 O3' U B 3 1.527 25.015 12.638 1.00 87.37 O
ATOM 11 C2' U B 3 -0.106 23.918 11.068 1.00 71.51 C
ATOM 12 O2' U B 3 0.712 22.766 11.062 0.76 71.01 O
ATOM 13 C1' U B 3 -1.547 23.503 11.381 0.50 65.77 C
ATOM 14 N1 U B 3 -2.597 23.769 10.388 1.00 47.25 N
ATOM 15 C2 U B 3 -3.147 22.663 9.776 1.00 41.28 C
ATOM 16 O2 U B 3 -2.769 21.528 10.018 0.97 32.85 O
ATOM 17 N3 U B 3 -4.145 22.929 8.876 1.00 32.78 N
ATOM 18 C4 U B 3 -4.634 24.159 8.527 1.00 33.68 C
ATOM 19 O4 U B 3 -5.515 24.229 7.675 1.00 26.71 O
ATOM 20 C5 U B 3 -4.010 25.265 9.199 0.93 37.26 C
ATOM 21 C6 U B 3 -3.031 25.034 10.087 1.00 35.46 C
ATOM 22 P U B 4 2.209 23.687 13.292 0.92 97.27 P
ATOM 23 OP1 U B 4 1.387 22.464 13.132 1.00 91.39 O
ATOM 24 OP2 U B 4 2.685 24.064 14.646 0.35 98.37 O
ATOM 25 O5' U B 4 3.531 23.468 12.441 0.81 96.15 O
TER
ATOM 2 P U A 4 2.209 23.687 13.292 0.92 97.27 P
ATOM 3 OP1 U A 4 1.387 22.464 13.132 1.00 91.39 O
ATOM 4 OP2 U A 4 2.685 24.064 14.646 0.35 98.37 O
ATOM 5 O5' U A 4 3.531 23.468 12.441 0.81 96.15 O
ATOM 6 C5' U A 4 3.567 22.514 11.370 1.00 89.00 C
ATOM 7 C4' U A 4 4.315 23.092 10.199 0.77 85.16 C
ATOM 8 O4' U A 4 3.492 24.088 9.548 1.00 77.76 O
ATOM 9 C3' U A 4 5.556 23.870 10.599 1.00 83.86 C
ATOM 10 O3' U A 4 6.655 22.991 10.795 0.90 89.96 O
ATOM 11 C2' U A 4 5.771 24.770 9.389 1.00 79.87 C
ATOM 12 O2' U A 4 6.390 24.061 8.332 1.00 71.99 O
ATOM 13 C1' U A 4 4.325 25.087 8.988 1.00 74.08 C
ATOM 14 N1 U A 4 3.799 26.405 9.376 1.00 65.50 N
ATOM 15 C2 U A 4 4.426 27.526 8.863 1.00 63.47 C
ATOM 16 O2 U A 4 5.421 27.470 8.167 0.85 68.33 O
ATOM 17 N3 U A 4 3.847 28.720 9.200 1.00 64.42 N
ATOM 18 C4 U A 4 2.738 28.911 9.993 1.00 63.94 C
ATOM 19 O4 U A 4 2.300 30.053 10.153 0.90 65.06 O
ATOM 20 C5 U A 4 2.166 27.706 10.520 1.00 65.75 C
ATOM 21 C6 U A 4 2.704 26.523 10.200 1.00 67.28 C
ATOM 22 P U A 5 7.083 22.549 12.284 1.00 92.87 P
ATOM 23 OP1 U A 5 5.969 22.856 13.221 0.34 95.54 O
ATOM 24 OP2 U A 5 8.437 23.131 12.534 0.94 93.76 O
ATOM 25 O5' U A 5 7.232 20.961 12.167 0.95 93.03 O
TER
ATOM 1 O3' U B 2 -1.116 28.624 14.463 0.01100.38 O
ATOM 2 P U B 3 -1.978 28.351 13.126 1.00 97.32 P
ATOM 3 OP1 U B 3 -1.282 28.968 11.975 1.00 96.50 O
ATOM 4 OP2 U B 3 -3.397 28.716 13.409 0.40 97.67 O
ATOM 5 O5' U B 3 -1.918 26.774 12.944 1.00 82.96 O
ATOM 6 C5' U B 3 -1.320 25.916 13.940 1.00 80.91 C
ATOM 7 C4' U B 3 -0.814 24.668 13.271 1.00 77.51 C
ATOM 8 O4' U B 3 -1.946 24.028 12.631 0.91 75.39 O
ATOM 9 C3' U B 3 0.172 24.974 12.145 0.82 80.40 C
ATOM 10 O3' U B 3 1.527 25.015 12.638 1.00 87.37 O
ATOM 11 C2' U B 3 -0.106 23.918 11.068 1.00 71.51 C
ATOM 12 O2' U B 3 0.712 22.766 11.062 0.76 71.01 O
ATOM 13 C1' U B 3 -1.547 23.503 11.381 0.50 65.77 C
ATOM 14 N1 U B 3 -2.597 23.769 10.388 1.00 47.25 N
ATOM 15 C2 U B 3 -3.147 22.663 9.776 1.00 41.28 C
ATOM 16 O2 U B 3 -2.769 21.528 10.018 0.97 32.85 O
ATOM 17 N3 U B 3 -4.145 22.929 8.876 1.00 32.78 N
ATOM 18 C4 U B 3 -4.634 24.159 8.527 1.00 33.68 C
ATOM 19 O4 U B 3 -5.515 24.229 7.675 1.00 26.71 O
ATOM 20 C5 U B 3 -4.010 25.265 9.199 0.93 37.26 C
ATOM 21 C6 U B 3 -3.031 25.034 10.087 1.00 35.46 C
ATOM 22 P U B 4 2.209 23.687 13.292 0.92 97.27 P
ATOM 23 OP1 U B 4 1.387 22.464 13.132 1.00 91.39 O
ATOM 24 OP2 U B 4 2.685 24.064 14.646 0.35 98.37 O
ATOM 25 O5' U B 4 3.531 23.468 12.441 0.81 96.15 O
TER
Atoms:
C4: (2.738,28.911,9.993)
N3: (3.847,28.720,9.200)
OP1: (1.387,22.464,13.132)
OP2: (2.685,24.064,14.646)
C2: (4.426,27.526,8.863)
C1': (4.325,25.087,8.988)
C3': (5.556,23.870,10.599)
O5': (3.531,23.468,12.441)
O4': (3.492,24.088,9.548)
C5': (3.567,22.514,11.370)
P: (2.209,23.687,13.292)
C4': (4.315,23.092,10.199)
C2': (5.771,24.770,9.389)
O2': (6.390,24.061,8.332)
N1: (3.799,26.405,9.376)
O4: (2.300,30.053,10.153)
O2: (5.421,27.470,8.167)
C6: (2.704,26.523,10.200)
C5: (2.166,27.706,10.520)
O3': (6.655,22.991,10.795)
N3: (3.847,28.720,9.200)
OP1: (1.387,22.464,13.132)
OP2: (2.685,24.064,14.646)
C2: (4.426,27.526,8.863)
C1': (4.325,25.087,8.988)
C3': (5.556,23.870,10.599)
O5': (3.531,23.468,12.441)
O4': (3.492,24.088,9.548)
C5': (3.567,22.514,11.370)
P: (2.209,23.687,13.292)
C4': (4.315,23.092,10.199)
C2': (5.771,24.770,9.389)
O2': (6.390,24.061,8.332)
N1: (3.799,26.405,9.376)
O4: (2.300,30.053,10.153)
O2: (5.421,27.470,8.167)
C6: (2.704,26.523,10.200)
C5: (2.166,27.706,10.520)
O3': (6.655,22.991,10.795)
C4: (-4.634,24.159,8.527)
N3: (-4.145,22.929,8.876)
OP1: (-1.282,28.968,11.975)
OP2: (-3.397,28.716,13.409)
C2: (-3.147,22.663,9.776)
C1': (-1.547,23.503,11.381)
C3': (0.172,24.974,12.145)
O5': (-1.918,26.774,12.944)
O4': (-1.946,24.028,12.631)
C5': (-1.320,25.916,13.940)
P: (-1.978,28.351,13.126)
C4': (-0.814,24.668,13.271)
C2': (-0.106,23.918,11.068)
O2': (0.712,22.766,11.062)
N1: (-2.597,23.769,10.388)
O4: (-5.515,24.229,7.675)
O2: (-2.769,21.528,10.018)
C6: (-3.031,25.034,10.087)
C5: (-4.010,25.265,9.199)
O3': (1.527,25.015,12.638)
N3: (-4.145,22.929,8.876)
OP1: (-1.282,28.968,11.975)
OP2: (-3.397,28.716,13.409)
C2: (-3.147,22.663,9.776)
C1': (-1.547,23.503,11.381)
C3': (0.172,24.974,12.145)
O5': (-1.918,26.774,12.944)
O4': (-1.946,24.028,12.631)
C5': (-1.320,25.916,13.940)
P: (-1.978,28.351,13.126)
C4': (-0.814,24.668,13.271)
C2': (-0.106,23.918,11.068)
O2': (0.712,22.766,11.062)
N1: (-2.597,23.769,10.388)
O4: (-5.515,24.229,7.675)
O2: (-2.769,21.528,10.018)
C6: (-3.031,25.034,10.087)
C5: (-4.010,25.265,9.199)
O3': (1.527,25.015,12.638)
Image (generated by PyMOL):