Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BQ5:S9:S8
Extra
PDB:
ATOM 1 O3' U A 8 -15.425 104.705 6.900 0.50 38.12 O
ATOM 2 P U A 9 -14.972 106.081 7.575 0.50 37.84 P
ATOM 3 OP1 U A 9 -15.102 105.908 9.044 0.50 37.75 O
ATOM 4 OP2 U A 9 -15.720 107.164 6.888 0.50 37.28 O
ATOM 5 O5' U A 9 -13.427 106.210 7.210 0.50 36.39 O
ATOM 6 C5' U A 9 -12.455 105.413 7.875 0.50 34.75 C
ATOM 7 C4' U A 9 -11.066 105.905 7.548 0.50 34.12 C
ATOM 8 O4' U A 9 -10.852 105.725 6.123 0.50 33.32 O
ATOM 9 C3' U A 9 -10.829 107.385 7.834 0.50 33.78 C
ATOM 10 O3' U A 9 -9.604 107.548 8.537 0.50 35.44 O
ATOM 11 C2' U A 9 -10.800 108.031 6.451 0.50 32.79 C
ATOM 12 O2' U A 9 -9.919 109.136 6.422 0.50 32.97 O
ATOM 13 C1' U A 9 -10.274 106.890 5.584 0.50 31.69 C
ATOM 14 N1 U A 9 -10.648 106.962 4.163 0.50 29.84 N
ATOM 15 C2 U A 9 -9.736 107.517 3.285 0.50 29.34 C
ATOM 16 O2 U A 9 -8.660 107.968 3.644 0.50 29.51 O
ATOM 17 N3 U A 9 -10.125 107.518 1.966 0.50 28.56 N
ATOM 18 C4 U A 9 -11.308 107.035 1.449 0.50 28.24 C
ATOM 19 O4 U A 9 -11.488 107.053 0.228 0.50 27.32 O
ATOM 20 C5 U A 9 -12.208 106.494 2.424 0.50 28.44 C
ATOM 21 C6 U A 9 -11.856 106.479 3.716 0.50 28.98 C
ATOM 22 P A A 10 -9.496 107.076 10.068 0.50 36.29 P
ATOM 23 OP1 A A 10 -10.865 106.816 10.577 0.50 36.52 O
ATOM 24 OP2 A A 10 -8.606 108.018 10.794 0.50 35.81 O
ATOM 25 O5' A A 10 -8.739 105.682 9.979 0.50 36.62 O
TER
ATOM 1 O3' A B 7 -15.257 103.679 0.268 0.50 40.96 O
ATOM 2 P U B 8 -15.983 104.923 0.975 0.50 41.13 P
ATOM 3 OP1 U B 8 -17.446 104.691 0.912 0.50 40.28 O
ATOM 4 OP2 U B 8 -15.405 106.158 0.382 0.50 40.97 O
ATOM 5 O5' U B 8 -15.554 104.849 2.507 0.50 40.14 O
ATOM 6 C5' U B 8 -16.200 105.682 3.469 0.50 39.48 C
ATOM 7 C4' U B 8 -16.458 104.918 4.745 0.50 39.45 C
ATOM 8 O4' U B 8 -17.143 103.684 4.396 0.50 40.31 O
ATOM 9 C3' U B 8 -15.209 104.495 5.516 0.50 39.41 C
ATOM 10 O3' U B 8 -15.425 104.705 6.900 0.50 38.12 O
ATOM 11 C2' U B 8 -15.086 103.009 5.220 0.50 40.04 C
ATOM 12 O2' U B 8 -14.466 102.293 6.266 0.50 39.61 O
ATOM 13 C1' U B 8 -16.550 102.616 5.100 0.50 40.88 C
ATOM 14 N1 U B 8 -16.745 101.375 4.343 0.50 42.62 N
ATOM 15 C2 U B 8 -17.006 100.232 5.067 0.50 42.98 C
ATOM 16 O2 U B 8 -17.095 100.228 6.282 0.50 42.85 O
ATOM 17 N3 U B 8 -17.162 99.095 4.317 0.50 43.68 N
ATOM 18 C4 U B 8 -17.088 98.991 2.944 0.50 43.96 C
ATOM 19 O4 U B 8 -17.250 97.892 2.412 0.50 44.61 O
ATOM 20 C5 U B 8 -16.820 100.224 2.264 0.50 43.54 C
ATOM 21 C6 U B 8 -16.663 101.347 2.971 0.50 43.24 C
ATOM 22 P U B 9 -14.972 106.081 7.575 0.50 37.84 P
ATOM 23 OP1 U B 9 -15.102 105.908 9.044 0.50 37.75 O
ATOM 24 OP2 U B 9 -15.720 107.164 6.888 0.50 37.28 O
ATOM 25 O5' U B 9 -13.427 106.210 7.210 0.50 36.39 O
TER
ATOM 2 P U A 9 -14.972 106.081 7.575 0.50 37.84 P
ATOM 3 OP1 U A 9 -15.102 105.908 9.044 0.50 37.75 O
ATOM 4 OP2 U A 9 -15.720 107.164 6.888 0.50 37.28 O
ATOM 5 O5' U A 9 -13.427 106.210 7.210 0.50 36.39 O
ATOM 6 C5' U A 9 -12.455 105.413 7.875 0.50 34.75 C
ATOM 7 C4' U A 9 -11.066 105.905 7.548 0.50 34.12 C
ATOM 8 O4' U A 9 -10.852 105.725 6.123 0.50 33.32 O
ATOM 9 C3' U A 9 -10.829 107.385 7.834 0.50 33.78 C
ATOM 10 O3' U A 9 -9.604 107.548 8.537 0.50 35.44 O
ATOM 11 C2' U A 9 -10.800 108.031 6.451 0.50 32.79 C
ATOM 12 O2' U A 9 -9.919 109.136 6.422 0.50 32.97 O
ATOM 13 C1' U A 9 -10.274 106.890 5.584 0.50 31.69 C
ATOM 14 N1 U A 9 -10.648 106.962 4.163 0.50 29.84 N
ATOM 15 C2 U A 9 -9.736 107.517 3.285 0.50 29.34 C
ATOM 16 O2 U A 9 -8.660 107.968 3.644 0.50 29.51 O
ATOM 17 N3 U A 9 -10.125 107.518 1.966 0.50 28.56 N
ATOM 18 C4 U A 9 -11.308 107.035 1.449 0.50 28.24 C
ATOM 19 O4 U A 9 -11.488 107.053 0.228 0.50 27.32 O
ATOM 20 C5 U A 9 -12.208 106.494 2.424 0.50 28.44 C
ATOM 21 C6 U A 9 -11.856 106.479 3.716 0.50 28.98 C
ATOM 22 P A A 10 -9.496 107.076 10.068 0.50 36.29 P
ATOM 23 OP1 A A 10 -10.865 106.816 10.577 0.50 36.52 O
ATOM 24 OP2 A A 10 -8.606 108.018 10.794 0.50 35.81 O
ATOM 25 O5' A A 10 -8.739 105.682 9.979 0.50 36.62 O
TER
ATOM 1 O3' A B 7 -15.257 103.679 0.268 0.50 40.96 O
ATOM 2 P U B 8 -15.983 104.923 0.975 0.50 41.13 P
ATOM 3 OP1 U B 8 -17.446 104.691 0.912 0.50 40.28 O
ATOM 4 OP2 U B 8 -15.405 106.158 0.382 0.50 40.97 O
ATOM 5 O5' U B 8 -15.554 104.849 2.507 0.50 40.14 O
ATOM 6 C5' U B 8 -16.200 105.682 3.469 0.50 39.48 C
ATOM 7 C4' U B 8 -16.458 104.918 4.745 0.50 39.45 C
ATOM 8 O4' U B 8 -17.143 103.684 4.396 0.50 40.31 O
ATOM 9 C3' U B 8 -15.209 104.495 5.516 0.50 39.41 C
ATOM 10 O3' U B 8 -15.425 104.705 6.900 0.50 38.12 O
ATOM 11 C2' U B 8 -15.086 103.009 5.220 0.50 40.04 C
ATOM 12 O2' U B 8 -14.466 102.293 6.266 0.50 39.61 O
ATOM 13 C1' U B 8 -16.550 102.616 5.100 0.50 40.88 C
ATOM 14 N1 U B 8 -16.745 101.375 4.343 0.50 42.62 N
ATOM 15 C2 U B 8 -17.006 100.232 5.067 0.50 42.98 C
ATOM 16 O2 U B 8 -17.095 100.228 6.282 0.50 42.85 O
ATOM 17 N3 U B 8 -17.162 99.095 4.317 0.50 43.68 N
ATOM 18 C4 U B 8 -17.088 98.991 2.944 0.50 43.96 C
ATOM 19 O4 U B 8 -17.250 97.892 2.412 0.50 44.61 O
ATOM 20 C5 U B 8 -16.820 100.224 2.264 0.50 43.54 C
ATOM 21 C6 U B 8 -16.663 101.347 2.971 0.50 43.24 C
ATOM 22 P U B 9 -14.972 106.081 7.575 0.50 37.84 P
ATOM 23 OP1 U B 9 -15.102 105.908 9.044 0.50 37.75 O
ATOM 24 OP2 U B 9 -15.720 107.164 6.888 0.50 37.28 O
ATOM 25 O5' U B 9 -13.427 106.210 7.210 0.50 36.39 O
TER
Atoms:
C4: (-11.308,107.035,1.449)
N3: (-10.125,107.518,1.966)
OP1: (-15.102,105.908,9.044)
OP2: (-15.720,107.164,6.888)
C2: (-9.736,107.517,3.285)
C1': (-10.274,106.890,5.584)
C3': (-10.829,107.385,7.834)
O5': (-13.427,106.210,7.210)
O4': (-10.852,105.725,6.123)
C5': (-12.455,105.413,7.875)
P: (-14.972,106.081,7.575)
C4': (-11.066,105.905,7.548)
C2': (-10.800,108.031,6.451)
O2': (-9.919,109.136,6.422)
N1: (-10.648,106.962,4.163)
O4: (-11.488,107.053,0.228)
O2: (-8.660,107.968,3.644)
C6: (-11.856,106.479,3.716)
C5: (-12.208,106.494,2.424)
O3': (-9.604,107.548,8.537)
N3: (-10.125,107.518,1.966)
OP1: (-15.102,105.908,9.044)
OP2: (-15.720,107.164,6.888)
C2: (-9.736,107.517,3.285)
C1': (-10.274,106.890,5.584)
C3': (-10.829,107.385,7.834)
O5': (-13.427,106.210,7.210)
O4': (-10.852,105.725,6.123)
C5': (-12.455,105.413,7.875)
P: (-14.972,106.081,7.575)
C4': (-11.066,105.905,7.548)
C2': (-10.800,108.031,6.451)
O2': (-9.919,109.136,6.422)
N1: (-10.648,106.962,4.163)
O4: (-11.488,107.053,0.228)
O2: (-8.660,107.968,3.644)
C6: (-11.856,106.479,3.716)
C5: (-12.208,106.494,2.424)
O3': (-9.604,107.548,8.537)
C4: (-17.088,98.991,2.944)
N3: (-17.162,99.095,4.317)
OP1: (-17.446,104.691,0.912)
OP2: (-15.405,106.158,0.382)
C2: (-17.006,100.232,5.067)
C1': (-16.550,102.616,5.100)
C3': (-15.209,104.495,5.516)
O5': (-15.554,104.849,2.507)
O4': (-17.143,103.684,4.396)
C5': (-16.200,105.682,3.469)
P: (-15.983,104.923,0.975)
C4': (-16.458,104.918,4.745)
C2': (-15.086,103.009,5.220)
O2': (-14.466,102.293,6.266)
N1: (-16.745,101.375,4.343)
O4: (-17.250,97.892,2.412)
O2: (-17.095,100.228,6.282)
C6: (-16.663,101.347,2.971)
C5: (-16.820,100.224,2.264)
O3': (-15.425,104.705,6.900)
N3: (-17.162,99.095,4.317)
OP1: (-17.446,104.691,0.912)
OP2: (-15.405,106.158,0.382)
C2: (-17.006,100.232,5.067)
C1': (-16.550,102.616,5.100)
C3': (-15.209,104.495,5.516)
O5': (-15.554,104.849,2.507)
O4': (-17.143,103.684,4.396)
C5': (-16.200,105.682,3.469)
P: (-15.983,104.923,0.975)
C4': (-16.458,104.918,4.745)
C2': (-15.086,103.009,5.220)
O2': (-14.466,102.293,6.266)
N1: (-16.745,101.375,4.343)
O4: (-17.250,97.892,2.412)
O2: (-17.095,100.228,6.282)
C6: (-16.663,101.347,2.971)
C5: (-16.820,100.224,2.264)
O3': (-15.425,104.705,6.900)
Image (generated by PyMOL):