Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDS:D6:D5
Extra
PDB:
ATOM 1 O3' U A 5 12.189 0.647 86.916 1.00 30.85 O
ATOM 2 P U A 6 12.027 2.039 87.706 1.00 30.25 P
ATOM 3 OP1 U A 6 11.408 3.006 86.767 1.00 31.38 O
ATOM 4 OP2 U A 6 13.326 2.364 88.344 1.00 33.53 O
ATOM 5 O5' U A 6 10.967 1.717 88.849 1.00 29.50 O
ATOM 6 C5' U A 6 9.610 1.441 88.517 1.00 27.10 C
ATOM 7 C4' U A 6 8.753 1.450 89.757 1.00 25.48 C
ATOM 8 O4' U A 6 9.192 0.396 90.652 1.00 26.03 O
ATOM 9 C3' U A 6 8.817 2.705 90.617 1.00 26.31 C
ATOM 10 O3' U A 6 7.925 3.699 90.128 1.00 30.81 O
ATOM 11 C2' U A 6 8.315 2.180 91.953 1.00 23.35 C
ATOM 12 O2' U A 6 6.905 2.068 91.981 1.00 24.89 O
ATOM 13 C1' U A 6 8.942 0.784 91.989 1.00 24.37 C
ATOM 14 N1 U A 6 10.208 0.729 92.735 1.00 25.02 N
ATOM 15 C2 U A 6 10.143 0.852 94.105 1.00 23.98 C
ATOM 16 O2 U A 6 9.096 1.013 94.703 1.00 27.20 O
ATOM 17 N3 U A 6 11.352 0.779 94.755 1.00 25.46 N
ATOM 18 C4 U A 6 12.592 0.602 94.179 1.00 28.30 C
ATOM 19 O4 U A 6 13.590 0.554 94.898 1.00 27.65 O
ATOM 20 C5 U A 6 12.578 0.490 92.753 1.00 25.82 C
ATOM 21 C6 U A 6 11.415 0.556 92.094 1.00 25.19 C
ATOM 22 P G A 7 8.344 5.252 90.171 1.00 31.85 P
ATOM 23 OP1 G A 7 7.284 6.009 89.453 1.00 31.32 O
ATOM 24 OP2 G A 7 9.756 5.357 89.724 1.00 30.12 O
ATOM 25 O5' G A 7 8.339 5.667 91.715 1.00 30.46 O
TER
ATOM 1 O3' A B 4 15.475 -1.508 91.864 1.00 28.82 O
ATOM 2 P U B 5 16.431 -0.731 90.840 1.00 31.36 P
ATOM 3 OP1 U B 5 17.763 -1.388 90.803 1.00 30.97 O
ATOM 4 OP2 U B 5 16.322 0.687 91.252 1.00 33.01 O
ATOM 5 O5' U B 5 15.716 -0.896 89.428 1.00 31.65 O
ATOM 6 C5' U B 5 14.416 -0.353 89.193 1.00 31.25 C
ATOM 7 C4' U B 5 13.894 -0.804 87.844 1.00 31.18 C
ATOM 8 O4' U B 5 14.119 -2.226 87.699 1.00 30.08 O
ATOM 9 C3' U B 5 12.401 -0.572 87.632 1.00 29.44 C
ATOM 10 O3' U B 5 12.189 0.647 86.916 1.00 30.85 O
ATOM 11 C2' U B 5 11.978 -1.737 86.735 1.00 31.06 C
ATOM 12 O2' U B 5 12.109 -1.427 85.366 1.00 33.34 O
ATOM 13 C1' U B 5 13.002 -2.820 87.085 1.00 29.90 C
ATOM 14 N1 U B 5 12.589 -3.969 87.905 1.00 30.52 N
ATOM 15 C2 U B 5 11.860 -3.735 89.057 1.00 26.23 C
ATOM 16 O2 U B 5 11.530 -2.620 89.416 1.00 26.27 O
ATOM 17 N3 U B 5 11.544 -4.859 89.779 1.00 25.49 N
ATOM 18 C4 U B 5 11.873 -6.166 89.469 1.00 25.04 C
ATOM 19 O4 U B 5 11.546 -7.070 90.236 1.00 26.69 O
ATOM 20 C5 U B 5 12.612 -6.325 88.256 1.00 28.98 C
ATOM 21 C6 U B 5 12.936 -5.248 87.533 1.00 29.50 C
ATOM 22 P U B 6 12.027 2.039 87.706 1.00 30.25 P
ATOM 23 OP1 U B 6 11.408 3.006 86.767 1.00 31.38 O
ATOM 24 OP2 U B 6 13.326 2.364 88.344 1.00 33.53 O
ATOM 25 O5' U B 6 10.967 1.717 88.849 1.00 29.50 O
TER
ATOM 2 P U A 6 12.027 2.039 87.706 1.00 30.25 P
ATOM 3 OP1 U A 6 11.408 3.006 86.767 1.00 31.38 O
ATOM 4 OP2 U A 6 13.326 2.364 88.344 1.00 33.53 O
ATOM 5 O5' U A 6 10.967 1.717 88.849 1.00 29.50 O
ATOM 6 C5' U A 6 9.610 1.441 88.517 1.00 27.10 C
ATOM 7 C4' U A 6 8.753 1.450 89.757 1.00 25.48 C
ATOM 8 O4' U A 6 9.192 0.396 90.652 1.00 26.03 O
ATOM 9 C3' U A 6 8.817 2.705 90.617 1.00 26.31 C
ATOM 10 O3' U A 6 7.925 3.699 90.128 1.00 30.81 O
ATOM 11 C2' U A 6 8.315 2.180 91.953 1.00 23.35 C
ATOM 12 O2' U A 6 6.905 2.068 91.981 1.00 24.89 O
ATOM 13 C1' U A 6 8.942 0.784 91.989 1.00 24.37 C
ATOM 14 N1 U A 6 10.208 0.729 92.735 1.00 25.02 N
ATOM 15 C2 U A 6 10.143 0.852 94.105 1.00 23.98 C
ATOM 16 O2 U A 6 9.096 1.013 94.703 1.00 27.20 O
ATOM 17 N3 U A 6 11.352 0.779 94.755 1.00 25.46 N
ATOM 18 C4 U A 6 12.592 0.602 94.179 1.00 28.30 C
ATOM 19 O4 U A 6 13.590 0.554 94.898 1.00 27.65 O
ATOM 20 C5 U A 6 12.578 0.490 92.753 1.00 25.82 C
ATOM 21 C6 U A 6 11.415 0.556 92.094 1.00 25.19 C
ATOM 22 P G A 7 8.344 5.252 90.171 1.00 31.85 P
ATOM 23 OP1 G A 7 7.284 6.009 89.453 1.00 31.32 O
ATOM 24 OP2 G A 7 9.756 5.357 89.724 1.00 30.12 O
ATOM 25 O5' G A 7 8.339 5.667 91.715 1.00 30.46 O
TER
ATOM 1 O3' A B 4 15.475 -1.508 91.864 1.00 28.82 O
ATOM 2 P U B 5 16.431 -0.731 90.840 1.00 31.36 P
ATOM 3 OP1 U B 5 17.763 -1.388 90.803 1.00 30.97 O
ATOM 4 OP2 U B 5 16.322 0.687 91.252 1.00 33.01 O
ATOM 5 O5' U B 5 15.716 -0.896 89.428 1.00 31.65 O
ATOM 6 C5' U B 5 14.416 -0.353 89.193 1.00 31.25 C
ATOM 7 C4' U B 5 13.894 -0.804 87.844 1.00 31.18 C
ATOM 8 O4' U B 5 14.119 -2.226 87.699 1.00 30.08 O
ATOM 9 C3' U B 5 12.401 -0.572 87.632 1.00 29.44 C
ATOM 10 O3' U B 5 12.189 0.647 86.916 1.00 30.85 O
ATOM 11 C2' U B 5 11.978 -1.737 86.735 1.00 31.06 C
ATOM 12 O2' U B 5 12.109 -1.427 85.366 1.00 33.34 O
ATOM 13 C1' U B 5 13.002 -2.820 87.085 1.00 29.90 C
ATOM 14 N1 U B 5 12.589 -3.969 87.905 1.00 30.52 N
ATOM 15 C2 U B 5 11.860 -3.735 89.057 1.00 26.23 C
ATOM 16 O2 U B 5 11.530 -2.620 89.416 1.00 26.27 O
ATOM 17 N3 U B 5 11.544 -4.859 89.779 1.00 25.49 N
ATOM 18 C4 U B 5 11.873 -6.166 89.469 1.00 25.04 C
ATOM 19 O4 U B 5 11.546 -7.070 90.236 1.00 26.69 O
ATOM 20 C5 U B 5 12.612 -6.325 88.256 1.00 28.98 C
ATOM 21 C6 U B 5 12.936 -5.248 87.533 1.00 29.50 C
ATOM 22 P U B 6 12.027 2.039 87.706 1.00 30.25 P
ATOM 23 OP1 U B 6 11.408 3.006 86.767 1.00 31.38 O
ATOM 24 OP2 U B 6 13.326 2.364 88.344 1.00 33.53 O
ATOM 25 O5' U B 6 10.967 1.717 88.849 1.00 29.50 O
TER
Atoms:
C4: (12.592,0.602,94.179)
N3: (11.352,0.779,94.755)
OP1: (11.408,3.006,86.767)
OP2: (13.326,2.364,88.344)
C2: (10.143,0.852,94.105)
C1': (8.942,0.784,91.989)
C3': (8.817,2.705,90.617)
O5': (10.967,1.717,88.849)
O4': (9.192,0.396,90.652)
C5': (9.610,1.441,88.517)
P: (12.027,2.039,87.706)
C4': (8.753,1.450,89.757)
C2': (8.315,2.180,91.953)
O2': (6.905,2.068,91.981)
N1: (10.208,0.729,92.735)
O4: (13.590,0.554,94.898)
O2: (9.096,1.013,94.703)
C6: (11.415,0.556,92.094)
C5: (12.578,0.490,92.753)
O3': (7.925,3.699,90.128)
N3: (11.352,0.779,94.755)
OP1: (11.408,3.006,86.767)
OP2: (13.326,2.364,88.344)
C2: (10.143,0.852,94.105)
C1': (8.942,0.784,91.989)
C3': (8.817,2.705,90.617)
O5': (10.967,1.717,88.849)
O4': (9.192,0.396,90.652)
C5': (9.610,1.441,88.517)
P: (12.027,2.039,87.706)
C4': (8.753,1.450,89.757)
C2': (8.315,2.180,91.953)
O2': (6.905,2.068,91.981)
N1: (10.208,0.729,92.735)
O4: (13.590,0.554,94.898)
O2: (9.096,1.013,94.703)
C6: (11.415,0.556,92.094)
C5: (12.578,0.490,92.753)
O3': (7.925,3.699,90.128)
C4: (11.873,-6.166,89.469)
N3: (11.544,-4.859,89.779)
OP1: (17.763,-1.388,90.803)
OP2: (16.322,0.687,91.252)
C2: (11.860,-3.735,89.057)
C1': (13.002,-2.820,87.085)
C3': (12.401,-0.572,87.632)
O5': (15.716,-0.896,89.428)
O4': (14.119,-2.226,87.699)
C5': (14.416,-0.353,89.193)
P: (16.431,-0.731,90.840)
C4': (13.894,-0.804,87.844)
C2': (11.978,-1.737,86.735)
O2': (12.109,-1.427,85.366)
N1: (12.589,-3.969,87.905)
O4: (11.546,-7.070,90.236)
O2: (11.530,-2.620,89.416)
C6: (12.936,-5.248,87.533)
C5: (12.612,-6.325,88.256)
O3': (12.189,0.647,86.916)
N3: (11.544,-4.859,89.779)
OP1: (17.763,-1.388,90.803)
OP2: (16.322,0.687,91.252)
C2: (11.860,-3.735,89.057)
C1': (13.002,-2.820,87.085)
C3': (12.401,-0.572,87.632)
O5': (15.716,-0.896,89.428)
O4': (14.119,-2.226,87.699)
C5': (14.416,-0.353,89.193)
P: (16.431,-0.731,90.840)
C4': (13.894,-0.804,87.844)
C2': (11.978,-1.737,86.735)
O2': (12.109,-1.427,85.366)
N1: (12.589,-3.969,87.905)
O4: (11.546,-7.070,90.236)
O2: (11.530,-2.620,89.416)
C6: (12.936,-5.248,87.533)
C5: (12.612,-6.325,88.256)
O3': (12.189,0.647,86.916)
Image (generated by PyMOL):