Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDI:S7:S6
Extra
PDB:
ATOM 1 O3' U A 6 -15.735 105.928 6.394 0.70 54.29 O
ATOM 2 P U A 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 3 OP1 U A 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 4 OP2 U A 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 5 O5' U A 7 -13.364 106.808 6.619 0.70 53.14 O
ATOM 6 C5' U A 7 -12.613 105.801 7.338 0.70 49.52 C
ATOM 7 C4' U A 7 -11.115 106.037 7.214 0.70 46.89 C
ATOM 8 O4' U A 7 -10.703 105.803 5.841 0.70 45.67 O
ATOM 9 C3' U A 7 -10.647 107.447 7.567 0.70 45.90 C
ATOM 10 O3' U A 7 -9.330 107.367 8.161 0.70 45.48 O
ATOM 11 C2' U A 7 -10.526 108.136 6.205 0.70 45.32 C
ATOM 12 O2' U A 7 -9.548 109.167 6.214 0.70 47.63 O
ATOM 13 C1' U A 7 -10.088 106.964 5.296 0.70 43.79 C
ATOM 14 N1 U A 7 -10.479 107.050 3.884 0.70 40.92 N
ATOM 15 C2 U A 7 -9.554 107.563 2.968 0.70 39.81 C
ATOM 16 O2 U A 7 -8.469 108.021 3.337 0.70 39.60 O
ATOM 17 N3 U A 7 -9.951 107.552 1.656 0.70 38.82 N
ATOM 18 C4 U A 7 -11.154 107.079 1.155 0.70 38.88 C
ATOM 19 O4 U A 7 -11.356 107.116 -0.075 0.70 39.29 O
ATOM 20 C5 U A 7 -12.070 106.587 2.142 0.70 38.30 C
ATOM 21 C6 U A 7 -11.712 106.582 3.440 0.70 39.47 C
ATOM 22 P A A 8 -9.171 107.122 9.751 0.70 43.19 P
ATOM 23 OP1 A A 8 -10.208 106.134 10.231 0.70 45.38 O
ATOM 24 OP2 A A 8 -9.053 108.442 10.441 0.70 43.78 O
ATOM 25 O5' A A 8 -7.714 106.474 9.848 0.70 42.99 O
TER
ATOM 1 O3' A B 5 -14.832 103.892 -0.054 0.70 54.89 O
ATOM 2 P U B 6 -15.525 105.230 0.520 0.70 57.14 P
ATOM 3 OP1 U B 6 -17.012 105.033 0.440 0.70 57.56 O
ATOM 4 OP2 U B 6 -14.846 106.454 -0.123 0.70 57.25 O
ATOM 5 O5' U B 6 -15.205 105.260 2.072 0.70 55.90 O
ATOM 6 C5' U B 6 -15.698 106.376 2.834 0.70 55.17 C
ATOM 7 C4' U B 6 -16.365 105.889 4.078 0.70 54.00 C
ATOM 8 O4' U B 6 -17.305 104.809 3.771 0.70 53.05 O
ATOM 9 C3' U B 6 -15.387 105.387 5.134 0.70 54.00 C
ATOM 10 O3' U B 6 -15.735 105.928 6.394 0.70 54.29 O
ATOM 11 C2' U B 6 -15.551 103.873 5.049 0.70 53.35 C
ATOM 12 O2' U B 6 -15.253 103.226 6.270 0.70 55.94 O
ATOM 13 C1' U B 6 -17.026 103.713 4.623 0.70 51.02 C
ATOM 14 N1 U B 6 -17.302 102.480 3.889 0.00 46.54 N
ATOM 15 C2 U B 6 -18.402 101.719 4.272 0.00 44.14 C
ATOM 16 O2 U B 6 -19.145 102.029 5.186 0.00 43.16 O
ATOM 17 N3 U B 6 -18.606 100.576 3.538 0.00 42.05 N
ATOM 18 C4 U B 6 -17.842 100.115 2.484 0.00 41.19 C
ATOM 19 O4 U B 6 -18.147 99.060 1.923 0.00 40.26 O
ATOM 20 C5 U B 6 -16.732 100.948 2.149 0.00 42.00 C
ATOM 21 C6 U B 6 -16.502 102.072 2.841 0.00 44.60 C
ATOM 22 P U B 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 23 OP1 U B 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 24 OP2 U B 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 25 O5' U B 7 -13.364 106.808 6.619 0.70 53.14 O
TER
ATOM 2 P U A 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 3 OP1 U A 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 4 OP2 U A 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 5 O5' U A 7 -13.364 106.808 6.619 0.70 53.14 O
ATOM 6 C5' U A 7 -12.613 105.801 7.338 0.70 49.52 C
ATOM 7 C4' U A 7 -11.115 106.037 7.214 0.70 46.89 C
ATOM 8 O4' U A 7 -10.703 105.803 5.841 0.70 45.67 O
ATOM 9 C3' U A 7 -10.647 107.447 7.567 0.70 45.90 C
ATOM 10 O3' U A 7 -9.330 107.367 8.161 0.70 45.48 O
ATOM 11 C2' U A 7 -10.526 108.136 6.205 0.70 45.32 C
ATOM 12 O2' U A 7 -9.548 109.167 6.214 0.70 47.63 O
ATOM 13 C1' U A 7 -10.088 106.964 5.296 0.70 43.79 C
ATOM 14 N1 U A 7 -10.479 107.050 3.884 0.70 40.92 N
ATOM 15 C2 U A 7 -9.554 107.563 2.968 0.70 39.81 C
ATOM 16 O2 U A 7 -8.469 108.021 3.337 0.70 39.60 O
ATOM 17 N3 U A 7 -9.951 107.552 1.656 0.70 38.82 N
ATOM 18 C4 U A 7 -11.154 107.079 1.155 0.70 38.88 C
ATOM 19 O4 U A 7 -11.356 107.116 -0.075 0.70 39.29 O
ATOM 20 C5 U A 7 -12.070 106.587 2.142 0.70 38.30 C
ATOM 21 C6 U A 7 -11.712 106.582 3.440 0.70 39.47 C
ATOM 22 P A A 8 -9.171 107.122 9.751 0.70 43.19 P
ATOM 23 OP1 A A 8 -10.208 106.134 10.231 0.70 45.38 O
ATOM 24 OP2 A A 8 -9.053 108.442 10.441 0.70 43.78 O
ATOM 25 O5' A A 8 -7.714 106.474 9.848 0.70 42.99 O
TER
ATOM 1 O3' A B 5 -14.832 103.892 -0.054 0.70 54.89 O
ATOM 2 P U B 6 -15.525 105.230 0.520 0.70 57.14 P
ATOM 3 OP1 U B 6 -17.012 105.033 0.440 0.70 57.56 O
ATOM 4 OP2 U B 6 -14.846 106.454 -0.123 0.70 57.25 O
ATOM 5 O5' U B 6 -15.205 105.260 2.072 0.70 55.90 O
ATOM 6 C5' U B 6 -15.698 106.376 2.834 0.70 55.17 C
ATOM 7 C4' U B 6 -16.365 105.889 4.078 0.70 54.00 C
ATOM 8 O4' U B 6 -17.305 104.809 3.771 0.70 53.05 O
ATOM 9 C3' U B 6 -15.387 105.387 5.134 0.70 54.00 C
ATOM 10 O3' U B 6 -15.735 105.928 6.394 0.70 54.29 O
ATOM 11 C2' U B 6 -15.551 103.873 5.049 0.70 53.35 C
ATOM 12 O2' U B 6 -15.253 103.226 6.270 0.70 55.94 O
ATOM 13 C1' U B 6 -17.026 103.713 4.623 0.70 51.02 C
ATOM 14 N1 U B 6 -17.302 102.480 3.889 0.00 46.54 N
ATOM 15 C2 U B 6 -18.402 101.719 4.272 0.00 44.14 C
ATOM 16 O2 U B 6 -19.145 102.029 5.186 0.00 43.16 O
ATOM 17 N3 U B 6 -18.606 100.576 3.538 0.00 42.05 N
ATOM 18 C4 U B 6 -17.842 100.115 2.484 0.00 41.19 C
ATOM 19 O4 U B 6 -18.147 99.060 1.923 0.00 40.26 O
ATOM 20 C5 U B 6 -16.732 100.948 2.149 0.00 42.00 C
ATOM 21 C6 U B 6 -16.502 102.072 2.841 0.00 44.60 C
ATOM 22 P U B 7 -14.885 107.155 7.001 0.70 55.06 P
ATOM 23 OP1 U B 7 -15.017 107.044 8.519 0.70 56.08 O
ATOM 24 OP2 U B 7 -15.301 108.448 6.298 0.70 53.39 O
ATOM 25 O5' U B 7 -13.364 106.808 6.619 0.70 53.14 O
TER
Atoms:
C4: (-11.154,107.079,1.155)
N3: (-9.951,107.552,1.656)
OP1: (-15.017,107.044,8.519)
OP2: (-15.301,108.448,6.298)
C2: (-9.554,107.563,2.968)
C1': (-10.088,106.964,5.296)
C3': (-10.647,107.447,7.567)
O5': (-13.364,106.808,6.619)
O4': (-10.703,105.803,5.841)
C5': (-12.613,105.801,7.338)
P: (-14.885,107.155,7.001)
C4': (-11.115,106.037,7.214)
C2': (-10.526,108.136,6.205)
O2': (-9.548,109.167,6.214)
N1: (-10.479,107.050,3.884)
O4: (-11.356,107.116,-0.075)
O2: (-8.469,108.021,3.337)
C6: (-11.712,106.582,3.440)
C5: (-12.070,106.587,2.142)
O3': (-9.330,107.367,8.161)
N3: (-9.951,107.552,1.656)
OP1: (-15.017,107.044,8.519)
OP2: (-15.301,108.448,6.298)
C2: (-9.554,107.563,2.968)
C1': (-10.088,106.964,5.296)
C3': (-10.647,107.447,7.567)
O5': (-13.364,106.808,6.619)
O4': (-10.703,105.803,5.841)
C5': (-12.613,105.801,7.338)
P: (-14.885,107.155,7.001)
C4': (-11.115,106.037,7.214)
C2': (-10.526,108.136,6.205)
O2': (-9.548,109.167,6.214)
N1: (-10.479,107.050,3.884)
O4: (-11.356,107.116,-0.075)
O2: (-8.469,108.021,3.337)
C6: (-11.712,106.582,3.440)
C5: (-12.070,106.587,2.142)
O3': (-9.330,107.367,8.161)
C4: (-17.842,100.115,2.484)
N3: (-18.606,100.576,3.538)
OP1: (-17.012,105.033,0.440)
OP2: (-14.846,106.454,-0.123)
C2: (-18.402,101.719,4.272)
C1': (-17.026,103.713,4.623)
C3': (-15.387,105.387,5.134)
O5': (-15.205,105.260,2.072)
O4': (-17.305,104.809,3.771)
C5': (-15.698,106.376,2.834)
P: (-15.525,105.230,0.520)
C4': (-16.365,105.889,4.078)
C2': (-15.551,103.873,5.049)
O2': (-15.253,103.226,6.270)
N1: (-17.302,102.480,3.889)
O4: (-18.147,99.060,1.923)
O2: (-19.145,102.029,5.186)
C6: (-16.502,102.072,2.841)
C5: (-16.732,100.948,2.149)
O3': (-15.735,105.928,6.394)
N3: (-18.606,100.576,3.538)
OP1: (-17.012,105.033,0.440)
OP2: (-14.846,106.454,-0.123)
C2: (-18.402,101.719,4.272)
C1': (-17.026,103.713,4.623)
C3': (-15.387,105.387,5.134)
O5': (-15.205,105.260,2.072)
O4': (-17.305,104.809,3.771)
C5': (-15.698,106.376,2.834)
P: (-15.525,105.230,0.520)
C4': (-16.365,105.889,4.078)
C2': (-15.551,103.873,5.049)
O2': (-15.253,103.226,6.270)
N1: (-17.302,102.480,3.889)
O4: (-18.147,99.060,1.923)
O2: (-19.145,102.029,5.186)
C6: (-16.502,102.072,2.841)
C5: (-16.732,100.948,2.149)
O3': (-15.735,105.928,6.394)
Image (generated by PyMOL):