Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X35:X34
Extra
PDB:
ATOM 1 O3' U A 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 2 P U A 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U A 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U A 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U A 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U A 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U A 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U A 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U A 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U A 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U A 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U A 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U A 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U A 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U A 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U A 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U A 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U A 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U A 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U A 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U A 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
ATOM 1 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 2 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 3 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 4 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 5 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
ATOM 6 C5' U B 34 -1.087 -4.470 8.666 1.00 49.43 C
ATOM 7 C4' U B 34 -2.535 -4.701 8.286 1.00 48.93 C
ATOM 8 O4' U B 34 -2.786 -4.082 7.001 1.00 48.69 O
ATOM 9 C3' U B 34 -2.927 -6.171 8.123 1.00 48.66 C
ATOM 10 O3' U B 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 11 C2' U B 34 -2.790 -6.391 6.621 1.00 47.95 C
ATOM 12 O2' U B 34 -3.586 -7.459 6.132 1.00 46.74 O
ATOM 13 C1' U B 34 -3.291 -5.048 6.101 1.00 47.62 C
ATOM 14 N1 U B 34 -2.834 -4.681 4.735 1.00 47.38 N
ATOM 15 C2 U B 34 -3.776 -4.441 3.748 1.00 46.99 C
ATOM 16 O2 U B 34 -4.981 -4.520 3.927 1.00 46.71 O
ATOM 17 N3 U B 34 -3.243 -4.102 2.528 1.00 46.50 N
ATOM 18 C4 U B 34 -1.899 -3.983 2.208 1.00 47.19 C
ATOM 19 O4 U B 34 -1.562 -3.667 1.073 1.00 47.61 O
ATOM 20 C5 U B 34 -0.980 -4.251 3.284 1.00 47.18 C
ATOM 21 C6 U B 34 -1.479 -4.578 4.482 1.00 47.46 C
ATOM 22 P U B 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 23 OP1 U B 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 24 OP2 U B 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 25 O5' U B 35 -3.947 -7.997 10.373 1.00 48.90 O
TER
ATOM 2 P U A 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 3 OP1 U A 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 4 OP2 U A 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 5 O5' U A 35 -3.947 -7.997 10.373 1.00 48.90 O
ATOM 6 C5' U A 35 -4.221 -9.231 9.724 1.00 47.48 C
ATOM 7 C4' U A 35 -3.112 -10.179 10.132 1.00 47.41 C
ATOM 8 O4' U A 35 -1.857 -9.719 9.574 1.00 47.11 O
ATOM 9 C3' U A 35 -2.882 -10.220 11.639 1.00 47.28 C
ATOM 10 O3' U A 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 11 C2' U A 35 -1.489 -9.630 11.851 1.00 47.26 C
ATOM 12 O2' U A 35 -0.784 -10.194 12.938 1.00 47.06 O
ATOM 13 C1' U A 35 -0.863 -10.026 10.522 1.00 48.30 C
ATOM 14 N1 U A 35 0.414 -9.345 10.156 1.00 48.29 N
ATOM 15 C2 U A 35 1.448 -10.127 9.687 1.00 48.50 C
ATOM 16 O2 U A 35 1.355 -11.336 9.560 1.00 49.15 O
ATOM 17 N3 U A 35 2.594 -9.435 9.365 1.00 48.75 N
ATOM 18 C4 U A 35 2.788 -8.064 9.468 1.00 48.76 C
ATOM 19 O4 U A 35 3.859 -7.572 9.145 1.00 49.37 O
ATOM 20 C5 U A 35 1.664 -7.316 9.967 1.00 49.16 C
ATOM 21 C6 U A 35 0.539 -7.973 10.280 1.00 48.72 C
ATOM 22 P C A 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 23 OP1 C A 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 24 OP2 C A 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 25 O5' C A 36 -4.040 -13.311 13.469 1.00 46.83 O
TER
ATOM 1 O3' U B 33 0.532 -4.216 11.433 1.00 50.21 O
ATOM 2 P U B 34 0.497 -3.145 10.248 1.00 50.17 P
ATOM 3 OP1 U B 34 1.540 -3.501 9.265 1.00 50.91 O
ATOM 4 OP2 U B 34 0.507 -1.799 10.859 1.00 51.41 O
ATOM 5 O5' U B 34 -0.939 -3.401 9.584 1.00 49.73 O
ATOM 6 C5' U B 34 -1.087 -4.470 8.666 1.00 49.43 C
ATOM 7 C4' U B 34 -2.535 -4.701 8.286 1.00 48.93 C
ATOM 8 O4' U B 34 -2.786 -4.082 7.001 1.00 48.69 O
ATOM 9 C3' U B 34 -2.927 -6.171 8.123 1.00 48.66 C
ATOM 10 O3' U B 34 -4.281 -6.379 8.510 1.00 49.03 O
ATOM 11 C2' U B 34 -2.790 -6.391 6.621 1.00 47.95 C
ATOM 12 O2' U B 34 -3.586 -7.459 6.132 1.00 46.74 O
ATOM 13 C1' U B 34 -3.291 -5.048 6.101 1.00 47.62 C
ATOM 14 N1 U B 34 -2.834 -4.681 4.735 1.00 47.38 N
ATOM 15 C2 U B 34 -3.776 -4.441 3.748 1.00 46.99 C
ATOM 16 O2 U B 34 -4.981 -4.520 3.927 1.00 46.71 O
ATOM 17 N3 U B 34 -3.243 -4.102 2.528 1.00 46.50 N
ATOM 18 C4 U B 34 -1.899 -3.983 2.208 1.00 47.19 C
ATOM 19 O4 U B 34 -1.562 -3.667 1.073 1.00 47.61 O
ATOM 20 C5 U B 34 -0.980 -4.251 3.284 1.00 47.18 C
ATOM 21 C6 U B 34 -1.479 -4.578 4.482 1.00 47.46 C
ATOM 22 P U B 35 -4.715 -6.649 10.022 1.00 50.03 P
ATOM 23 OP1 U B 35 -6.172 -6.935 10.014 1.00 49.92 O
ATOM 24 OP2 U B 35 -4.181 -5.574 10.888 1.00 49.55 O
ATOM 25 O5' U B 35 -3.947 -7.997 10.373 1.00 48.90 O
TER
Atoms:
C4: (2.788,-8.064,9.468)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
N3: (2.594,-9.435,9.365)
OP1: (-6.172,-6.935,10.014)
OP2: (-4.181,-5.574,10.888)
C2: (1.448,-10.127,9.687)
C1': (-0.863,-10.026,10.522)
C3': (-2.882,-10.220,11.639)
O5': (-3.947,-7.997,10.373)
O4': (-1.857,-9.719,9.574)
C5': (-4.221,-9.231,9.724)
P: (-4.715,-6.649,10.022)
C4': (-3.112,-10.179,10.132)
C2': (-1.489,-9.630,11.851)
O2': (-0.784,-10.194,12.938)
N1: (0.414,-9.345,10.156)
O4: (3.859,-7.572,9.145)
O2: (1.355,-11.336,9.560)
C6: (0.539,-7.973,10.280)
C5: (1.664,-7.316,9.967)
O3': (-2.994,-11.547,12.094)
C4: (-1.899,-3.983,2.208)
N3: (-3.243,-4.102,2.528)
OP1: (1.540,-3.501,9.265)
OP2: (0.507,-1.799,10.859)
C2: (-3.776,-4.441,3.748)
C1': (-3.291,-5.048,6.101)
C3': (-2.927,-6.171,8.123)
O5': (-0.939,-3.401,9.584)
O4': (-2.786,-4.082,7.001)
C5': (-1.087,-4.470,8.666)
P: (0.497,-3.145,10.248)
C4': (-2.535,-4.701,8.286)
C2': (-2.790,-6.391,6.621)
O2': (-3.586,-7.459,6.132)
N1: (-2.834,-4.681,4.735)
O4: (-1.562,-3.667,1.073)
O2: (-4.981,-4.520,3.927)
C6: (-1.479,-4.578,4.482)
C5: (-0.980,-4.251,3.284)
O3': (-4.281,-6.379,8.510)
N3: (-3.243,-4.102,2.528)
OP1: (1.540,-3.501,9.265)
OP2: (0.507,-1.799,10.859)
C2: (-3.776,-4.441,3.748)
C1': (-3.291,-5.048,6.101)
C3': (-2.927,-6.171,8.123)
O5': (-0.939,-3.401,9.584)
O4': (-2.786,-4.082,7.001)
C5': (-1.087,-4.470,8.666)
P: (0.497,-3.145,10.248)
C4': (-2.535,-4.701,8.286)
C2': (-2.790,-6.391,6.621)
O2': (-3.586,-7.459,6.132)
N1: (-2.834,-4.681,4.735)
O4: (-1.562,-3.667,1.073)
O2: (-4.981,-4.520,3.927)
C6: (-1.479,-4.578,4.482)
C5: (-0.980,-4.251,3.284)
O3': (-4.281,-6.379,8.510)
Image (generated by PyMOL):