Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZBH:E8:E7
Extra
PDB:
ATOM 1 O3' U A 7 -0.024 -14.621 24.307 1.00 50.42 O
ATOM 2 P U A 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 3 OP1 U A 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 4 OP2 U A 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 5 O5' U A 8 -0.806 -15.816 22.255 1.00 50.37 O
ATOM 6 C5' U A 8 0.270 -16.713 21.981 1.00 50.31 C
ATOM 7 C4' U A 8 -0.243 -18.050 21.467 1.00 50.26 C
ATOM 8 O4' U A 8 -1.259 -18.564 22.367 1.00 50.30 O
ATOM 9 C3' U A 8 -0.868 -18.023 20.071 1.00 50.21 C
ATOM 10 O3' U A 8 -0.246 -19.019 19.254 1.00 50.17 O
ATOM 11 C2' U A 8 -2.356 -18.299 20.315 1.00 50.18 C
ATOM 12 O2' U A 8 -2.964 -19.056 19.284 1.00 49.97 O
ATOM 13 C1' U A 8 -2.330 -19.097 21.618 1.00 50.20 C
ATOM 14 N1 U A 8 -3.592 -19.026 22.440 1.00 50.18 N
ATOM 15 C2 U A 8 -4.463 -20.106 22.448 1.00 50.16 C
ATOM 16 O2 U A 8 -4.280 -21.134 21.819 1.00 50.18 O
ATOM 17 N3 U A 8 -5.583 -19.943 23.232 1.00 50.13 N
ATOM 18 C4 U A 8 -5.915 -18.835 23.994 1.00 50.12 C
ATOM 19 O4 U A 8 -6.953 -18.837 24.645 1.00 50.09 O
ATOM 20 C5 U A 8 -4.964 -17.751 23.941 1.00 50.15 C
ATOM 21 C6 U A 8 -3.864 -17.886 23.184 1.00 50.19 C
ATOM 22 P C A 9 1.005 -18.682 18.304 1.00 50.13 P
ATOM 23 OP1 C A 9 1.648 -17.423 18.754 1.00 50.23 O
ATOM 24 OP2 C A 9 0.536 -18.789 16.902 1.00 50.03 O
ATOM 25 O5' C A 9 1.991 -19.918 18.581 1.00 49.92 O
TER
ATOM 1 O3' U B 6 -5.559 -14.590 25.719 1.00 50.17 O
ATOM 2 P U B 7 -4.916 -13.855 26.994 1.00 50.37 P
ATOM 3 OP1 U B 7 -5.220 -14.689 28.177 1.00 50.24 O
ATOM 4 OP2 U B 7 -5.316 -12.427 26.985 1.00 50.34 O
ATOM 5 O5' U B 7 -3.341 -13.987 26.729 1.00 50.47 O
ATOM 6 C5' U B 7 -2.545 -12.875 26.312 1.00 50.52 C
ATOM 7 C4' U B 7 -1.111 -13.289 26.003 1.00 50.49 C
ATOM 8 O4' U B 7 -0.307 -13.249 27.209 1.00 50.46 O
ATOM 9 C3' U B 7 -0.917 -14.689 25.416 1.00 50.46 C
ATOM 10 O3' U B 7 -0.024 -14.621 24.307 1.00 50.42 O
ATOM 11 C2' U B 7 -0.317 -15.477 26.579 1.00 50.46 C
ATOM 12 O2' U B 7 0.494 -16.550 26.149 1.00 50.46 O
ATOM 13 C1' U B 7 0.524 -14.391 27.242 1.00 50.44 C
ATOM 14 N1 U B 7 0.944 -14.645 28.665 1.00 50.45 N
ATOM 15 C2 U B 7 2.294 -14.764 28.974 1.00 50.42 C
ATOM 16 O2 U B 7 3.195 -14.685 28.155 1.00 50.39 O
ATOM 17 N3 U B 7 2.565 -14.987 30.304 1.00 50.39 N
ATOM 18 C4 U B 7 1.647 -15.100 31.337 1.00 50.40 C
ATOM 19 O4 U B 7 2.039 -15.302 32.483 1.00 50.44 O
ATOM 20 C5 U B 7 0.267 -14.963 30.940 1.00 50.33 C
ATOM 21 C6 U B 7 -0.026 -14.743 29.652 1.00 50.34 C
ATOM 22 P U B 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 23 OP1 U B 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 24 OP2 U B 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 25 O5' U B 8 -0.806 -15.816 22.255 1.00 50.37 O
TER
ATOM 2 P U A 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 3 OP1 U A 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 4 OP2 U A 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 5 O5' U A 8 -0.806 -15.816 22.255 1.00 50.37 O
ATOM 6 C5' U A 8 0.270 -16.713 21.981 1.00 50.31 C
ATOM 7 C4' U A 8 -0.243 -18.050 21.467 1.00 50.26 C
ATOM 8 O4' U A 8 -1.259 -18.564 22.367 1.00 50.30 O
ATOM 9 C3' U A 8 -0.868 -18.023 20.071 1.00 50.21 C
ATOM 10 O3' U A 8 -0.246 -19.019 19.254 1.00 50.17 O
ATOM 11 C2' U A 8 -2.356 -18.299 20.315 1.00 50.18 C
ATOM 12 O2' U A 8 -2.964 -19.056 19.284 1.00 49.97 O
ATOM 13 C1' U A 8 -2.330 -19.097 21.618 1.00 50.20 C
ATOM 14 N1 U A 8 -3.592 -19.026 22.440 1.00 50.18 N
ATOM 15 C2 U A 8 -4.463 -20.106 22.448 1.00 50.16 C
ATOM 16 O2 U A 8 -4.280 -21.134 21.819 1.00 50.18 O
ATOM 17 N3 U A 8 -5.583 -19.943 23.232 1.00 50.13 N
ATOM 18 C4 U A 8 -5.915 -18.835 23.994 1.00 50.12 C
ATOM 19 O4 U A 8 -6.953 -18.837 24.645 1.00 50.09 O
ATOM 20 C5 U A 8 -4.964 -17.751 23.941 1.00 50.15 C
ATOM 21 C6 U A 8 -3.864 -17.886 23.184 1.00 50.19 C
ATOM 22 P C A 9 1.005 -18.682 18.304 1.00 50.13 P
ATOM 23 OP1 C A 9 1.648 -17.423 18.754 1.00 50.23 O
ATOM 24 OP2 C A 9 0.536 -18.789 16.902 1.00 50.03 O
ATOM 25 O5' C A 9 1.991 -19.918 18.581 1.00 49.92 O
TER
ATOM 1 O3' U B 6 -5.559 -14.590 25.719 1.00 50.17 O
ATOM 2 P U B 7 -4.916 -13.855 26.994 1.00 50.37 P
ATOM 3 OP1 U B 7 -5.220 -14.689 28.177 1.00 50.24 O
ATOM 4 OP2 U B 7 -5.316 -12.427 26.985 1.00 50.34 O
ATOM 5 O5' U B 7 -3.341 -13.987 26.729 1.00 50.47 O
ATOM 6 C5' U B 7 -2.545 -12.875 26.312 1.00 50.52 C
ATOM 7 C4' U B 7 -1.111 -13.289 26.003 1.00 50.49 C
ATOM 8 O4' U B 7 -0.307 -13.249 27.209 1.00 50.46 O
ATOM 9 C3' U B 7 -0.917 -14.689 25.416 1.00 50.46 C
ATOM 10 O3' U B 7 -0.024 -14.621 24.307 1.00 50.42 O
ATOM 11 C2' U B 7 -0.317 -15.477 26.579 1.00 50.46 C
ATOM 12 O2' U B 7 0.494 -16.550 26.149 1.00 50.46 O
ATOM 13 C1' U B 7 0.524 -14.391 27.242 1.00 50.44 C
ATOM 14 N1 U B 7 0.944 -14.645 28.665 1.00 50.45 N
ATOM 15 C2 U B 7 2.294 -14.764 28.974 1.00 50.42 C
ATOM 16 O2 U B 7 3.195 -14.685 28.155 1.00 50.39 O
ATOM 17 N3 U B 7 2.565 -14.987 30.304 1.00 50.39 N
ATOM 18 C4 U B 7 1.647 -15.100 31.337 1.00 50.40 C
ATOM 19 O4 U B 7 2.039 -15.302 32.483 1.00 50.44 O
ATOM 20 C5 U B 7 0.267 -14.963 30.940 1.00 50.33 C
ATOM 21 C6 U B 7 -0.026 -14.743 29.652 1.00 50.34 C
ATOM 22 P U B 8 -0.540 -14.340 22.817 1.00 50.36 P
ATOM 23 OP1 U B 8 0.581 -13.715 22.078 1.00 50.32 O
ATOM 24 OP2 U B 8 -1.847 -13.645 22.875 1.00 50.37 O
ATOM 25 O5' U B 8 -0.806 -15.816 22.255 1.00 50.37 O
TER
Atoms:
C4: (-5.915,-18.835,23.994)
N3: (-5.583,-19.943,23.232)
OP1: (0.581,-13.715,22.078)
OP2: (-1.847,-13.645,22.875)
C2: (-4.463,-20.106,22.448)
C1': (-2.330,-19.097,21.618)
C3': (-0.868,-18.023,20.071)
O5': (-0.806,-15.816,22.255)
O4': (-1.259,-18.564,22.367)
C5': (0.270,-16.713,21.981)
P: (-0.540,-14.340,22.817)
C4': (-0.243,-18.050,21.467)
C2': (-2.356,-18.299,20.315)
O2': (-2.964,-19.056,19.284)
N1: (-3.592,-19.026,22.440)
O4: (-6.953,-18.837,24.645)
O2: (-4.280,-21.134,21.819)
C6: (-3.864,-17.886,23.184)
C5: (-4.964,-17.751,23.941)
O3': (-0.246,-19.019,19.254)
N3: (-5.583,-19.943,23.232)
OP1: (0.581,-13.715,22.078)
OP2: (-1.847,-13.645,22.875)
C2: (-4.463,-20.106,22.448)
C1': (-2.330,-19.097,21.618)
C3': (-0.868,-18.023,20.071)
O5': (-0.806,-15.816,22.255)
O4': (-1.259,-18.564,22.367)
C5': (0.270,-16.713,21.981)
P: (-0.540,-14.340,22.817)
C4': (-0.243,-18.050,21.467)
C2': (-2.356,-18.299,20.315)
O2': (-2.964,-19.056,19.284)
N1: (-3.592,-19.026,22.440)
O4: (-6.953,-18.837,24.645)
O2: (-4.280,-21.134,21.819)
C6: (-3.864,-17.886,23.184)
C5: (-4.964,-17.751,23.941)
O3': (-0.246,-19.019,19.254)
C4: (1.647,-15.100,31.337)
N3: (2.565,-14.987,30.304)
OP1: (-5.220,-14.689,28.177)
OP2: (-5.316,-12.427,26.985)
C2: (2.294,-14.764,28.974)
C1': (0.524,-14.391,27.242)
C3': (-0.917,-14.689,25.416)
O5': (-3.341,-13.987,26.729)
O4': (-0.307,-13.249,27.209)
C5': (-2.545,-12.875,26.312)
P: (-4.916,-13.855,26.994)
C4': (-1.111,-13.289,26.003)
C2': (-0.317,-15.477,26.579)
O2': (0.494,-16.550,26.149)
N1: (0.944,-14.645,28.665)
O4: (2.039,-15.302,32.483)
O2: (3.195,-14.685,28.155)
C6: (-0.026,-14.743,29.652)
C5: (0.267,-14.963,30.940)
O3': (-0.024,-14.621,24.307)
N3: (2.565,-14.987,30.304)
OP1: (-5.220,-14.689,28.177)
OP2: (-5.316,-12.427,26.985)
C2: (2.294,-14.764,28.974)
C1': (0.524,-14.391,27.242)
C3': (-0.917,-14.689,25.416)
O5': (-3.341,-13.987,26.729)
O4': (-0.307,-13.249,27.209)
C5': (-2.545,-12.875,26.312)
P: (-4.916,-13.855,26.994)
C4': (-1.111,-13.289,26.003)
C2': (-0.317,-15.477,26.579)
O2': (0.494,-16.550,26.149)
N1: (0.944,-14.645,28.665)
O4: (2.039,-15.302,32.483)
O2: (3.195,-14.685,28.155)
C6: (-0.026,-14.743,29.652)
C5: (0.267,-14.963,30.940)
O3': (-0.024,-14.621,24.307)
Image (generated by PyMOL):