Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SDS:E6:E5
Extra
PDB:
ATOM 1 O3' U A 5 10.368 -5.475 50.337 1.00 28.50 O
ATOM 2 P U A 6 10.942 -4.171 51.074 1.00 29.89 P
ATOM 3 OP1 U A 6 10.827 -3.052 50.099 1.00 31.90 O
ATOM 4 OP2 U A 6 12.263 -4.486 51.673 1.00 28.72 O
ATOM 5 O5' U A 6 9.914 -3.906 52.259 1.00 27.35 O
ATOM 6 C5' U A 6 8.569 -3.549 51.978 1.00 25.48 C
ATOM 7 C4' U A 6 7.871 -3.132 53.246 1.00 26.83 C
ATOM 8 O4' U A 6 7.778 -4.279 54.131 1.00 26.97 O
ATOM 9 C3' U A 6 8.581 -2.080 54.086 1.00 27.02 C
ATOM 10 O3' U A 6 8.288 -0.764 53.618 1.00 28.78 O
ATOM 11 C2' U A 6 7.953 -2.312 55.454 1.00 26.25 C
ATOM 12 O2' U A 6 6.662 -1.736 55.533 1.00 25.15 O
ATOM 13 C1' U A 6 7.818 -3.838 55.473 1.00 24.94 C
ATOM 14 N1 U A 6 8.918 -4.529 56.160 1.00 24.23 N
ATOM 15 C2 U A 6 8.951 -4.442 57.534 1.00 27.79 C
ATOM 16 O2 U A 6 8.114 -3.820 58.173 1.00 25.68 O
ATOM 17 N3 U A 6 9.990 -5.111 58.136 1.00 23.83 N
ATOM 18 C4 U A 6 10.978 -5.849 57.508 1.00 27.14 C
ATOM 19 O4 U A 6 11.850 -6.398 58.190 1.00 26.24 O
ATOM 20 C5 U A 6 10.875 -5.889 56.079 1.00 26.98 C
ATOM 21 C6 U A 6 9.875 -5.242 55.467 1.00 26.56 C
ATOM 22 P G A 7 9.441 0.366 53.603 1.00 31.25 P
ATOM 23 OP1 G A 7 8.837 1.573 52.977 1.00 34.70 O
ATOM 24 OP2 G A 7 10.675 -0.210 53.023 1.00 34.02 O
ATOM 25 O5' G A 7 9.748 0.675 55.140 1.00 32.18 O
TER
ATOM 1 O3' A B 4 12.280 -9.130 55.274 1.00 25.02 O
ATOM 2 P U B 5 13.426 -8.860 54.186 1.00 27.02 P
ATOM 3 OP1 U B 5 14.289 -10.067 54.067 1.00 28.90 O
ATOM 4 OP2 U B 5 14.017 -7.569 54.603 1.00 26.83 O
ATOM 5 O5' U B 5 12.640 -8.657 52.814 1.00 29.07 O
ATOM 6 C5' U B 5 11.869 -7.483 52.572 1.00 27.29 C
ATOM 7 C4' U B 5 11.186 -7.571 51.223 1.00 27.69 C
ATOM 8 O4' U B 5 10.710 -8.918 51.015 1.00 26.18 O
ATOM 9 C3' U B 5 9.991 -6.632 51.087 1.00 27.95 C
ATOM 10 O3' U B 5 10.368 -5.475 50.337 1.00 28.50 O
ATOM 11 C2' U B 5 8.985 -7.422 50.249 1.00 28.00 C
ATOM 12 O2' U B 5 9.070 -7.118 48.871 1.00 28.62 O
ATOM 13 C1' U B 5 9.408 -8.878 50.480 1.00 26.12 C
ATOM 14 N1 U B 5 8.554 -9.745 51.301 1.00 23.13 N
ATOM 15 C2 U B 5 8.111 -9.268 52.521 1.00 22.61 C
ATOM 16 O2 U B 5 8.402 -8.168 52.941 1.00 24.35 O
ATOM 17 N3 U B 5 7.326 -10.142 53.233 1.00 20.76 N
ATOM 18 C4 U B 5 6.952 -11.418 52.856 1.00 22.99 C
ATOM 19 O4 U B 5 6.249 -12.093 53.610 1.00 24.73 O
ATOM 20 C5 U B 5 7.445 -11.830 51.576 1.00 24.20 C
ATOM 21 C6 U B 5 8.208 -11.002 50.862 1.00 24.68 C
ATOM 22 P U B 6 10.942 -4.171 51.074 1.00 29.89 P
ATOM 23 OP1 U B 6 10.827 -3.052 50.099 1.00 31.90 O
ATOM 24 OP2 U B 6 12.263 -4.486 51.673 1.00 28.72 O
ATOM 25 O5' U B 6 9.914 -3.906 52.259 1.00 27.35 O
TER
ATOM 2 P U A 6 10.942 -4.171 51.074 1.00 29.89 P
ATOM 3 OP1 U A 6 10.827 -3.052 50.099 1.00 31.90 O
ATOM 4 OP2 U A 6 12.263 -4.486 51.673 1.00 28.72 O
ATOM 5 O5' U A 6 9.914 -3.906 52.259 1.00 27.35 O
ATOM 6 C5' U A 6 8.569 -3.549 51.978 1.00 25.48 C
ATOM 7 C4' U A 6 7.871 -3.132 53.246 1.00 26.83 C
ATOM 8 O4' U A 6 7.778 -4.279 54.131 1.00 26.97 O
ATOM 9 C3' U A 6 8.581 -2.080 54.086 1.00 27.02 C
ATOM 10 O3' U A 6 8.288 -0.764 53.618 1.00 28.78 O
ATOM 11 C2' U A 6 7.953 -2.312 55.454 1.00 26.25 C
ATOM 12 O2' U A 6 6.662 -1.736 55.533 1.00 25.15 O
ATOM 13 C1' U A 6 7.818 -3.838 55.473 1.00 24.94 C
ATOM 14 N1 U A 6 8.918 -4.529 56.160 1.00 24.23 N
ATOM 15 C2 U A 6 8.951 -4.442 57.534 1.00 27.79 C
ATOM 16 O2 U A 6 8.114 -3.820 58.173 1.00 25.68 O
ATOM 17 N3 U A 6 9.990 -5.111 58.136 1.00 23.83 N
ATOM 18 C4 U A 6 10.978 -5.849 57.508 1.00 27.14 C
ATOM 19 O4 U A 6 11.850 -6.398 58.190 1.00 26.24 O
ATOM 20 C5 U A 6 10.875 -5.889 56.079 1.00 26.98 C
ATOM 21 C6 U A 6 9.875 -5.242 55.467 1.00 26.56 C
ATOM 22 P G A 7 9.441 0.366 53.603 1.00 31.25 P
ATOM 23 OP1 G A 7 8.837 1.573 52.977 1.00 34.70 O
ATOM 24 OP2 G A 7 10.675 -0.210 53.023 1.00 34.02 O
ATOM 25 O5' G A 7 9.748 0.675 55.140 1.00 32.18 O
TER
ATOM 1 O3' A B 4 12.280 -9.130 55.274 1.00 25.02 O
ATOM 2 P U B 5 13.426 -8.860 54.186 1.00 27.02 P
ATOM 3 OP1 U B 5 14.289 -10.067 54.067 1.00 28.90 O
ATOM 4 OP2 U B 5 14.017 -7.569 54.603 1.00 26.83 O
ATOM 5 O5' U B 5 12.640 -8.657 52.814 1.00 29.07 O
ATOM 6 C5' U B 5 11.869 -7.483 52.572 1.00 27.29 C
ATOM 7 C4' U B 5 11.186 -7.571 51.223 1.00 27.69 C
ATOM 8 O4' U B 5 10.710 -8.918 51.015 1.00 26.18 O
ATOM 9 C3' U B 5 9.991 -6.632 51.087 1.00 27.95 C
ATOM 10 O3' U B 5 10.368 -5.475 50.337 1.00 28.50 O
ATOM 11 C2' U B 5 8.985 -7.422 50.249 1.00 28.00 C
ATOM 12 O2' U B 5 9.070 -7.118 48.871 1.00 28.62 O
ATOM 13 C1' U B 5 9.408 -8.878 50.480 1.00 26.12 C
ATOM 14 N1 U B 5 8.554 -9.745 51.301 1.00 23.13 N
ATOM 15 C2 U B 5 8.111 -9.268 52.521 1.00 22.61 C
ATOM 16 O2 U B 5 8.402 -8.168 52.941 1.00 24.35 O
ATOM 17 N3 U B 5 7.326 -10.142 53.233 1.00 20.76 N
ATOM 18 C4 U B 5 6.952 -11.418 52.856 1.00 22.99 C
ATOM 19 O4 U B 5 6.249 -12.093 53.610 1.00 24.73 O
ATOM 20 C5 U B 5 7.445 -11.830 51.576 1.00 24.20 C
ATOM 21 C6 U B 5 8.208 -11.002 50.862 1.00 24.68 C
ATOM 22 P U B 6 10.942 -4.171 51.074 1.00 29.89 P
ATOM 23 OP1 U B 6 10.827 -3.052 50.099 1.00 31.90 O
ATOM 24 OP2 U B 6 12.263 -4.486 51.673 1.00 28.72 O
ATOM 25 O5' U B 6 9.914 -3.906 52.259 1.00 27.35 O
TER
Atoms:
C4: (10.978,-5.849,57.508)
N3: (9.990,-5.111,58.136)
OP1: (10.827,-3.052,50.099)
OP2: (12.263,-4.486,51.673)
C2: (8.951,-4.442,57.534)
C1': (7.818,-3.838,55.473)
C3': (8.581,-2.080,54.086)
O5': (9.914,-3.906,52.259)
O4': (7.778,-4.279,54.131)
C5': (8.569,-3.549,51.978)
P: (10.942,-4.171,51.074)
C4': (7.871,-3.132,53.246)
C2': (7.953,-2.312,55.454)
O2': (6.662,-1.736,55.533)
N1: (8.918,-4.529,56.160)
O4: (11.850,-6.398,58.190)
O2: (8.114,-3.820,58.173)
C6: (9.875,-5.242,55.467)
C5: (10.875,-5.889,56.079)
O3': (8.288,-0.764,53.618)
N3: (9.990,-5.111,58.136)
OP1: (10.827,-3.052,50.099)
OP2: (12.263,-4.486,51.673)
C2: (8.951,-4.442,57.534)
C1': (7.818,-3.838,55.473)
C3': (8.581,-2.080,54.086)
O5': (9.914,-3.906,52.259)
O4': (7.778,-4.279,54.131)
C5': (8.569,-3.549,51.978)
P: (10.942,-4.171,51.074)
C4': (7.871,-3.132,53.246)
C2': (7.953,-2.312,55.454)
O2': (6.662,-1.736,55.533)
N1: (8.918,-4.529,56.160)
O4: (11.850,-6.398,58.190)
O2: (8.114,-3.820,58.173)
C6: (9.875,-5.242,55.467)
C5: (10.875,-5.889,56.079)
O3': (8.288,-0.764,53.618)
C4: (6.952,-11.418,52.856)
N3: (7.326,-10.142,53.233)
OP1: (14.289,-10.067,54.067)
OP2: (14.017,-7.569,54.603)
C2: (8.111,-9.268,52.521)
C1': (9.408,-8.878,50.480)
C3': (9.991,-6.632,51.087)
O5': (12.640,-8.657,52.814)
O4': (10.710,-8.918,51.015)
C5': (11.869,-7.483,52.572)
P: (13.426,-8.860,54.186)
C4': (11.186,-7.571,51.223)
C2': (8.985,-7.422,50.249)
O2': (9.070,-7.118,48.871)
N1: (8.554,-9.745,51.301)
O4: (6.249,-12.093,53.610)
O2: (8.402,-8.168,52.941)
C6: (8.208,-11.002,50.862)
C5: (7.445,-11.830,51.576)
O3': (10.368,-5.475,50.337)
N3: (7.326,-10.142,53.233)
OP1: (14.289,-10.067,54.067)
OP2: (14.017,-7.569,54.603)
C2: (8.111,-9.268,52.521)
C1': (9.408,-8.878,50.480)
C3': (9.991,-6.632,51.087)
O5': (12.640,-8.657,52.814)
O4': (10.710,-8.918,51.015)
C5': (11.869,-7.483,52.572)
P: (13.426,-8.860,54.186)
C4': (11.186,-7.571,51.223)
C2': (8.985,-7.422,50.249)
O2': (9.070,-7.118,48.871)
N1: (8.554,-9.745,51.301)
O4: (6.249,-12.093,53.610)
O2: (8.402,-8.168,52.941)
C6: (8.208,-11.002,50.862)
C5: (7.445,-11.830,51.576)
O3': (10.368,-5.475,50.337)
Image (generated by PyMOL):