Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0706:0705
Extra
PDB:
ATOM 1 O3' C A 705 19.172 52.651 55.274 1.00 73.24 O
ATOM 2 P C A 706 20.670 53.185 55.190 1.00 74.56 P
ATOM 3 OP1 C A 706 21.469 52.202 54.413 1.00 74.88 O
ATOM 4 OP2 C A 706 21.091 53.550 56.572 1.00 73.40 O
ATOM 5 O5' C A 706 20.493 54.517 54.337 1.00 72.87 O
ATOM 6 C5' C A 706 19.667 54.511 53.154 1.00 69.82 C
ATOM 7 C4' C A 706 19.482 55.911 52.625 1.00 67.32 C
ATOM 8 O4' C A 706 18.438 56.619 53.342 1.00 66.42 O
ATOM 9 C3' C A 706 20.679 56.825 52.755 1.00 65.13 C
ATOM 10 O3' C A 706 21.671 56.549 51.796 1.00 64.54 O
ATOM 11 C2' C A 706 20.042 58.189 52.578 1.00 64.31 C
ATOM 12 O2' C A 706 19.715 58.432 51.227 1.00 63.24 O
ATOM 13 C1' C A 706 18.754 58.005 53.378 1.00 64.89 C
ATOM 14 N1 C A 706 18.905 58.411 54.786 1.00 65.38 N
ATOM 15 C2 C A 706 18.610 59.730 55.144 1.00 64.97 C
ATOM 16 O2 C A 706 18.273 60.530 54.260 1.00 64.86 O
ATOM 17 N3 C A 706 18.706 60.101 56.443 1.00 64.95 N
ATOM 18 C4 C A 706 19.095 59.215 57.363 1.00 65.81 C
ATOM 19 N4 C A 706 19.165 59.616 58.634 1.00 65.50 N
ATOM 20 C5 C A 706 19.427 57.873 57.022 1.00 66.64 C
ATOM 21 C6 C A 706 19.318 57.516 55.736 1.00 66.36 C
ATOM 22 P G A 707 23.194 56.874 52.149 1.00 64.74 P
ATOM 23 OP1 G A 707 24.029 56.414 51.006 1.00 64.44 O
ATOM 24 OP2 G A 707 23.465 56.363 53.522 1.00 63.91 O
ATOM 25 O5' G A 707 23.194 58.465 52.181 1.00 64.98 O
TER
ATOM 1 O3' C B 704 17.200 50.439 61.498 1.00 89.48 O
ATOM 2 P C B 705 18.384 51.086 60.627 1.00 87.85 P
ATOM 3 OP1 C B 705 19.570 50.180 60.635 1.00 86.92 O
ATOM 4 OP2 C B 705 18.541 52.505 61.044 1.00 87.42 O
ATOM 5 O5' C B 705 17.800 51.087 59.152 1.00 84.41 O
ATOM 6 C5' C B 705 18.535 51.721 58.117 1.00 81.08 C
ATOM 7 C4' C B 705 17.624 52.191 57.021 1.00 76.89 C
ATOM 8 O4' C B 705 16.454 52.857 57.554 1.00 75.99 O
ATOM 9 C3' C B 705 18.295 53.251 56.189 1.00 74.78 C
ATOM 10 O3' C B 705 19.172 52.651 55.274 1.00 73.24 O
ATOM 11 C2' C B 705 17.129 53.995 55.574 1.00 74.09 C
ATOM 12 O2' C B 705 16.596 53.309 54.465 1.00 74.85 O
ATOM 13 C1' C B 705 16.131 53.973 56.736 1.00 74.11 C
ATOM 14 N1 C B 705 16.137 55.184 57.581 1.00 73.36 N
ATOM 15 C2 C B 705 15.791 56.414 57.009 1.00 72.82 C
ATOM 16 O2 C B 705 15.529 56.465 55.797 1.00 73.03 O
ATOM 17 N3 C B 705 15.748 57.515 57.792 1.00 72.32 N
ATOM 18 C4 C B 705 16.040 57.424 59.091 1.00 72.21 C
ATOM 19 N4 C B 705 15.968 58.533 59.826 1.00 72.23 N
ATOM 20 C5 C B 705 16.415 56.192 59.693 1.00 72.24 C
ATOM 21 C6 C B 705 16.454 55.109 58.910 1.00 72.97 C
ATOM 22 P C B 706 20.670 53.185 55.190 1.00 74.56 P
ATOM 23 OP1 C B 706 21.469 52.202 54.413 1.00 74.88 O
ATOM 24 OP2 C B 706 21.091 53.550 56.572 1.00 73.40 O
ATOM 25 O5' C B 706 20.493 54.517 54.337 1.00 72.87 O
TER
ATOM 2 P C A 706 20.670 53.185 55.190 1.00 74.56 P
ATOM 3 OP1 C A 706 21.469 52.202 54.413 1.00 74.88 O
ATOM 4 OP2 C A 706 21.091 53.550 56.572 1.00 73.40 O
ATOM 5 O5' C A 706 20.493 54.517 54.337 1.00 72.87 O
ATOM 6 C5' C A 706 19.667 54.511 53.154 1.00 69.82 C
ATOM 7 C4' C A 706 19.482 55.911 52.625 1.00 67.32 C
ATOM 8 O4' C A 706 18.438 56.619 53.342 1.00 66.42 O
ATOM 9 C3' C A 706 20.679 56.825 52.755 1.00 65.13 C
ATOM 10 O3' C A 706 21.671 56.549 51.796 1.00 64.54 O
ATOM 11 C2' C A 706 20.042 58.189 52.578 1.00 64.31 C
ATOM 12 O2' C A 706 19.715 58.432 51.227 1.00 63.24 O
ATOM 13 C1' C A 706 18.754 58.005 53.378 1.00 64.89 C
ATOM 14 N1 C A 706 18.905 58.411 54.786 1.00 65.38 N
ATOM 15 C2 C A 706 18.610 59.730 55.144 1.00 64.97 C
ATOM 16 O2 C A 706 18.273 60.530 54.260 1.00 64.86 O
ATOM 17 N3 C A 706 18.706 60.101 56.443 1.00 64.95 N
ATOM 18 C4 C A 706 19.095 59.215 57.363 1.00 65.81 C
ATOM 19 N4 C A 706 19.165 59.616 58.634 1.00 65.50 N
ATOM 20 C5 C A 706 19.427 57.873 57.022 1.00 66.64 C
ATOM 21 C6 C A 706 19.318 57.516 55.736 1.00 66.36 C
ATOM 22 P G A 707 23.194 56.874 52.149 1.00 64.74 P
ATOM 23 OP1 G A 707 24.029 56.414 51.006 1.00 64.44 O
ATOM 24 OP2 G A 707 23.465 56.363 53.522 1.00 63.91 O
ATOM 25 O5' G A 707 23.194 58.465 52.181 1.00 64.98 O
TER
ATOM 1 O3' C B 704 17.200 50.439 61.498 1.00 89.48 O
ATOM 2 P C B 705 18.384 51.086 60.627 1.00 87.85 P
ATOM 3 OP1 C B 705 19.570 50.180 60.635 1.00 86.92 O
ATOM 4 OP2 C B 705 18.541 52.505 61.044 1.00 87.42 O
ATOM 5 O5' C B 705 17.800 51.087 59.152 1.00 84.41 O
ATOM 6 C5' C B 705 18.535 51.721 58.117 1.00 81.08 C
ATOM 7 C4' C B 705 17.624 52.191 57.021 1.00 76.89 C
ATOM 8 O4' C B 705 16.454 52.857 57.554 1.00 75.99 O
ATOM 9 C3' C B 705 18.295 53.251 56.189 1.00 74.78 C
ATOM 10 O3' C B 705 19.172 52.651 55.274 1.00 73.24 O
ATOM 11 C2' C B 705 17.129 53.995 55.574 1.00 74.09 C
ATOM 12 O2' C B 705 16.596 53.309 54.465 1.00 74.85 O
ATOM 13 C1' C B 705 16.131 53.973 56.736 1.00 74.11 C
ATOM 14 N1 C B 705 16.137 55.184 57.581 1.00 73.36 N
ATOM 15 C2 C B 705 15.791 56.414 57.009 1.00 72.82 C
ATOM 16 O2 C B 705 15.529 56.465 55.797 1.00 73.03 O
ATOM 17 N3 C B 705 15.748 57.515 57.792 1.00 72.32 N
ATOM 18 C4 C B 705 16.040 57.424 59.091 1.00 72.21 C
ATOM 19 N4 C B 705 15.968 58.533 59.826 1.00 72.23 N
ATOM 20 C5 C B 705 16.415 56.192 59.693 1.00 72.24 C
ATOM 21 C6 C B 705 16.454 55.109 58.910 1.00 72.97 C
ATOM 22 P C B 706 20.670 53.185 55.190 1.00 74.56 P
ATOM 23 OP1 C B 706 21.469 52.202 54.413 1.00 74.88 O
ATOM 24 OP2 C B 706 21.091 53.550 56.572 1.00 73.40 O
ATOM 25 O5' C B 706 20.493 54.517 54.337 1.00 72.87 O
TER
Atoms:
C2: (18.610,59.730,55.144)
OP1: (21.469,52.202,54.413)
OP2: (21.091,53.550,56.572)
C4: (19.095,59.215,57.363)
O5': (20.493,54.517,54.337)
C3': (20.679,56.825,52.755)
C1': (18.754,58.005,53.378)
O4': (18.438,56.619,53.342)
C5': (19.667,54.511,53.154)
P: (20.670,53.185,55.190)
O2: (18.273,60.530,54.260)
C4': (19.482,55.911,52.625)
C2': (20.042,58.189,52.578)
O2': (19.715,58.432,51.227)
N1: (18.905,58.411,54.786)
N3: (18.706,60.101,56.443)
N4: (19.165,59.616,58.634)
C6: (19.318,57.516,55.736)
C5: (19.427,57.873,57.022)
O3': (21.671,56.549,51.796)
OP1: (21.469,52.202,54.413)
OP2: (21.091,53.550,56.572)
C4: (19.095,59.215,57.363)
O5': (20.493,54.517,54.337)
C3': (20.679,56.825,52.755)
C1': (18.754,58.005,53.378)
O4': (18.438,56.619,53.342)
C5': (19.667,54.511,53.154)
P: (20.670,53.185,55.190)
O2: (18.273,60.530,54.260)
C4': (19.482,55.911,52.625)
C2': (20.042,58.189,52.578)
O2': (19.715,58.432,51.227)
N1: (18.905,58.411,54.786)
N3: (18.706,60.101,56.443)
N4: (19.165,59.616,58.634)
C6: (19.318,57.516,55.736)
C5: (19.427,57.873,57.022)
O3': (21.671,56.549,51.796)
C2: (15.791,56.414,57.009)
OP1: (19.570,50.180,60.635)
OP2: (18.541,52.505,61.044)
C4: (16.040,57.424,59.091)
O5': (17.800,51.087,59.152)
C3': (18.295,53.251,56.189)
C1': (16.131,53.973,56.736)
O4': (16.454,52.857,57.554)
C5': (18.535,51.721,58.117)
P: (18.384,51.086,60.627)
O2: (15.529,56.465,55.797)
C4': (17.624,52.191,57.021)
C2': (17.129,53.995,55.574)
O2': (16.596,53.309,54.465)
N1: (16.137,55.184,57.581)
N3: (15.748,57.515,57.792)
N4: (15.968,58.533,59.826)
C6: (16.454,55.109,58.910)
C5: (16.415,56.192,59.693)
O3': (19.172,52.651,55.274)
OP1: (19.570,50.180,60.635)
OP2: (18.541,52.505,61.044)
C4: (16.040,57.424,59.091)
O5': (17.800,51.087,59.152)
C3': (18.295,53.251,56.189)
C1': (16.131,53.973,56.736)
O4': (16.454,52.857,57.554)
C5': (18.535,51.721,58.117)
P: (18.384,51.086,60.627)
O2: (15.529,56.465,55.797)
C4': (17.624,52.191,57.021)
C2': (17.129,53.995,55.574)
O2': (16.596,53.309,54.465)
N1: (16.137,55.184,57.581)
N3: (15.748,57.515,57.792)
N4: (15.968,58.533,59.826)
C6: (16.454,55.109,58.910)
C5: (16.415,56.192,59.693)
O3': (19.172,52.651,55.274)
Image (generated by PyMOL):